EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000010792 (Gene tree)
Gene ID: -
Gene Symbol: rab5c
Alias: -
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 13893 bases
Position: chrKN460494.1:102809-116701
Accession: ZDB-GENE-031118-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000013869	MMR_HSR1	PF01926.23	0.00013	1	1
ENSPMGP00000013853	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000014787	-	663	-	ENSPMGP00000013853	220 (aa)	-	-
ENSPMGT00000014804	-	654	-	ENSPMGP00000013869	217 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000010792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000010792's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000010792	rab5c	97	89.573	ENSG00000108774	RAB5C	100	91.129	Homo_sapiens
ENSPMGG00000010792	rab5c	99	93.023	ENSAPOG00000016864	rab5c	100	91.364	Acanthochromis_polyacanthus
ENSPMGG00000010792	rab5c	97	89.573	ENSAMEG00000006003	RAB5C	99	86.111	Ailuropoda_melanoleuca
ENSPMGG00000010792	rab5c	99	93.953	ENSACIG00000010896	rab5c	99	93.897	Amphilophus_citrinellus
ENSPMGG00000010792	rab5c	99	93.023	ENSAOCG00000016614	rab5c	100	91.364	Amphiprion_ocellaris
ENSPMGG00000010792	rab5c	100	92.627	ENSAPEG00000017868	-	99	93.023	Amphiprion_percula
ENSPMGG00000010792	rab5c	98	94.811	ENSATEG00000001937	rab5c	99	93.088	Anabas_testudineus
ENSPMGG00000010792	rab5c	92	92.000	ENSANAG00000025390	RAB5C	100	87.805	Aotus_nancymaae
ENSPMGG00000010792	rab5c	99	93.023	ENSACLG00000002706	rab5c	100	91.364	Astatotilapia_calliptera
ENSPMGG00000010792	rab5c	98	89.151	ENSACLG00000008615	-	97	88.372	Astatotilapia_calliptera
ENSPMGG00000010792	rab5c	99	95.833	ENSAMXG00000043717	rab5c	100	94.118	Astyanax_mexicanus
ENSPMGG00000010792	rab5c	96	91.827	ENSAMXG00000037267	-	99	91.827	Astyanax_mexicanus
ENSPMGG00000010792	rab5c	97	89.573	ENSBTAG00000006982	RAB5C	99	85.648	Bos_taurus
ENSPMGG00000010792	rab5c	94	75.728	WBGene00004268	rab-5	96	75.728	Caenorhabditis_elegans
ENSPMGG00000010792	rab5c	97	89.573	ENSCAFG00000015629	RAB5C	99	86.111	Canis_familiaris
ENSPMGG00000010792	rab5c	97	89.573	ENSCAFG00020013537	RAB5C	99	86.111	Canis_lupus_dingo
ENSPMGG00000010792	rab5c	97	89.573	ENSCHIG00000012960	RAB5C	99	85.648	Capra_hircus
ENSPMGG00000010792	rab5c	97	90.047	ENSTSYG00000030531	RAB5C	99	86.111	Carlito_syrichta
ENSPMGG00000010792	rab5c	97	90.521	ENSCCAG00000025940	RAB5C	99	86.574	Cebus_capucinus
ENSPMGG00000010792	rab5c	97	89.573	ENSCATG00000040873	RAB5C	99	86.111	Cercocebus_atys
ENSPMGG00000010792	rab5c	97	90.047	ENSCLAG00000016650	RAB5C	99	86.111	Chinchilla_lanigera
