EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPMGG00000011589 (Gene tree)
Gene ID
-
Gene Symbol
rpa1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Periophthalmus_magnuspinnatus
Status
putative
Strand
Minus strand
Length
10700 bases
Position
chrKN468313.1:1109913-1120612
Accession
ZDB-GENE-030912-3
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMGP00000014113tRNA_anti-codonPF01336.257.9e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMGT00000015057-1707-ENSPMGP00000014113568 (aa)--
Gene Model
Click here to download ENSPMGG00000011589's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000011589's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMGG00000011589rpa19783.662ENSAPOG00000011658rpa19983.662Acanthochromis_polyacanthus
ENSPMGG00000011589rpa19669.457ENSAPOG00000019409RPA18169.457Acanthochromis_polyacanthus
ENSPMGG00000011589rpa19961.755ENSAMEG00000007706RPA19861.589Ailuropoda_melanoleuca
ENSPMGG00000011589rpa19862.010ENSACIG00000012881RPA19962.010Amphilophus_citrinellus
ENSPMGG00000011589rpa19873.868ENSACIG00000007277rpa19973.868Amphilophus_citrinellus
ENSPMGG00000011589rpa19858.682ENSAOCG00000009003RPA19658.880Amphiprion_ocellaris
ENSPMGG00000011589rpa19783.513ENSAOCG00000023376rpa19983.513Amphiprion_ocellaris
ENSPMGG00000011589rpa19669.866ENSAPEG00000019132RPA18269.866Amphiprion_percula
ENSPMGG00000011589rpa19784.079ENSAPEG00000008634rpa19984.079Amphiprion_percula
ENSPMGG00000011589rpa19785.080ENSATEG00000022024rpa19985.080Anabas_testudineus
ENSPMGG00000011589rpa19957.935ENSATEG00000006443RPA19957.935Anabas_testudineus
ENSPMGG00000011589rpa19853.718ENSAPLG00000012442RPA19853.869Anas_platyrhynchos
ENSPMGG00000011589rpa19958.221ENSACAG00000014490RPA19958.221Anolis_carolinensis
ENSPMGG00000011589rpa19865.714ENSANAG00000023456RPA19765.536Aotus_nancymaae
ENSPMGG00000011589rpa19860.359ENSACLG00000005223RPA19661.175Astatotilapia_calliptera
ENSPMGG00000011589rpa19685.560ENSACLG00000006640rpa19985.560Astatotilapia_calliptera
ENSPMGG00000011589rpa19879.785ENSAMXG00000008418rpa19979.785Astyanax_mexicanus
ENSPMGG00000011589rpa19961.692ENSBTAG00000009711RPA19861.526Bos_taurus
ENSPMGG00000011589rpa17532.723WBGene00017546rpa-16532.265Caenorhabditis_elegans
ENSPMGG00000011589rpa19861.670ENSCJAG00000001848RPA19959.772Callithrix_jacchus
ENSPMGG00000011589rpa19962.023ENSCAFG00000019249RPA19862.521Canis_familiaris
ENSPMGG00000011589rpa19962.023ENSCAFG00020009847RPA19862.521Canis_lupus_dingo
ENSPMGG00000011589rpa19962.355ENSCHIG00000026308RPA19862.023Capra_hircus
ENSPMGG00000011589rpa19961.424ENSTSYG00000003482-9861.258Carlito_syrichta
ENSPMGG00000011589rpa19961.692ENSCPOG00000000035RPA19861.526Cavia_porcellus
ENSPMGG00000011589rpa19950.814ENSCCAG00000010981RPA19950.651Cebus_capucinus
