EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000011577 (Gene tree)
Gene ID: -
Gene Symbol: tsr1
Alias: -
Full Name: TSR1%2C 20S rRNA accumulation%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 4938 bases
Position: chrKN468313.1:825683-830620
Accession: ZDB-GENE-030131-3762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000014101	AARP2CN	PF08142.12	8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000015044	-	2439	-	ENSPMGP00000014101	812 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000011577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000011577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000011577	tsr1	98	57.338	ENSG00000167721	TSR1	99	57.463	Homo_sapiens
ENSPMGG00000011577	tsr1	100	81.459	ENSAPOG00000020891	tsr1	99	82.593	Acanthochromis_polyacanthus
ENSPMGG00000011577	tsr1	99	55.556	ENSAMEG00000007599	TSR1	99	54.227	Ailuropoda_melanoleuca
ENSPMGG00000011577	tsr1	99	82.331	ENSACIG00000007090	tsr1	99	81.518	Amphilophus_citrinellus
ENSPMGG00000011577	tsr1	99	81.741	ENSAOCG00000023284	tsr1	99	82.750	Amphiprion_ocellaris
ENSPMGG00000011577	tsr1	93	81.032	ENSAPEG00000008452	tsr1	99	82.124	Amphiprion_percula
ENSPMGG00000011577	tsr1	99	81.796	ENSATEG00000021961	tsr1	99	82.635	Anabas_testudineus
ENSPMGG00000011577	tsr1	89	61.194	ENSAPLG00000013422	TSR1	98	61.164	Anas_platyrhynchos
ENSPMGG00000011577	tsr1	70	51.877	ENSACAG00000000859	TSR1	92	50.937	Anolis_carolinensis
ENSPMGG00000011577	tsr1	98	57.534	ENSANAG00000031071	TSR1	99	57.783	Aotus_nancymaae
ENSPMGG00000011577	tsr1	99	81.939	ENSACLG00000007595	tsr1	99	82.061	Astatotilapia_calliptera
ENSPMGG00000011577	tsr1	51	74.224	ENSAMXG00000008470	tsr1	90	73.995	Astyanax_mexicanus
ENSPMGG00000011577	tsr1	98	56.810	ENSBTAG00000004225	TSR1	99	57.055	Bos_taurus
ENSPMGG00000011577	tsr1	96	39.421	WBGene00006497	tag-151	96	39.649	Caenorhabditis_elegans
ENSPMGG00000011577	tsr1	98	56.468	ENSCJAG00000012456	TSR1	99	56.716	Callithrix_jacchus
ENSPMGG00000011577	tsr1	89	54.645	ENSCAFG00000019273	-	99	58.118	Canis_familiaris
ENSPMGG00000011577	tsr1	99	56.436	ENSCAFG00000002106	-	99	56.436	Canis_familiaris
ENSPMGG00000011577	tsr1	99	56.064	ENSCAFG00020009728	TSR1	99	56.064	Canis_lupus_dingo
ENSPMGG00000011577	tsr1	99	57.037	ENSCHIG00000023935	TSR1	99	57.284	Capra_hircus
ENSPMGG00000011577	tsr1	98	57.888	ENSTSYG00000005468	TSR1	99	58.085	Carlito_syrichta
ENSPMGG00000011577	tsr1	92	56.972	ENSCPOG00000014833	TSR1	99	58.201	Cavia_porcellus
ENSPMGG00000011577	tsr1	92	56.159	ENSCCAG00000028962	TSR1	98	56.424	Cebus_capucinus
