EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000011059 (Gene tree)
Gene ID: -
Gene Symbol: hfm1
Alias: -
Full Name: HFM1%2C ATP-dependent DNA helicase homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 16261 bases
Position: chrKN464758.1:109510-125770
Accession: ZDB-GENE-061207-43
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000013457	ResIII	PF04851.15	2.5e-12	1	1
ENSPMGP00000013456	ResIII	PF04851.15	3.7e-10	1	1
ENSPMGP00000013457	DEAD	PF00270.29	7e-27	1	1
ENSPMGP00000013456	DEAD	PF00270.29	1.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000014356	-	987	-	ENSPMGP00000013457	328 (aa)	-	-
ENSPMGT00000014355	-	2379	-	ENSPMGP00000013456	793 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000011059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000011059's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000011059	hfm1	100	66.264	ENSG00000162669	HFM1	58	66.264	Homo_sapiens
ENSPMGG00000011059	hfm1	99	81.281	ENSAPOG00000005304	hfm1	93	81.281	Acanthochromis_polyacanthus
ENSPMGG00000011059	hfm1	99	65.697	ENSAMEG00000000432	HFM1	57	65.697	Ailuropoda_melanoleuca
ENSPMGG00000011059	hfm1	98	78.668	ENSACIG00000021553	hfm1	75	78.668	Amphilophus_citrinellus
ENSPMGG00000011059	hfm1	99	82.058	ENSAOCG00000022839	hfm1	96	79.193	Amphiprion_ocellaris
ENSPMGG00000011059	hfm1	99	82.116	ENSAPEG00000014316	hfm1	96	79.140	Amphiprion_percula
ENSPMGG00000011059	hfm1	100	79.419	ENSATEG00000019181	hfm1	68	78.913	Anabas_testudineus
ENSPMGG00000011059	hfm1	100	64.656	ENSAPLG00000013639	HFM1	58	64.656	Anas_platyrhynchos
ENSPMGG00000011059	hfm1	100	65.097	ENSANAG00000029513	HFM1	59	65.097	Aotus_nancymaae
ENSPMGG00000011059	hfm1	99	80.051	ENSACLG00000009033	hfm1	95	80.051	Astatotilapia_calliptera
ENSPMGG00000011059	hfm1	100	72.276	ENSAMXG00000006108	hfm1	57	72.276	Astyanax_mexicanus
ENSPMGG00000011059	hfm1	100	66.385	ENSBTAG00000020856	HFM1	57	66.385	Bos_taurus
ENSPMGG00000011059	hfm1	100	65.659	ENSCJAG00000001843	HFM1	58	65.659	Callithrix_jacchus
ENSPMGG00000011059	hfm1	100	65.012	ENSCAFG00000020187	HFM1	57	65.012	Canis_familiaris
ENSPMGG00000011059	hfm1	100	65.942	ENSTSYG00000014250	HFM1	58	65.942	Carlito_syrichta
ENSPMGG00000011059	hfm1	99	65.375	ENSCPOG00000007421	HFM1	59	65.375	Cavia_porcellus
ENSPMGG00000011059	hfm1	100	65.296	ENSCCAG00000033206	HFM1	58	65.296	Cebus_capucinus
ENSPMGG00000011059	hfm1	100	65.901	ENSCATG00000030987	HFM1	58	65.901	Cercocebus_atys
ENSPMGG00000011059	hfm1	99	66.049	ENSCLAG00000005173	HFM1	55	66.049	Chinchilla_lanigera