ENSPMGG00000011589rpa19962.023ENSCLAG00000005185-9861.857Chinchilla_lanigera
ENSPMGG00000011589rpa19958.140ENSCLAG00000015045-9858.140Chinchilla_lanigera
ENSPMGG00000011589rpa110052.152ENSCSAG00000013833RPA19851.987Chlorocebus_sabaeus
ENSPMGG00000011589rpa17670.872ENSCHOG00000009454-9970.642Choloepus_hoffmanni
ENSPMGG00000011589rpa19861.433ENSCHOG00000013540-9961.263Choloepus_hoffmanni
ENSPMGG00000011589rpa19961.412ENSCPBG00000020377RPA19963.028Chrysemys_picta_bellii
ENSPMGG00000011589rpa19941.625ENSCING00000023482-9941.625Ciona_intestinalis
ENSPMGG00000011589rpa110064.594ENSCANG00000030911RPA19964.421Colobus_angolensis_palliatus
ENSPMGG00000011589rpa19961.386ENSCGRG00001008197Rpa19861.221Cricetulus_griseus_chok1gshd
ENSPMGG00000011589rpa17870.404ENSCGRG00000000582Rpa18770.179Cricetulus_griseus_crigri
ENSPMGG00000011589rpa19655.330ENSCSEG00000012726RPA19956.014Cynoglossus_semilaevis
ENSPMGG00000011589rpa19979.553ENSCSEG00000013066rpa19979.553Cynoglossus_semilaevis
ENSPMGG00000011589rpa19977.704ENSCVAG00000019431rpa19981.408Cyprinodon_variegatus
ENSPMGG00000011589rpa19470.283ENSCVAG00000013446-8270.283Cyprinodon_variegatus
ENSPMGG00000011589rpa19972.074ENSDARG00000003938rpa19972.074Danio_rerio
ENSPMGG00000011589rpa19962.852ENSDNOG00000017218RPA19862.687Dasypus_novemcinctus
ENSPMGG00000011589rpa19863.113ENSDORG00000006199Rpa19961.564Dipodomys_ordii
ENSPMGG00000011589rpa19843.058FBgn0010173RpA-709443.007Drosophila_melanogaster
ENSPMGG00000011589rpa18275.258ENSETEG00000017608RPA18175.258Echinops_telfairi
ENSPMGG00000011589rpa19865.653ENSEASG00005009372RPA19966.062Equus_asinus_asinus
ENSPMGG00000011589rpa19961.692ENSECAG00000023886RPA19861.692Equus_caballus
ENSPMGG00000011589rpa17371.053ENSEEUG00000002186-6870.813Erinaceus_europaeus
ENSPMGG00000011589rpa19064.093ENSELUG00000006136RPA19964.093Esox_lucius
ENSPMGG00000011589rpa19976.333ENSELUG00000021071rpa19976.333Esox_lucius
ENSPMGG00000011589rpa19961.589ENSFCAG00000006306RPA19861.424Felis_catus
ENSPMGG00000011589rpa19960.755ENSFALG00000006575RPA19960.591Ficedula_albicollis
ENSPMGG00000011589rpa19962.355ENSFDAG00000007720RPA19862.189Fukomys_damarensis
ENSPMGG00000011589rpa19879.896ENSFHEG00000003580rpa19579.896Fundulus_heteroclitus
ENSPMGG00000011589rpa19976.592ENSGMOG00000010382rpa19976.592Gadus_morhua
ENSPMGG00000011589rpa19959.934ENSGALG00000003072RPA19959.770Gallus_gallus
ENSPMGG00000011589rpa19859.141ENSGAFG00000020953RPA19659.141Gambusia_affinis
ENSPMGG00000011589rpa19880.708ENSGAFG00000012916rpa19680.708Gambusia_affinis
ENSPMGG00000011589rpa19978.037ENSGACG00000010856rpa19978.037Gasterosteus_aculeatus
ENSPMGG00000011589rpa19961.084ENSGAGG00000013611RPA19960.920Gopherus_agassizii
ENSPMGG00000011589rpa19963.823ENSGGOG00000014186RPA19963.652Gorilla_gorilla
