EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000011336 (Gene tree)
Gene ID: -
Gene Symbol: khdrbs1a
Alias: -
Full Name: KH domain containing%2C RNA binding%2C signal transduction associated 1a
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 4067 bases
Position: chrKN465386.1:1620161-1624227
Accession: ZDB-GENE-000210-25
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000013790	KH_1	PF00013.29	6.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000014719	-	1026	-	ENSPMGP00000013790	341 (aa)	-	-
ENSPMGT00000014718	-	489	-	ENSPMGP00000013789	162 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000011336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000011336's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000011336	khdrbs1a	100	67.526	ENSAPOG00000011054	khdrbs1a	73	86.628	Acanthochromis_polyacanthus
ENSPMGG00000011336	khdrbs1a	100	68.041	ENSAPEG00000021382	khdrbs1a	73	87.209	Amphiprion_percula
ENSPMGG00000011336	khdrbs1a	97	59.003	ENSAMXG00000011853	khdrbs1b	76	79.375	Astyanax_mexicanus
ENSPMGG00000011336	khdrbs1a	98	60.294	ENSCCAG00000034524	KHDRBS1	77	47.671	Cebus_capucinus
ENSPMGG00000011336	khdrbs1a	71	74.847	ENSCHOG00000006973	KHDRBS1	53	74.847	Choloepus_hoffmanni
ENSPMGG00000011336	khdrbs1a	79	88.623	ENSGMOG00000011695	khdrbs1a	75	88.623	Gadus_morhua
ENSPMGG00000011336	khdrbs1a	100	63.452	ENSLBEG00000025137	khdrbs1a	96	66.017	Labrus_bergylta
ENSPMGG00000011336	khdrbs1a	97	73.011	ENSMMOG00000002147	khdrbs1a	99	66.477	Mola_mola
ENSPMGG00000011336	khdrbs1a	63	79.012	ENSMEUG00000015720	-	54	79.012	Notamacropus_eugenii
ENSPMGG00000011336	khdrbs1a	100	68.974	ENSONIG00000012217	khdrbs1a	97	64.615	Oreochromis_niloticus
ENSPMGG00000011336	khdrbs1a	98	56.354	ENSSPUG00000017881	KHDRBS1	61	69.061	Sphenodon_punctatus
ENSPMGG00000011336	khdrbs1a	97	72.521	ENSSPAG00000020848	khdrbs1a	100	69.688	Stegastes_partitus
ENSPMGG00000011336	khdrbs1a	97	67.908	ENSXCOG00000011027	khdrbs1a	99	67.335	Xiphophorus_couchianus