ENSPMGG00000010792	rab5c	78	94.706	ENSCHOG00000009886	RAB5C	100	91.011	Choloepus_hoffmanni
ENSPMGG00000010792	rab5c	98	75.229	ENSCING00000003340	-	99	73.853	Ciona_intestinalis
ENSPMGG00000010792	rab5c	99	73.214	ENSCSAVG00000000613	-	99	81.481	Ciona_savignyi
ENSPMGG00000010792	rab5c	97	90.047	ENSCGRG00001014226	Rab5c	99	86.111	Cricetulus_griseus_chok1gshd
ENSPMGG00000010792	rab5c	97	90.047	ENSCGRG00000007534	Rab5c	99	86.111	Cricetulus_griseus_crigri
ENSPMGG00000010792	rab5c	99	92.093	ENSCSEG00000017024	rab5c	100	90.455	Cynoglossus_semilaevis
ENSPMGG00000010792	rab5c	99	93.953	ENSCVAG00000009550	rab5c	100	92.273	Cyprinodon_variegatus
ENSPMGG00000010792	rab5c	97	90.047	ENSDNOG00000038853	RAB5C	99	85.648	Dasypus_novemcinctus
ENSPMGG00000010792	rab5c	97	90.047	ENSDORG00000006819	Rab5c	99	86.111	Dipodomys_ordii
ENSPMGG00000010792	rab5c	88	76.963	FBgn0014010	Rab5	81	80.899	Drosophila_melanogaster
ENSPMGG00000010792	rab5c	85	86.559	ENSEBUG00000014794	rab5c	88	86.559	Eptatretus_burgeri
ENSPMGG00000010792	rab5c	97	89.573	ENSEASG00005009281	RAB5C	99	86.111	Equus_asinus_asinus
ENSPMGG00000010792	rab5c	97	90.047	ENSECAG00000025054	RAB5C	99	86.111	Equus_caballus
ENSPMGG00000010792	rab5c	97	89.573	ENSEEUG00000002790	RAB5C	99	85.648	Erinaceus_europaeus
ENSPMGG00000010792	rab5c	97	92.891	ENSELUG00000018516	rab5c	99	91.204	Esox_lucius
ENSPMGG00000010792	rab5c	99	88.837	ENSELUG00000010439	-	100	87.273	Esox_lucius
ENSPMGG00000010792	rab5c	97	89.573	ENSFCAG00000002148	RAB5C	99	85.648	Felis_catus
ENSPMGG00000010792	rab5c	97	89.100	ENSFDAG00000021541	RAB5C	99	85.648	Fukomys_damarensis
ENSPMGG00000010792	rab5c	98	91.549	ENSFHEG00000015268	-	97	91.549	Fundulus_heteroclitus
ENSPMGG00000010792	rab5c	99	94.419	ENSFHEG00000012117	rab5c	100	92.727	Fundulus_heteroclitus
ENSPMGG00000010792	rab5c	99	92.558	ENSGMOG00000015096	rab5c	100	90.909	Gadus_morhua
ENSPMGG00000010792	rab5c	75	89.506	ENSGMOG00000001876	-	94	89.506	Gadus_morhua
ENSPMGG00000010792	rab5c	94	91.133	ENSGAFG00000003642	-	97	88.889	Gambusia_affinis
ENSPMGG00000010792	rab5c	99	94.884	ENSGAFG00000000884	rab5c	100	93.182	Gambusia_affinis
ENSPMGG00000010792	rab5c	99	89.767	ENSGACG00000008659	rab5c	100	88.182	Gasterosteus_aculeatus
ENSPMGG00000010792	rab5c	97	89.573	ENSGGOG00000005472	RAB5C	99	86.111	Gorilla_gorilla
ENSPMGG00000010792	rab5c	99	93.023	ENSHBUG00000002014	rab5c	100	91.364	Haplochromis_burtoni
ENSPMGG00000010792	rab5c	98	89.151	ENSHBUG00000006823	-	97	88.372	Haplochromis_burtoni
ENSPMGG00000010792	rab5c	97	89.573	ENSHGLG00000012067	RAB5C	99	85.648	Heterocephalus_glaber_female