ENSPMGG00000011577	tsr1	97	57.410	ENSCATG00000044262	TSR1	98	57.783	Cercocebus_atys
ENSPMGG00000011577	tsr1	99	57.407	ENSCLAG00000005567	TSR1	99	57.125	Chinchilla_lanigera
ENSPMGG00000011577	tsr1	97	57.534	ENSCSAG00000013788	TSR1	98	57.908	Chlorocebus_sabaeus
ENSPMGG00000011577	tsr1	98	58.758	ENSCPBG00000020363	TSR1	96	58.037	Chrysemys_picta_bellii
ENSPMGG00000011577	tsr1	96	46.348	ENSCING00000020658	-	99	46.532	Ciona_intestinalis
ENSPMGG00000011577	tsr1	96	45.074	ENSCSAVG00000001875	-	100	45.328	Ciona_savignyi
ENSPMGG00000011577	tsr1	97	54.489	ENSCANG00000033056	TSR1	98	54.239	Colobus_angolensis_palliatus
ENSPMGG00000011577	tsr1	99	55.926	ENSCGRG00001023942	Tsr1	99	56.049	Cricetulus_griseus_chok1gshd
ENSPMGG00000011577	tsr1	100	77.349	ENSCSEG00000013009	tsr1	99	77.872	Cynoglossus_semilaevis
ENSPMGG00000011577	tsr1	99	78.909	ENSCVAG00000000506	tsr1	99	79.515	Cyprinodon_variegatus
ENSPMGG00000011577	tsr1	99	73.812	ENSDARG00000007744	tsr1	99	74.056	Danio_rerio
ENSPMGG00000011577	tsr1	99	58.303	ENSDNOG00000004715	TSR1	99	58.551	Dasypus_novemcinctus
ENSPMGG00000011577	tsr1	96	50.953	ENSDORG00000023234	-	99	49.617	Dipodomys_ordii
ENSPMGG00000011577	tsr1	99	56.950	ENSDORG00000016371	-	99	55.966	Dipodomys_ordii
ENSPMGG00000011577	tsr1	96	45.398	FBgn0037073	Tsr1	96	44.581	Drosophila_melanogaster
ENSPMGG00000011577	tsr1	90	67.657	ENSETEG00000017534	TSR1	89	67.327	Echinops_telfairi
ENSPMGG00000011577	tsr1	95	51.523	ENSEBUG00000013731	TSR1	99	51.523	Eptatretus_burgeri
ENSPMGG00000011577	tsr1	99	56.671	ENSEASG00005009302	TSR1	98	57.038	Equus_asinus_asinus
ENSPMGG00000011577	tsr1	99	56.807	ENSECAG00000009114	TSR1	99	56.807	Equus_caballus
ENSPMGG00000011577	tsr1	99	73.887	ENSELUG00000020984	tsr1	96	73.735	Esox_lucius
ENSPMGG00000011577	tsr1	99	56.613	ENSFCAG00000006313	TSR1	99	56.897	Felis_catus
ENSPMGG00000011577	tsr1	99	59.902	ENSFALG00000006532	TSR1	98	59.951	Ficedula_albicollis
ENSPMGG00000011577	tsr1	99	57.407	ENSFDAG00000006038	TSR1	99	56.984	Fukomys_damarensis
ENSPMGG00000011577	tsr1	99	79.112	ENSFHEG00000003626	tsr1	99	79.281	Fundulus_heteroclitus
ENSPMGG00000011577	tsr1	99	72.683	ENSGMOG00000010336	tsr1	99	73.082	Gadus_morhua
ENSPMGG00000011577	tsr1	99	78.313	ENSGAFG00000012993	tsr1	99	78.434	Gambusia_affinis
ENSPMGG00000011577	tsr1	99	80.508	ENSGACG00000010843	tsr1	99	80.508	Gasterosteus_aculeatus
ENSPMGG00000011577	tsr1	98	58.458	ENSGAGG00000025619	-	99	58.446	Gopherus_agassizii
ENSPMGG00000011577	tsr1	98	57.908	ENSGGOG00000001704	TSR1	99	57.587	Gorilla_gorilla