ENSPMGG00000011059	hfm1	84	49.720	ENSCSAVG00000005094	-	100	49.720	Ciona_savignyi
ENSPMGG00000011059	hfm1	97	61.757	ENSCGRG00001016995	Hfm1	57	61.757	Cricetulus_griseus_chok1gshd
ENSPMGG00000011059	hfm1	100	64.087	ENSCGRG00000017181	Hfm1	58	64.087	Cricetulus_griseus_crigri
ENSPMGG00000011059	hfm1	100	75.971	ENSCSEG00000017659	hfm1	76	75.971	Cynoglossus_semilaevis
ENSPMGG00000011059	hfm1	87	76.224	ENSCVAG00000005075	hfm1	86	76.224	Cyprinodon_variegatus
ENSPMGG00000011059	hfm1	100	72.963	ENSDARG00000104288	hfm1	75	72.963	Danio_rerio
ENSPMGG00000011059	hfm1	99	65.249	ENSDNOG00000004776	HFM1	55	65.249	Dasypus_novemcinctus
ENSPMGG00000011059	hfm1	100	63.863	ENSDORG00000014661	Hfm1	58	63.863	Dipodomys_ordii
ENSPMGG00000011059	hfm1	53	61.453	ENSEBUG00000006133	-	89	61.085	Eptatretus_burgeri
ENSPMGG00000011059	hfm1	97	65.793	ENSEASG00005015424	HFM1	80	65.793	Equus_asinus_asinus
ENSPMGG00000011059	hfm1	100	65.901	ENSECAG00000024039	HFM1	56	65.901	Equus_caballus
ENSPMGG00000011059	hfm1	100	76.345	ENSELUG00000018944	hfm1	91	76.345	Esox_lucius
ENSPMGG00000011059	hfm1	100	65.417	ENSFCAG00000029116	HFM1	57	65.417	Felis_catus
ENSPMGG00000011059	hfm1	100	65.097	ENSFALG00000001781	HFM1	58	65.097	Ficedula_albicollis
ENSPMGG00000011059	hfm1	100	65.538	ENSFDAG00000020816	HFM1	56	65.538	Fukomys_damarensis
ENSPMGG00000011059	hfm1	100	70.646	ENSGMOG00000017436	hfm1	86	70.646	Gadus_morhua
ENSPMGG00000011059	hfm1	98	78.145	ENSGAFG00000018093	hfm1	91	78.145	Gambusia_affinis
ENSPMGG00000011059	hfm1	100	75.976	ENSGACG00000015686	hfm1	85	75.976	Gasterosteus_aculeatus
ENSPMGG00000011059	hfm1	53	71.591	ENSGAGG00000025197	-	60	70.707	Gopherus_agassizii
ENSPMGG00000011059	hfm1	100	66.264	ENSGGOG00000038524	HFM1	58	66.264	Gorilla_gorilla
ENSPMGG00000011059	hfm1	99	77.091	ENSHBUG00000007309	hfm1	79	77.091	Haplochromis_burtoni
ENSPMGG00000011059	hfm1	98	79.337	ENSHCOG00000019632	hfm1	97	79.337	Hippocampus_comes
ENSPMGG00000011059	hfm1	99	75.282	ENSIPUG00000017020	hfm1	90	75.282	Ictalurus_punctatus
ENSPMGG00000011059	hfm1	100	64.329	ENSJJAG00000017198	Hfm1	59	64.329	Jaculus_jaculus
ENSPMGG00000011059	hfm1	98	76.838	ENSKMAG00000002282	hfm1	84	76.838	Kryptolebias_marmoratus
ENSPMGG00000011059	hfm1	100	81.234	ENSLBEG00000006759	hfm1	95	81.234	Labrus_bergylta
ENSPMGG00000011059	hfm1	99	67.188	ENSLACG00000010698	HFM1	79	67.308	Latimeria_chalumnae
ENSPMGG00000011059	hfm1	100	69.928	ENSLOCG00000004931	hfm1	76	69.928	Lepisosteus_oculatus
ENSPMGG00000011059	hfm1	81	67.015	ENSLAFG00000015903	-	90	67.015	Loxodonta_africana