ENSPMGG00000011589rpa19884.859ENSHBUG00000017773rpa19981.970Haplochromis_burtoni
ENSPMGG00000011589rpa19958.854ENSHBUG00000009348RPA19959.194Haplochromis_burtoni
ENSPMGG00000011589rpa19962.189ENSHGLG00000008846RPA19862.023Heterocephalus_glaber_female
ENSPMGG00000011589rpa19958.209ENSHGLG00100000799-9858.043Heterocephalus_glaber_male
ENSPMGG00000011589rpa19962.189ENSHGLG00100017755-9862.023Heterocephalus_glaber_male
ENSPMGG00000011589rpa19952.736ENSHGLG00100002005-9852.736Heterocephalus_glaber_male
ENSPMGG00000011589rpa19972.295ENSHCOG00000001401rpa19972.295Hippocampus_comes
ENSPMGG00000011589rpa19946.325ENSHCOG00000000351RPA19845.983Hippocampus_comes
ENSPMGG00000011589rpa19973.798ENSIPUG00000004400rpa19973.798Ictalurus_punctatus
ENSPMGG00000011589rpa19560.611ENSSTOG00000022475RPA19860.441Ictidomys_tridecemlineatus
ENSPMGG00000011589rpa19862.925ENSJJAG00000000876Rpa19862.755Jaculus_jaculus
ENSPMGG00000011589rpa19975.658ENSKMAG00000005605rpa19975.658Kryptolebias_marmoratus
ENSPMGG00000011589rpa19862.069ENSKMAG00000000234RPA19662.069Kryptolebias_marmoratus
ENSPMGG00000011589rpa19768.904ENSLBEG00000002281RPA17969.300Labrus_bergylta
ENSPMGG00000011589rpa19980.651ENSLBEG00000021604rpa19980.651Labrus_bergylta
ENSPMGG00000011589rpa17765.986ENSLACG00000007210RPA18965.760Latimeria_chalumnae
ENSPMGG00000011589rpa19969.435ENSLOCG00000006397rpa19969.435Lepisosteus_oculatus
ENSPMGG00000011589rpa19961.111ENSLAFG00000015354RPA19860.948Loxodonta_africana
ENSPMGG00000011589rpa18359.684ENSMFAG00000036138-10059.486Macaca_fascicularis
ENSPMGG00000011589rpa110062.086ENSMMUG00000011604-9961.921Macaca_mulatta
ENSPMGG00000011589rpa19956.486ENSMMUG00000002442-9956.322Macaca_mulatta
ENSPMGG00000011589rpa19962.479ENSMNEG00000031632-9962.312Macaca_nemestrina
ENSPMGG00000011589rpa19955.688ENSMNEG00000029837-9955.518Macaca_nemestrina
ENSPMGG00000011589rpa19858.814ENSMLEG00000038768-9758.814Mandrillus_leucophaeus
ENSPMGG00000011589rpa19370.930ENSMAMG00000020097RPA18468.904Mastacembelus_armatus
ENSPMGG00000011589rpa19786.545ENSMAMG00000017993rpa19986.545Mastacembelus_armatus
ENSPMGG00000011589rpa19981.970ENSMZEG00005007551rpa19981.970Maylandia_zebra
ENSPMGG00000011589rpa19860.359ENSMZEG00005024731RPA19661.175Maylandia_zebra
ENSPMGG00000011589rpa19861.473ENSMGAG00000005315RPA19561.301Meleagris_gallopavo
ENSPMGG00000011589rpa19862.842ENSMAUG00000010474Rpa19762.671Mesocricetus_auratus
ENSPMGG00000011589rpa19960.899ENSMICG00000012867RPA19861.231Microcebus_murinus
ENSPMGG00000011589rpa19862.500ENSMOCG00000013019Rpa19562.329Microtus_ochrogaster
ENSPMGG00000011589rpa19980.684ENSMMOG00000014292rpa19980.836Mola_mola
ENSPMGG00000011589rpa19862.762ENSMMOG00000010868RPA19562.762Mola_mola