ENSPMGG00000010792	rab5c	96	82.381	ENSHCOG00000020238	-	97	80.543	Hippocampus_comes
ENSPMGG00000010792	rab5c	99	93.981	ENSHCOG00000004662	rab5c	98	93.151	Hippocampus_comes
ENSPMGG00000010792	rab5c	94	95.074	ENSIPUG00000020082	rab5c	100	91.441	Ictalurus_punctatus
ENSPMGG00000010792	rab5c	97	89.573	ENSSTOG00000006620	RAB5C	99	86.111	Ictidomys_tridecemlineatus
ENSPMGG00000010792	rab5c	97	90.047	ENSJJAG00000021181	Rab5c	99	85.648	Jaculus_jaculus
ENSPMGG00000010792	rab5c	99	94.419	ENSKMAG00000020038	rab5c	100	92.727	Kryptolebias_marmoratus
ENSPMGG00000010792	rab5c	98	91.080	ENSKMAG00000017417	-	97	91.080	Kryptolebias_marmoratus
ENSPMGG00000010792	rab5c	99	95.814	ENSLBEG00000004128	rab5c	100	94.091	Labrus_bergylta
ENSPMGG00000010792	rab5c	99	90.698	ENSLBEG00000010408	-	97	90.698	Labrus_bergylta
ENSPMGG00000010792	rab5c	97	90.521	ENSLOCG00000012566	rab5c	100	87.500	Lepisosteus_oculatus
ENSPMGG00000010792	rab5c	99	88.785	ENSMFAG00000039627	RAB5C	99	87.383	Macaca_fascicularis
ENSPMGG00000010792	rab5c	97	89.573	ENSMNEG00000000355	RAB5C	99	86.111	Macaca_nemestrina
ENSPMGG00000010792	rab5c	99	95.794	ENSMAMG00000022322	rab5c	100	94.091	Mastacembelus_armatus
ENSPMGG00000010792	rab5c	98	90.610	ENSMAMG00000016207	-	97	90.610	Mastacembelus_armatus
ENSPMGG00000010792	rab5c	98	89.151	ENSMZEG00005021090	-	97	88.372	Maylandia_zebra
ENSPMGG00000010792	rab5c	99	93.023	ENSMZEG00005022735	rab5c	100	91.364	Maylandia_zebra
ENSPMGG00000010792	rab5c	97	90.521	ENSMAUG00000015005	Rab5c	99	86.574	Mesocricetus_auratus
ENSPMGG00000010792	rab5c	97	90.047	ENSMICG00000041608	RAB5C	99	86.111	Microcebus_murinus
ENSPMGG00000010792	rab5c	97	90.521	ENSMOCG00000018531	-	99	86.111	Microtus_ochrogaster
ENSPMGG00000010792	rab5c	99	93.023	ENSMMOG00000020621	rab5c	100	91.364	Mola_mola
ENSPMGG00000010792	rab5c	100	87.097	ENSMALG00000006052	rab5c	99	86.818	Monopterus_albus
ENSPMGG00000010792	rab5c	98	89.671	ENSMALG00000022348	-	97	89.671	Monopterus_albus
ENSPMGG00000010792	rab5c	97	90.521	MGP_CAROLIEiJ_G0017184	Rab5c	99	86.574	Mus_caroli
ENSPMGG00000010792	rab5c	97	90.521	ENSMUSG00000019173	Rab5c	99	86.574	Mus_musculus
ENSPMGG00000010792	rab5c	97	90.521	MGP_PahariEiJ_G0018314	Rab5c	99	86.574	Mus_pahari
ENSPMGG00000010792	rab5c	97	90.521	MGP_SPRETEiJ_G0018027	Rab5c	99	86.574	Mus_spretus
ENSPMGG00000010792	rab5c	97	89.573	ENSMPUG00000010554	RAB5C	99	86.111	Mustela_putorius_furo
ENSPMGG00000010792	rab5c	97	90.047	ENSNGAG00000010286	Rab5c	99	86.111	Nannospalax_galili
ENSPMGG00000010792	rab5c	98	89.151	ENSNBRG00000016922	-	97	88.372	Neolamprologus_brichardi