ENSPMGG00000011577	tsr1	99	81.763	ENSHBUG00000017904	tsr1	99	81.884	Haplochromis_burtoni
ENSPMGG00000011577	tsr1	95	49.616	ENSHGLG00000015688	-	98	49.425	Heterocephalus_glaber_female
ENSPMGG00000011577	tsr1	99	57.934	ENSHGLG00000012806	-	99	57.442	Heterocephalus_glaber_female
ENSPMGG00000011577	tsr1	99	57.934	ENSHGLG00100015392	TSR1	99	57.442	Heterocephalus_glaber_male
ENSPMGG00000011577	tsr1	99	78.844	ENSHCOG00000001432	tsr1	99	78.967	Hippocampus_comes
ENSPMGG00000011577	tsr1	99	71.103	ENSIPUG00000004618	tsr1	99	71.310	Ictalurus_punctatus
ENSPMGG00000011577	tsr1	99	57.337	ENSSTOG00000011819	TSR1	99	57.862	Ictidomys_tridecemlineatus
ENSPMGG00000011577	tsr1	90	55.163	ENSJJAG00000019505	Tsr1	95	54.348	Jaculus_jaculus
ENSPMGG00000011577	tsr1	99	79.373	ENSKMAG00000005763	tsr1	99	80.193	Kryptolebias_marmoratus
ENSPMGG00000011577	tsr1	99	78.992	ENSLBEG00000021823	tsr1	99	81.873	Labrus_bergylta
ENSPMGG00000011577	tsr1	99	57.660	ENSLACG00000002197	TSR1	99	57.869	Latimeria_chalumnae
ENSPMGG00000011577	tsr1	92	76.000	ENSLOCG00000006491	TSR1	99	58.596	Lepisosteus_oculatus
ENSPMGG00000011577	tsr1	97	57.659	ENSMFAG00000021330	TSR1	98	58.032	Macaca_fascicularis
ENSPMGG00000011577	tsr1	97	57.659	ENSMMUG00000017519	TSR1	98	57.908	Macaca_mulatta
ENSPMGG00000011577	tsr1	97	57.659	ENSMNEG00000031382	TSR1	98	58.032	Macaca_nemestrina
ENSPMGG00000011577	tsr1	97	57.285	ENSMLEG00000036733	TSR1	98	57.659	Mandrillus_leucophaeus
ENSPMGG00000011577	tsr1	99	80.526	ENSMAMG00000017918	tsr1	99	82.198	Mastacembelus_armatus
ENSPMGG00000011577	tsr1	99	82.126	ENSMZEG00005007477	tsr1	99	82.246	Maylandia_zebra
ENSPMGG00000011577	tsr1	99	58.902	ENSMGAG00000005576	TSR1	99	58.902	Meleagris_gallopavo
ENSPMGG00000011577	tsr1	98	58.479	ENSMICG00000012943	TSR1	99	58.603	Microcebus_murinus
ENSPMGG00000011577	tsr1	99	56.473	ENSMOCG00000022764	Tsr1	99	56.227	Microtus_ochrogaster
ENSPMGG00000011577	tsr1	99	82.847	ENSMMOG00000014280	tsr1	99	82.989	Mola_mola
ENSPMGG00000011577	tsr1	98	58.816	ENSMODG00000010658	TSR1	99	58.650	Monodelphis_domestica
ENSPMGG00000011577	tsr1	99	81.010	ENSMALG00000011681	tsr1	99	82.692	Monopterus_albus
ENSPMGG00000011577	tsr1	99	56.049	MGP_CAROLIEiJ_G0016727	Tsr1	99	55.474	Mus_caroli
ENSPMGG00000011577	tsr1	99	56.420	ENSMUSG00000038335	Tsr1	99	55.843	Mus_musculus
ENSPMGG00000011577	tsr1	99	57.073	MGP_PahariEiJ_G0017864	Tsr1	99	55.966	Mus_pahari
ENSPMGG00000011577	tsr1	99	56.543	MGP_SPRETEiJ_G0017570	Tsr1	99	55.966	Mus_spretus
ENSPMGG00000011577	tsr1	80	59.002	ENSMPUG00000013000	TSR1	99	58.699	Mustela_putorius_furo
