EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000010465 (Gene tree)
Gene ID: -
Gene Symbol: smg5
Alias: -
Full Name: SMG5 nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 13889 bases
Position: chrKN461046.1:26589-40477
Accession: ZDB-GENE-050913-144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000012694	EST1	PF10374.9	6.4e-23	1	1
ENSPMGP00000012694	EST1_DNA_bind	PF10373.9	1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000013542	-	3207	-	ENSPMGP00000012694	1068 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000010465's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000010465's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000010465	smg5	99	59.871	ENSG00000198952	SMG5	99	60.331	Homo_sapiens
ENSPMGG00000010465	smg5	100	72.248	ENSAPOG00000019690	smg5	100	72.832	Acanthochromis_polyacanthus
ENSPMGG00000010465	smg5	98	59.568	ENSAMEG00000014458	SMG5	100	60.244	Ailuropoda_melanoleuca
ENSPMGG00000010465	smg5	100	71.807	ENSACIG00000001353	smg5	99	72.329	Amphilophus_citrinellus
ENSPMGG00000010465	smg5	100	72.808	ENSAOCG00000019483	smg5	100	73.316	Amphiprion_ocellaris
ENSPMGG00000010465	smg5	100	72.631	ENSAPEG00000022949	smg5	100	73.227	Amphiprion_percula
ENSPMGG00000010465	smg5	100	72.232	ENSATEG00000005348	smg5	100	72.727	Anabas_testudineus
ENSPMGG00000010465	smg5	98	61.496	ENSAPLG00000010263	SMG5	100	61.009	Anas_platyrhynchos
ENSPMGG00000010465	smg5	99	60.721	ENSANAG00000032899	SMG5	99	60.422	Aotus_nancymaae
ENSPMGG00000010465	smg5	100	71.454	ENSACLG00000009311	smg5	100	72.291	Astatotilapia_calliptera
ENSPMGG00000010465	smg5	100	71.223	ENSAMXG00000024616	smg5	100	72.137	Astyanax_mexicanus
ENSPMGG00000010465	smg5	99	60.718	ENSBTAG00000009435	SMG5	99	61.127	Bos_taurus
ENSPMGG00000010465	smg5	99	37.075	ENSBTAG00000021747	-	97	48.687	Bos_taurus
ENSPMGG00000010465	smg5	99	60.628	ENSCJAG00000005684	SMG5	99	60.331	Callithrix_jacchus
ENSPMGG00000010465	smg5	99	59.871	ENSCAFG00000016839	SMG5	99	60.313	Canis_familiaris
ENSPMGG00000010465	smg5	99	59.871	ENSCAFG00020006061	SMG5	99	60.313	Canis_lupus_dingo
ENSPMGG00000010465	smg5	99	60.444	ENSCHIG00000007709	SMG5	99	61.106	Capra_hircus
ENSPMGG00000010465	smg5	98	37.207	ENSCHIG00000006323	-	96	50.503	Capra_hircus
ENSPMGG00000010465	smg5	99	60.258	ENSTSYG00000004099	SMG5	99	60.313	Carlito_syrichta
ENSPMGG00000010465	smg5	95	48.202	ENSCAPG00000003631	SMG5	100	48.497	Cavia_aperea
ENSPMGG00000010465	smg5	99	60.534	ENSCPOG00000015696	SMG5	99	60.938	Cavia_porcellus
ENSPMGG00000010465	smg5	99	60.628	ENSCCAG00000027409	SMG5	99	60.331	Cebus_capucinus
ENSPMGG00000010465	smg5	99	60.962	ENSCATG00000030539	SMG5	99	60.478	Cercocebus_atys
ENSPMGG00000010465	smg5	99	60.882	ENSCLAG00000003983	SMG5	99	60.476	Chinchilla_lanigera