ENSPMGG00000010792	rab5c	99	93.953	ENSNBRG00000018165	rab5c	100	92.273	Neolamprologus_brichardi
ENSPMGG00000010792	rab5c	80	86.705	ENSOPRG00000008255	RAB5C	100	84.831	Ochotona_princeps
ENSPMGG00000010792	rab5c	97	90.047	ENSODEG00000017920	RAB5C	99	86.111	Octodon_degus
ENSPMGG00000010792	rab5c	99	93.953	ENSONIG00000001113	rab5c	100	92.273	Oreochromis_niloticus
ENSPMGG00000010792	rab5c	98	94.340	ENSORLG00000003882	rab5c	99	92.627	Oryzias_latipes
ENSPMGG00000010792	rab5c	98	93.868	ENSORLG00020008388	rab5c	99	92.166	Oryzias_latipes_hni
ENSPMGG00000010792	rab5c	98	94.340	ENSORLG00015021900	rab5c	99	92.627	Oryzias_latipes_hsok
ENSPMGG00000010792	rab5c	98	94.340	ENSOMEG00000023078	rab5c	99	92.627	Oryzias_melastigma
ENSPMGG00000010792	rab5c	97	90.047	ENSOGAG00000009456	RAB5C	99	86.111	Otolemur_garnettii
ENSPMGG00000010792	rab5c	97	89.573	ENSOARG00000018768	RAB5C	99	85.648	Ovis_aries
ENSPMGG00000010792	rab5c	97	89.573	ENSPPAG00000037206	RAB5C	99	86.111	Pan_paniscus
ENSPMGG00000010792	rab5c	97	89.573	ENSPPRG00000005745	RAB5C	99	85.648	Panthera_pardus
ENSPMGG00000010792	rab5c	97	89.573	ENSPTIG00000008177	RAB5C	99	85.648	Panthera_tigris_altaica
ENSPMGG00000010792	rab5c	99	88.785	ENSPTRG00000009194	RAB5C	99	87.383	Pan_troglodytes
ENSPMGG00000010792	rab5c	97	88.152	ENSPKIG00000001237	-	99	84.722	Paramormyrops_kingsleyae
ENSPMGG00000010792	rab5c	97	86.256	ENSPKIG00000020112	-	99	85.185	Paramormyrops_kingsleyae
ENSPMGG00000010792	rab5c	97	90.521	ENSPEMG00000017971	Rab5c	99	86.111	Peromyscus_maniculatus_bairdii
ENSPMGG00000010792	rab5c	87	81.579	ENSPMAG00000007867	rab5c	89	81.915	Petromyzon_marinus
ENSPMGG00000010792	rab5c	98	77.523	ENSPMAG00000000008	rab5c	86	85.185	Petromyzon_marinus
ENSPMGG00000010792	rab5c	97	76.190	ENSPMAG00000001399	rab5c	100	75.115	Petromyzon_marinus
ENSPMGG00000010792	rab5c	96	90.865	ENSPCIG00000020225	-	95	88.942	Phascolarctos_cinereus
ENSPMGG00000010792	rab5c	99	94.884	ENSPLAG00000004790	rab5c	100	93.182	Poecilia_latipinna
ENSPMGG00000010792	rab5c	98	89.671	ENSPLAG00000016333	-	97	89.671	Poecilia_latipinna
ENSPMGG00000010792	rab5c	95	90.821	ENSPMEG00000012614	-	97	89.401	Poecilia_mexicana
ENSPMGG00000010792	rab5c	99	94.884	ENSPMEG00000011336	rab5c	100	93.182	Poecilia_mexicana
ENSPMGG00000010792	rab5c	99	94.884	ENSPREG00000010146	rab5c	100	93.182	Poecilia_reticulata
ENSPMGG00000010792	rab5c	84	91.257	ENSPREG00000022167	-	86	94.643	Poecilia_reticulata
ENSPMGG00000010792	rab5c	97	89.573	ENSPPYG00000008398	RAB5C	99	86.111	Pongo_abelii
ENSPMGG00000010792	rab5c	97	89.100	ENSPCAG00000016412	RAB5C	99	85.185	Procavia_capensis