ENSPMGG00000011577	tsr1	98	58.736	ENSMLUG00000003505	TSR1	99	58.582	Myotis_lucifugus
ENSPMGG00000011577	tsr1	99	81.807	ENSNBRG00000020728	tsr1	99	81.928	Neolamprologus_brichardi
ENSPMGG00000011577	tsr1	98	53.367	ENSNLEG00000017184	TSR1	99	53.990	Nomascus_leucogenys
ENSPMGG00000011577	tsr1	99	54.300	ENSMEUG00000015828	TSR1	99	53.406	Notamacropus_eugenii
ENSPMGG00000011577	tsr1	99	81.356	ENSONIG00000013131	tsr1	99	81.356	Oreochromis_niloticus
ENSPMGG00000011577	tsr1	94	56.701	ENSOANG00000008637	TSR1	99	55.841	Ornithorhynchus_anatinus
ENSPMGG00000011577	tsr1	99	57.531	ENSOCUG00000014256	TSR1	99	57.531	Oryctolagus_cuniculus
ENSPMGG00000011577	tsr1	99	78.099	ENSORLG00000004926	tsr1	99	78.966	Oryzias_latipes
ENSPMGG00000011577	tsr1	99	78.649	ENSORLG00020008792	tsr1	99	79.157	Oryzias_latipes_hni
ENSPMGG00000011577	tsr1	99	78.219	ENSORLG00015013838	tsr1	99	79.087	Oryzias_latipes_hsok
ENSPMGG00000011577	tsr1	99	78.726	ENSOMEG00000004830	tsr1	99	80.338	Oryzias_melastigma
ENSPMGG00000011577	tsr1	98	57.583	ENSOGAG00000004492	TSR1	99	57.460	Otolemur_garnettii
ENSPMGG00000011577	tsr1	99	57.160	ENSOARG00000015437	TSR1	97	57.407	Ovis_aries
ENSPMGG00000011577	tsr1	98	57.338	ENSPPAG00000036355	TSR1	99	57.463	Pan_paniscus
ENSPMGG00000011577	tsr1	99	56.489	ENSPPRG00000015519	-	99	56.650	Panthera_pardus
ENSPMGG00000011577	tsr1	99	56.489	ENSPTIG00000010608	TSR1	99	56.650	Panthera_tigris_altaica
ENSPMGG00000011577	tsr1	98	57.338	ENSPTRG00000008547	TSR1	99	57.463	Pan_troglodytes
ENSPMGG00000011577	tsr1	97	55.168	ENSPANG00000024463	TSR1	98	56.040	Papio_anubis
ENSPMGG00000011577	tsr1	99	70.762	ENSPKIG00000013972	tsr1	99	71.168	Paramormyrops_kingsleyae
ENSPMGG00000011577	tsr1	85	57.977	ENSPSIG00000018258	TSR1	99	57.872	Pelodiscus_sinensis
ENSPMGG00000011577	tsr1	99	55.857	ENSPEMG00000018033	Tsr1	99	54.914	Peromyscus_maniculatus_bairdii
ENSPMGG00000011577	tsr1	98	58.663	ENSPCIG00000009357	TSR1	97	58.940	Phascolarctos_cinereus
ENSPMGG00000011577	tsr1	99	78.762	ENSPFOG00000004483	TSR1	99	79.879	Poecilia_formosa
ENSPMGG00000011577	tsr1	99	77.098	ENSPLAG00000022320	tsr1	99	78.563	Poecilia_latipinna
ENSPMGG00000011577	tsr1	99	77.458	ENSPMEG00000004577	tsr1	99	78.683	Poecilia_mexicana
ENSPMGG00000011577	tsr1	97	77.586	ENSPREG00000010354	tsr1	96	78.844	Poecilia_reticulata
ENSPMGG00000011577	tsr1	98	51.784	ENSPPYG00000007792	TSR1	99	52.522	Pongo_abelii
ENSPMGG00000011577	tsr1	52	65.116	ENSPCAG00000012973	-	70	65.116	Procavia_capensis