ENSPMGG00000010465	smg5	99	60.813	ENSCSAG00000002120	SMG5	99	60.422	Chlorocebus_sabaeus
ENSPMGG00000010465	smg5	52	72.563	ENSCHOG00000008741	-	57	72.563	Choloepus_hoffmanni
ENSPMGG00000010465	smg5	94	60.229	ENSCPBG00000025848	SMG5	100	60.861	Chrysemys_picta_bellii
ENSPMGG00000010465	smg5	75	38.500	ENSCING00000008706	-	98	30.747	Ciona_intestinalis
ENSPMGG00000010465	smg5	99	57.380	ENSCANG00000029208	SMG5	99	57.851	Colobus_angolensis_palliatus
ENSPMGG00000010465	smg5	99	59.381	ENSCGRG00001006336	Smg5	99	61.270	Cricetulus_griseus_chok1gshd
ENSPMGG00000010465	smg5	98	59.352	ENSCGRG00000005111	Smg5	99	61.272	Cricetulus_griseus_crigri
ENSPMGG00000010465	smg5	100	70.337	ENSCSEG00000014220	smg5	100	70.703	Cynoglossus_semilaevis
ENSPMGG00000010465	smg5	100	64.852	ENSCVAG00000000529	smg5	99	64.668	Cyprinodon_variegatus
ENSPMGG00000010465	smg5	100	70.609	ENSDARG00000041481	smg5	100	70.404	Danio_rerio
ENSPMGG00000010465	smg5	85	36.842	ENSDNOG00000039862	-	95	36.842	Dasypus_novemcinctus
ENSPMGG00000010465	smg5	99	58.379	ENSDNOG00000000051	SMG5	99	57.982	Dasypus_novemcinctus
ENSPMGG00000010465	smg5	99	60.350	ENSDORG00000010382	Smg5	99	60.275	Dipodomys_ordii
ENSPMGG00000010465	smg5	70	82.524	ENSETEG00000010336	SMG5	76	82.524	Echinops_telfairi
ENSPMGG00000010465	smg5	91	42.974	ENSEBUG00000003739	smg5	98	44.365	Eptatretus_burgeri
ENSPMGG00000010465	smg5	99	59.889	ENSEASG00005019122	SMG5	99	60.534	Equus_asinus_asinus
ENSPMGG00000010465	smg5	99	59.889	ENSECAG00000001389	SMG5	99	60.534	Equus_caballus
ENSPMGG00000010465	smg5	67	76.353	ENSEEUG00000012690	SMG5	75	76.353	Erinaceus_europaeus
ENSPMGG00000010465	smg5	100	71.786	ENSELUG00000012585	smg5	100	71.786	Esox_lucius
ENSPMGG00000010465	smg5	99	59.907	ENSFCAG00000011783	SMG5	99	60.037	Felis_catus
ENSPMGG00000010465	smg5	59	64.818	ENSFALG00000001166	-	96	64.650	Ficedula_albicollis
ENSPMGG00000010465	smg5	98	60.654	ENSFDAG00000017388	SMG5	100	60.918	Fukomys_damarensis
ENSPMGG00000010465	smg5	95	68.077	ENSFHEG00000013939	smg5	98	68.137	Fundulus_heteroclitus
ENSPMGG00000010465	smg5	100	69.386	ENSGMOG00000007310	smg5	100	69.886	Gadus_morhua
ENSPMGG00000010465	smg5	99	60.345	ENSGALG00000029918	-	99	59.732	Gallus_gallus
ENSPMGG00000010465	smg5	100	67.628	ENSGAFG00000021691	smg5	99	78.797	Gambusia_affinis
ENSPMGG00000010465	smg5	100	71.250	ENSGACG00000013142	smg5	100	71.339	Gasterosteus_aculeatus
ENSPMGG00000010465	smg5	99	61.922	ENSGAGG00000016131	SMG5	99	61.483	Gopherus_agassizii
ENSPMGG00000010465	smg5	99	59.686	ENSGGOG00000010932	SMG5	99	60.239	Gorilla_gorilla
ENSPMGG00000010465	smg5	100	71.656	ENSHBUG00000008654	smg5	100	72.784	Haplochromis_burtoni
ENSPMGG00000010465	smg5	99	60.478	ENSHGLG00000019152	SMG5	99	60.606	Heterocephalus_glaber_female
ENSPMGG00000010465	smg5	90	60.203	ENSHGLG00100015948	SMG5	99	60.345	Heterocephalus_glaber_male