ENSPMGG00000011059	hfm1	100	63.228	ENSMFAG00000003649	HFM1	57	63.228	Macaca_fascicularis
ENSPMGG00000011059	hfm1	100	65.901	ENSMMUG00000006819	HFM1	58	65.901	Macaca_mulatta
ENSPMGG00000011059	hfm1	99	82.264	ENSMAMG00000004623	hfm1	97	82.264	Mastacembelus_armatus
ENSPMGG00000011059	hfm1	99	80.051	ENSMZEG00005004679	hfm1	95	80.051	Maylandia_zebra
ENSPMGG00000011059	hfm1	92	64.389	ENSMGAG00000008437	HFM1	94	64.389	Meleagris_gallopavo
ENSPMGG00000011059	hfm1	100	64.649	ENSMAUG00000018858	Hfm1	57	64.649	Mesocricetus_auratus
ENSPMGG00000011059	hfm1	100	65.217	ENSMICG00000037935	HFM1	58	65.217	Microcebus_murinus
ENSPMGG00000011059	hfm1	100	64.891	ENSMOCG00000014812	Hfm1	58	64.891	Microtus_ochrogaster
ENSPMGG00000011059	hfm1	99	80.958	ENSMMOG00000006148	hfm1	92	80.958	Mola_mola
ENSPMGG00000011059	hfm1	100	82.286	ENSMALG00000002401	hfm1	94	82.286	Monopterus_albus
ENSPMGG00000011059	hfm1	91	68.644	MGP_CAROLIEiJ_G0027496	Hfm1	53	68.644	Mus_caroli
ENSPMGG00000011059	hfm1	100	64.407	ENSMUSG00000043410	Hfm1	58	64.407	Mus_musculus
ENSPMGG00000011059	hfm1	100	64.891	MGP_PahariEiJ_G0017268	Hfm1	58	64.891	Mus_pahari
ENSPMGG00000011059	hfm1	100	64.770	MGP_SPRETEiJ_G0028495	Hfm1	58	64.770	Mus_spretus
ENSPMGG00000011059	hfm1	100	65.659	ENSMPUG00000004594	HFM1	56	65.659	Mustela_putorius_furo
ENSPMGG00000011059	hfm1	100	65.296	ENSMLUG00000010200	HFM1	57	65.296	Myotis_lucifugus
ENSPMGG00000011059	hfm1	99	78.894	ENSNBRG00000002910	hfm1	97	78.894	Neolamprologus_brichardi
ENSPMGG00000011059	hfm1	100	64.286	ENSNLEG00000010285	HFM1	57	64.286	Nomascus_leucogenys
ENSPMGG00000011059	hfm1	100	59.976	ENSOPRG00000013916	HFM1	58	59.976	Ochotona_princeps
ENSPMGG00000011059	hfm1	99	77.818	ENSONIG00000010590	hfm1	79	77.818	Oreochromis_niloticus
ENSPMGG00000011059	hfm1	98	77.834	ENSORLG00000026844	hfm1	99	77.834	Oryzias_latipes
ENSPMGG00000011059	hfm1	99	65.614	ENSORLG00020002951	hfm1	65	65.614	Oryzias_latipes_hni
ENSPMGG00000011059	hfm1	99	74.909	ENSOMEG00000016474	hfm1	57	74.909	Oryzias_melastigma
ENSPMGG00000011059	hfm1	100	65.459	ENSOGAG00000032369	HFM1	67	65.459	Otolemur_garnettii
ENSPMGG00000011059	hfm1	100	66.022	ENSOARG00000015812	HFM1	58	66.022	Ovis_aries
ENSPMGG00000011059	hfm1	100	66.505	ENSPPAG00000024582	HFM1	62	66.505	Pan_paniscus
ENSPMGG00000011059	hfm1	100	65.417	ENSPPRG00000003270	HFM1	57	65.417	Panthera_pardus
ENSPMGG00000011059	hfm1	100	65.417	ENSPTIG00000018881	HFM1	57	65.417	Panthera_tigris_altaica
ENSPMGG00000011059	hfm1	100	66.385	ENSPTRG00000000948	HFM1	58	66.385	Pan_troglodytes