ENSPMGG00000011577	tsr1	98	57.980	ENSPCOG00000017928	TSR1	99	58.177	Propithecus_coquereli
ENSPMGG00000011577	tsr1	99	57.494	ENSPVAG00000002162	TSR1	99	57.811	Pteropus_vampyrus
ENSPMGG00000011577	tsr1	99	81.939	ENSPNYG00000016163	tsr1	99	82.061	Pundamilia_nyererei
ENSPMGG00000011577	tsr1	99	72.792	ENSPNAG00000008659	tsr1	99	73.031	Pygocentrus_nattereri
ENSPMGG00000011577	tsr1	99	55.556	ENSRNOG00000002980	Tsr1	99	55.583	Rattus_norvegicus
ENSPMGG00000011577	tsr1	97	57.783	ENSRBIG00000040016	TSR1	98	58.012	Rhinopithecus_bieti
ENSPMGG00000011577	tsr1	97	57.783	ENSRROG00000030361	TSR1	98	58.012	Rhinopithecus_roxellana
ENSPMGG00000011577	tsr1	98	57.267	ENSSBOG00000020785	TSR1	99	57.516	Saimiri_boliviensis_boliviensis
ENSPMGG00000011577	tsr1	98	58.582	ENSSHAG00000011394	TSR1	99	58.831	Sarcophilus_harrisii
ENSPMGG00000011577	tsr1	99	74.632	ENSSFOG00015005455	tsr1	99	75.123	Scleropages_formosus
ENSPMGG00000011577	tsr1	100	79.137	ENSSMAG00000009504	tsr1	99	80.168	Scophthalmus_maximus
ENSPMGG00000011577	tsr1	99	81.393	ENSSDUG00000012074	tsr1	99	82.635	Seriola_dumerili
ENSPMGG00000011577	tsr1	99	82.310	ENSSLDG00000002031	tsr1	99	82.953	Seriola_lalandi_dorsalis
ENSPMGG00000011577	tsr1	92	55.422	ENSSARG00000000759	TSR1	93	55.422	Sorex_araneus
ENSPMGG00000011577	tsr1	99	59.828	ENSSPUG00000007042	TSR1	99	59.337	Sphenodon_punctatus
ENSPMGG00000011577	tsr1	100	81.862	ENSSPAG00000021951	tsr1	99	83.035	Stegastes_partitus
ENSPMGG00000011577	tsr1	99	57.617	ENSSSCG00000038534	TSR1	99	57.494	Sus_scrofa
ENSPMGG00000011577	tsr1	89	62.721	ENSTGUG00000005883	TSR1	100	62.721	Taeniopygia_guttata
ENSPMGG00000011577	tsr1	99	79.394	ENSTRUG00000004665	tsr1	99	80.485	Takifugu_rubripes
ENSPMGG00000011577	tsr1	99	80.395	ENSTNIG00000016196	tsr1	99	80.764	Tetraodon_nigroviridis
ENSPMGG00000011577	tsr1	65	71.654	ENSTBEG00000015275	-	66	72.222	Tupaia_belangeri
ENSPMGG00000011577	tsr1	99	57.778	ENSTTRG00000001177	TSR1	99	57.654	Tursiops_truncatus
ENSPMGG00000011577	tsr1	99	56.931	ENSUAMG00000025160	TSR1	99	56.931	Ursus_americanus
ENSPMGG00000011577	tsr1	95	56.650	ENSUMAG00000009294	TSR1	98	56.650	Ursus_maritimus
ENSPMGG00000011577	tsr1	83	51.982	ENSVPAG00000000228	TSR1	99	51.092	Vicugna_pacos
ENSPMGG00000011577	tsr1	98	56.506	ENSVVUG00000021767	TSR1	99	56.858	Vulpes_vulpes
ENSPMGG00000011577	tsr1	99	54.424	ENSXETG00000023797	tsr1	99	52.563	Xenopus_tropicalis
ENSPMGG00000011577	tsr1	99	79.707	ENSXCOG00000009635	tsr1	99	78.858	Xiphophorus_couchianus
ENSPMGG00000011577	tsr1	99	78.528	ENSXMAG00000001397	tsr1	97	79.131	Xiphophorus_maculatus