ENSPMGG00000010465	smg5	83	80.896	ENSHCOG00000010229	smg5	93	80.896	Hippocampus_comes
ENSPMGG00000010465	smg5	100	69.581	ENSIPUG00000006624	Smg5	100	70.662	Ictalurus_punctatus
ENSPMGG00000010465	smg5	99	60.332	ENSSTOG00000001780	SMG5	99	61.935	Ictidomys_tridecemlineatus
ENSPMGG00000010465	smg5	99	60.166	ENSJJAG00000022763	Smg5	99	60.478	Jaculus_jaculus
ENSPMGG00000010465	smg5	100	71.972	ENSKMAG00000014586	smg5	100	72.405	Kryptolebias_marmoratus
ENSPMGG00000010465	smg5	100	72.267	ENSLBEG00000002145	smg5	100	73.310	Labrus_bergylta
ENSPMGG00000010465	smg5	99	54.242	ENSLACG00000010521	SMG5	99	54.595	Latimeria_chalumnae
ENSPMGG00000010465	smg5	99	60.556	ENSLAFG00000006241	SMG5	99	60.500	Loxodonta_africana
ENSPMGG00000010465	smg5	99	60.813	ENSMFAG00000045357	SMG5	99	60.422	Macaca_fascicularis
ENSPMGG00000010465	smg5	99	60.813	ENSMMUG00000000090	SMG5	99	60.422	Macaca_mulatta
ENSPMGG00000010465	smg5	99	60.628	ENSMNEG00000044425	SMG5	99	60.331	Macaca_nemestrina
ENSPMGG00000010465	smg5	99	57.077	ENSMLEG00000041192	SMG5	99	56.710	Mandrillus_leucophaeus
ENSPMGG00000010465	smg5	100	71.492	ENSMAMG00000010683	smg5	100	72.242	Mastacembelus_armatus
ENSPMGG00000010465	smg5	100	68.244	ENSMZEG00005015815	smg5	99	68.556	Maylandia_zebra
ENSPMGG00000010465	smg5	64	63.099	ENSMZEG00005016543	smg5	100	63.521	Maylandia_zebra
ENSPMGG00000010465	smg5	99	59.871	ENSMAUG00000010381	Smg5	99	59.219	Mesocricetus_auratus
ENSPMGG00000010465	smg5	99	60.424	ENSMICG00000002257	SMG5	99	61.418	Microcebus_murinus
ENSPMGG00000010465	smg5	99	60.184	ENSMOCG00000016590	Smg5	99	60.239	Microtus_ochrogaster
ENSPMGG00000010465	smg5	100	70.133	ENSMMOG00000017199	smg5	100	70.740	Mola_mola
ENSPMGG00000010465	smg5	88	59.395	ENSMODG00000016901	SMG5	98	59.252	Monodelphis_domestica
ENSPMGG00000010465	smg5	76	32.908	ENSMODG00000010675	-	84	34.109	Monodelphis_domestica
ENSPMGG00000010465	smg5	74	33.813	ENSMODG00000004532	-	88	33.813	Monodelphis_domestica
ENSPMGG00000010465	smg5	74	33.333	ENSMODG00000004735	-	89	33.243	Monodelphis_domestica
ENSPMGG00000010465	smg5	100	71.251	ENSMALG00000010375	smg5	100	71.352	Monopterus_albus
ENSPMGG00000010465	smg5	99	60.589	MGP_CAROLIEiJ_G0025163	Smg5	100	83.799	Mus_caroli
ENSPMGG00000010465	smg5	99	60.497	ENSMUSG00000001415	Smg5	99	83.799	Mus_musculus
ENSPMGG00000010465	smg5	99	60.609	MGP_PahariEiJ_G0026606	Smg5	100	84.358	Mus_pahari
ENSPMGG00000010465	smg5	99	60.773	MGP_SPRETEiJ_G0026104	Smg5	100	83.799	Mus_spretus
ENSPMGG00000010465	smg5	94	57.910	ENSMPUG00000004546	SMG5	100	59.274	Mustela_putorius_furo
ENSPMGG00000010465	smg5	99	60.942	ENSMLUG00000008518	SMG5	99	61.014	Myotis_lucifugus
ENSPMGG00000010465	smg5	99	59.797	ENSNGAG00000020706	Smg5	99	60.612	Nannospalax_galili
ENSPMGG00000010465	smg5	97	68.827	ENSNBRG00000004332	smg5	98	69.216	Neolamprologus_brichardi