ENSPMGG00000010792	rab5c	97	89.573	ENSPCOG00000026327	RAB5C	99	86.111	Propithecus_coquereli
ENSPMGG00000010792	rab5c	97	90.047	ENSPVAG00000003867	RAB5C	99	86.111	Pteropus_vampyrus
ENSPMGG00000010792	rab5c	98	89.151	ENSPNYG00000015851	-	97	88.372	Pundamilia_nyererei
ENSPMGG00000010792	rab5c	99	93.023	ENSPNYG00000010615	rab5c	100	91.364	Pundamilia_nyererei
ENSPMGG00000010792	rab5c	99	95.370	ENSPNAG00000028138	rab5c	100	93.665	Pygocentrus_nattereri
ENSPMGG00000010792	rab5c	96	90.431	ENSPNAG00000002218	-	98	90.431	Pygocentrus_nattereri
ENSPMGG00000010792	rab5c	97	90.521	ENSRNOG00000018568	Rab5c	99	86.574	Rattus_norvegicus
ENSPMGG00000010792	rab5c	97	89.573	ENSRBIG00000031376	RAB5C	99	86.111	Rhinopithecus_bieti
ENSPMGG00000010792	rab5c	97	89.573	ENSRROG00000032895	RAB5C	99	86.111	Rhinopithecus_roxellana
ENSPMGG00000010792	rab5c	97	90.521	ENSSBOG00000032552	-	99	86.574	Saimiri_boliviensis_boliviensis
ENSPMGG00000010792	rab5c	97	90.047	ENSSHAG00000005267	-	99	86.574	Sarcophilus_harrisii
ENSPMGG00000010792	rab5c	99	86.512	ENSSFOG00015009988	-	100	85.000	Scleropages_formosus
ENSPMGG00000010792	rab5c	94	94.118	ENSSMAG00000007323	rab5c	100	92.273	Scophthalmus_maximus
ENSPMGG00000010792	rab5c	99	94.419	ENSSDUG00000023008	rab5c	100	92.727	Seriola_dumerili
ENSPMGG00000010792	rab5c	99	93.488	ENSSLDG00000017771	rab5c	100	91.818	Seriola_lalandi_dorsalis
ENSPMGG00000010792	rab5c	97	89.573	ENSSPUG00000012950	-	99	86.111	Sphenodon_punctatus
ENSPMGG00000010792	rab5c	99	95.349	ENSSPAG00000006436	rab5c	100	93.636	Stegastes_partitus
ENSPMGG00000010792	rab5c	97	89.573	ENSSSCG00000032467	RAB5C	99	85.648	Sus_scrofa
ENSPMGG00000010792	rab5c	99	93.953	ENSTRUG00000015590	rab5c	100	92.273	Takifugu_rubripes
ENSPMGG00000010792	rab5c	97	94.762	ENSTNIG00000011711	rab5c	95	94.762	Tetraodon_nigroviridis
ENSPMGG00000010792	rab5c	97	89.573	ENSTBEG00000007092	RAB5C	99	86.111	Tupaia_belangeri
ENSPMGG00000010792	rab5c	97	89.100	ENSTTRG00000006673	RAB5C	99	85.185	Tursiops_truncatus
ENSPMGG00000010792	rab5c	97	89.573	ENSUAMG00000024343	RAB5C	99	86.111	Ursus_americanus
ENSPMGG00000010792	rab5c	97	89.573	ENSUMAG00000023270	RAB5C	99	86.111	Ursus_maritimus
ENSPMGG00000010792	rab5c	94	91.133	ENSXCOG00000006300	-	97	88.889	Xiphophorus_couchianus
ENSPMGG00000010792	rab5c	100	94.931	ENSXCOG00000016788	rab5c	99	95.283	Xiphophorus_couchianus
ENSPMGG00000010792	rab5c	98	89.202	ENSXMAG00000022179	-	97	89.202	Xiphophorus_maculatus
ENSPMGG00000010792	rab5c	99	94.884	ENSXMAG00000003266	rab5c	100	93.182	Xiphophorus_maculatus