ENSPMGG00000011059	hfm1	100	65.780	ENSPANG00000009838	HFM1	58	65.780	Papio_anubis
ENSPMGG00000011059	hfm1	98	72.265	ENSPKIG00000003810	hfm1	94	72.265	Paramormyrops_kingsleyae
ENSPMGG00000011059	hfm1	100	64.770	ENSPEMG00000022852	Hfm1	57	64.770	Peromyscus_maniculatus_bairdii
ENSPMGG00000011059	hfm1	100	64.536	ENSPCIG00000014233	HFM1	56	64.536	Phascolarctos_cinereus
ENSPMGG00000011059	hfm1	99	76.242	ENSPFOG00000017194	hfm1	79	76.242	Poecilia_formosa
ENSPMGG00000011059	hfm1	99	76.364	ENSPLAG00000000571	hfm1	75	76.364	Poecilia_latipinna
ENSPMGG00000011059	hfm1	99	76.000	ENSPMEG00000019475	hfm1	76	76.000	Poecilia_mexicana
ENSPMGG00000011059	hfm1	98	77.707	ENSPREG00000007803	hfm1	91	77.707	Poecilia_reticulata
ENSPMGG00000011059	hfm1	100	66.264	ENSPPYG00000001163	HFM1	58	66.264	Pongo_abelii
ENSPMGG00000011059	hfm1	100	60.701	ENSPVAG00000009713	HFM1	59	60.701	Pteropus_vampyrus
ENSPMGG00000011059	hfm1	99	79.697	ENSPNYG00000001795	hfm1	95	79.697	Pundamilia_nyererei
ENSPMGG00000011059	hfm1	100	74.688	ENSPNAG00000010865	hfm1	82	74.688	Pygocentrus_nattereri
ENSPMGG00000011059	hfm1	100	64.407	ENSRNOG00000023299	Hfm1	58	64.407	Rattus_norvegicus
ENSPMGG00000011059	hfm1	100	66.022	ENSRROG00000045569	HFM1	58	66.022	Rhinopithecus_roxellana
ENSPMGG00000011059	hfm1	100	65.659	ENSSBOG00000027456	HFM1	59	65.659	Saimiri_boliviensis_boliviensis
ENSPMGG00000011059	hfm1	71	66.440	ENSSHAG00000014616	-	67	66.440	Sarcophilus_harrisii
ENSPMGG00000011059	hfm1	100	72.397	ENSSFOG00015020129	hfm1	55	72.397	Scleropages_formosus
ENSPMGG00000011059	hfm1	100	77.711	ENSSMAG00000006907	hfm1	81	77.711	Scophthalmus_maximus
ENSPMGG00000011059	hfm1	100	81.727	ENSSDUG00000011424	hfm1	93	81.727	Seriola_dumerili
ENSPMGG00000011059	hfm1	100	81.875	ENSSLDG00000016386	hfm1	92	81.875	Seriola_lalandi_dorsalis
ENSPMGG00000011059	hfm1	54	70.787	ENSSPUG00000003380	-	52	70.558	Sphenodon_punctatus
ENSPMGG00000011059	hfm1	99	81.328	ENSSPAG00000001023	hfm1	93	81.328	Stegastes_partitus
ENSPMGG00000011059	hfm1	100	66.264	ENSSSCG00000006912	HFM1	60	66.264	Sus_scrofa
ENSPMGG00000011059	hfm1	99	64.933	ENSTGUG00000006172	HFM1	86	64.933	Taeniopygia_guttata
ENSPMGG00000011059	hfm1	58	79.266	ENSTNIG00000006962	hfm1	95	79.266	Tetraodon_nigroviridis
ENSPMGG00000011059	hfm1	100	65.780	ENSTTRG00000013933	HFM1	58	65.780	Tursiops_truncatus
ENSPMGG00000011059	hfm1	100	62.999	ENSVPAG00000011331	HFM1	57	62.999	Vicugna_pacos
ENSPMGG00000011059	hfm1	98	64.808	ENSVVUG00000020760	HFM1	81	64.808	Vulpes_vulpes
ENSPMGG00000011059	hfm1	98	78.599	ENSXMAG00000004178	hfm1	90	78.599	Xiphophorus_maculatus