ENSPMGG00000010465	smg5	99	59.596	ENSNLEG00000012439	SMG5	99	60.424	Nomascus_leucogenys
ENSPMGG00000010465	smg5	99	58.786	ENSMEUG00000012834	SMG5	99	58.456	Notamacropus_eugenii
ENSPMGG00000010465	smg5	99	59.798	ENSOPRG00000009152	SMG5	99	59.834	Ochotona_princeps
ENSPMGG00000010465	smg5	99	60.055	ENSODEG00000012237	SMG5	99	60.737	Octodon_degus
ENSPMGG00000010465	smg5	100	71.731	ENSONIG00000008632	smg5	100	72.429	Oreochromis_niloticus
ENSPMGG00000010465	smg5	98	59.718	ENSOCUG00000012886	SMG5	100	60.169	Oryctolagus_cuniculus
ENSPMGG00000010465	smg5	90	33.232	ENSOCUG00000023338	-	91	43.970	Oryctolagus_cuniculus
ENSPMGG00000010465	smg5	100	70.000	ENSORLG00000016239	smg5	100	71.159	Oryzias_latipes
ENSPMGG00000010465	smg5	100	70.063	ENSORLG00020013127	smg5	100	71.364	Oryzias_latipes_hni
ENSPMGG00000010465	smg5	100	69.973	ENSORLG00015019014	smg5	100	71.069	Oryzias_latipes_hsok
ENSPMGG00000010465	smg5	83	69.362	ENSOMEG00000021330	smg5	92	75.056	Oryzias_melastigma
ENSPMGG00000010465	smg5	99	59.208	ENSOGAG00000004966	SMG5	99	60.184	Otolemur_garnettii
ENSPMGG00000010465	smg5	99	60.351	ENSOARG00000005778	SMG5	99	61.014	Ovis_aries
ENSPMGG00000010465	smg5	99	37.477	ENSOARG00000011963	-	97	49.522	Ovis_aries
ENSPMGG00000010465	smg5	99	59.686	ENSPPAG00000011996	SMG5	99	60.331	Pan_paniscus
ENSPMGG00000010465	smg5	98	59.605	ENSPPRG00000011901	SMG5	100	59.831	Panthera_pardus
ENSPMGG00000010465	smg5	97	56.731	ENSPTIG00000007892	SMG5	98	56.964	Panthera_tigris_altaica
ENSPMGG00000010465	smg5	99	59.779	ENSPTRG00000023925	SMG5	99	60.331	Pan_troglodytes
ENSPMGG00000010465	smg5	87	76.136	ENSPTRG00000049282	-	86	76.136	Pan_troglodytes
ENSPMGG00000010465	smg5	99	60.813	ENSPANG00000011201	SMG5	99	60.422	Papio_anubis
ENSPMGG00000010465	smg5	100	69.640	ENSPKIG00000009402	smg5	100	69.569	Paramormyrops_kingsleyae
ENSPMGG00000010465	smg5	98	62.395	ENSPSIG00000015198	SMG5	100	60.536	Pelodiscus_sinensis
ENSPMGG00000010465	smg5	99	59.107	ENSPEMG00000001819	Smg5	99	59.582	Peromyscus_maniculatus_bairdii
ENSPMGG00000010465	smg5	99	59.797	ENSPCIG00000018938	SMG5	99	59.761	Phascolarctos_cinereus
ENSPMGG00000010465	smg5	100	71.825	ENSPFOG00000010191	smg5	100	72.103	Poecilia_formosa
ENSPMGG00000010465	smg5	100	71.811	ENSPLAG00000009332	smg5	100	72.178	Poecilia_latipinna
ENSPMGG00000010465	smg5	100	71.914	ENSPMEG00000014105	smg5	100	72.193	Poecilia_mexicana
ENSPMGG00000010465	smg5	100	71.365	ENSPREG00000017713	smg5	100	72.316	Poecilia_reticulata
ENSPMGG00000010465	smg5	99	59.963	ENSPPYG00000000723	SMG5	99	60.422	Pongo_abelii
ENSPMGG00000010465	smg5	75	81.111	ENSPCAG00000008412	SMG5	78	81.111	Procavia_capensis
ENSPMGG00000010465	smg5	99	59.761	ENSPCOG00000004741	SMG5	99	60.275	Propithecus_coquereli
ENSPMGG00000010465	smg5	99	54.454	ENSPVAG00000016748	SMG5	99	55.032	Pteropus_vampyrus
ENSPMGG00000010465	smg5	100	71.770	ENSPNYG00000013397	smg5	100	72.703	Pundamilia_nyererei
ENSPMGG00000010465	smg5	100	71.390	ENSPNAG00000028363	smg5	100	71.737	Pygocentrus_nattereri
ENSPMGG00000010465	smg5	99	60.055	ENSRNOG00000019590	Smg5	99	59.673	Rattus_norvegicus
ENSPMGG00000010465	smg5	99	60.906	ENSRBIG00000027428	SMG5	99	60.514	Rhinopithecus_bieti
ENSPMGG00000010465	smg5	99	60.813	ENSRROG00000030035	SMG5	99	60.422	Rhinopithecus_roxellana
ENSPMGG00000010465	smg5	99	60.813	ENSSBOG00000033339	SMG5	99	60.514	Saimiri_boliviensis_boliviensis
ENSPMGG00000010465	smg5	98	59.477	ENSSHAG00000014163	SMG5	100	59.777	Sarcophilus_harrisii
ENSPMGG00000010465	smg5	71	41.071	ENSSHAG00000009572	-	78	41.071	Sarcophilus_harrisii
ENSPMGG00000010465	smg5	51	36.667	ENSSHAG00000000935	-	80	36.667	Sarcophilus_harrisii
ENSPMGG00000010465	smg5	72	36.409	ENSSHAG00000000561	-	86	36.409	Sarcophilus_harrisii
ENSPMGG00000010465	smg5	100	69.534	ENSSFOG00015024175	smg5	100	69.759	Scleropages_formosus
ENSPMGG00000010465	smg5	100	72.395	ENSSMAG00000013059	smg5	100	73.268	Scophthalmus_maximus
ENSPMGG00000010465	smg5	100	71.643	ENSSDUG00000007122	smg5	100	72.639	Seriola_dumerili
ENSPMGG00000010465	smg5	100	72.124	ENSSLDG00000011418	smg5	100	72.985	Seriola_lalandi_dorsalis
ENSPMGG00000010465	smg5	85	62.590	ENSSARG00000012484	SMG5	94	62.590	Sorex_araneus
ENSPMGG00000010465	smg5	94	59.544	ENSSPUG00000002260	SMG5	100	60.095	Sphenodon_punctatus
ENSPMGG00000010465	smg5	100	71.982	ENSSPAG00000014266	smg5	100	72.414	Stegastes_partitus
ENSPMGG00000010465	smg5	99	60.534	ENSSSCG00000006490	-	100	59.825	Sus_scrofa
ENSPMGG00000010465	smg5	99	47.059	ENSSSCG00000039308	-	99	47.712	Sus_scrofa
ENSPMGG00000010465	smg5	99	62.292	ENSTGUG00000003748	-	99	60.806	Taeniopygia_guttata
ENSPMGG00000010465	smg5	100	69.867	ENSTRUG00000012580	smg5	100	70.053	Takifugu_rubripes
ENSPMGG00000010465	smg5	100	70.147	ENSTNIG00000010303	smg5	100	70.249	Tetraodon_nigroviridis
ENSPMGG00000010465	smg5	53	80.296	ENSTBEG00000002777	SMG5	58	80.296	Tupaia_belangeri
ENSPMGG00000010465	smg5	99	56.578	ENSTTRG00000001401	SMG5	99	56.427	Tursiops_truncatus
ENSPMGG00000010465	smg5	99	59.649	ENSUAMG00000013721	SMG5	99	60.407	Ursus_americanus
ENSPMGG00000010465	smg5	98	56.367	ENSUMAG00000018041	SMG5	98	56.367	Ursus_maritimus
ENSPMGG00000010465	smg5	92	71.782	ENSVPAG00000009446	SMG5	99	53.471	Vicugna_pacos
ENSPMGG00000010465	smg5	99	59.686	ENSVVUG00000005887	SMG5	99	60.313	Vulpes_vulpes
ENSPMGG00000010465	smg5	78	51.054	ENSXETG00000033791	SMG5	100	51.047	Xenopus_tropicalis
ENSPMGG00000010465	smg5	81	83.516	ENSXCOG00000004379	smg5	99	83.516	Xiphophorus_couchianus
ENSPMGG00000010465	smg5	100	70.740	ENSXMAG00000013499	smg5	100	71.644	Xiphophorus_maculatus