ENSPMGG00000011589rpa19961.047ENSMODG00000010549RPA19960.884Monodelphis_domestica
ENSPMGG00000011589rpa19569.820ENSMALG00000001208RPA17869.820Monopterus_albus
ENSPMGG00000011589rpa19981.345ENSMALG00000011453rpa19981.345Monopterus_albus
ENSPMGG00000011589rpa19960.496MGP_CAROLIEiJ_G0016734Rpa19860.331Mus_caroli
ENSPMGG00000011589rpa19960.130ENSMUSG00000000751Rpa19959.547Mus_musculus
ENSPMGG00000011589rpa19961.450MGP_PahariEiJ_G0017871Rpa19861.285Mus_pahari
ENSPMGG00000011589rpa19960.032MGP_SPRETEiJ_G0017577Rpa19959.451Mus_spretus
ENSPMGG00000011589rpa19962.023ENSMPUG00000013119RPA19861.857Mustela_putorius_furo
ENSPMGG00000011589rpa19862.628ENSMLUG00000006113RPA19462.457Myotis_lucifugus
ENSPMGG00000011589rpa19862.351ENSNGAG00000004522Rpa19462.181Nannospalax_galili
ENSPMGG00000011589rpa19860.976ENSNBRG00000009672RPA19460.976Neolamprologus_brichardi
ENSPMGG00000011589rpa19785.179ENSNBRG00000020595rpa19985.179Neolamprologus_brichardi
ENSPMGG00000011589rpa19960.685ENSNLEG00000017149RPA19960.685Nomascus_leucogenys
ENSPMGG00000011589rpa19854.188ENSMEUG00000006714RPA19654.017Notamacropus_eugenii
ENSPMGG00000011589rpa19861.102ENSODEG00000009038RPA19760.935Octodon_degus
ENSPMGG00000011589rpa19980.033ENSONIG00000013135rpa19980.033Oreochromis_niloticus
ENSPMGG00000011589rpa19863.373ENSOANG00000010880RPA19763.203Ornithorhynchus_anatinus
ENSPMGG00000011589rpa19958.926ENSOCUG00000001504RPA19858.768Oryctolagus_cuniculus
ENSPMGG00000011589rpa19979.229ENSORLG00000004856rpa19979.229Oryzias_latipes
ENSPMGG00000011589rpa19965.319ENSORLG00000003368RPA18767.033Oryzias_latipes
ENSPMGG00000011589rpa19979.229ENSORLG00020008980rpa19979.229Oryzias_latipes_hni
ENSPMGG00000011589rpa19568.254ENSORLG00020015284RPA18368.254Oryzias_latipes_hni
ENSPMGG00000011589rpa19979.229ENSORLG00015013982rpa19979.229Oryzias_latipes_hsok
ENSPMGG00000011589rpa17466.353ENSORLG00015005867-9766.353Oryzias_latipes_hsok
ENSPMGG00000011589rpa19955.781ENSORLG00015020383RPA19955.781Oryzias_latipes_hsok
ENSPMGG00000011589rpa19975.418ENSOMEG00000004704rpa19975.418Oryzias_melastigma
ENSPMGG00000011589rpa19758.803ENSOMEG00000011040RPA19958.803Oryzias_melastigma
ENSPMGG00000011589rpa19962.023ENSOGAG00000005581-9861.857Otolemur_garnettii
ENSPMGG00000011589rpa17475.275ENSOGAG00000029379-9575.568Otolemur_garnettii
ENSPMGG00000011589rpa19962.355ENSOARG00000014479RPA19862.023Ovis_aries
ENSPMGG00000011589rpa19960.848ENSPPAG00000039680RPA19960.848Pan_paniscus
ENSPMGG00000011589rpa19961.424ENSPPRG00000011807RPA19861.258Panthera_pardus
ENSPMGG00000011589rpa19961.424ENSPTIG00000007898RPA19861.258Panthera_tigris_altaica
ENSPMGG00000011589rpa19961.011ENSPTRG00000008539RPA19961.011Pan_troglodytes
ENSPMGG00000011589rpa110061.921ENSPANG00000024592RPA19861.755Papio_anubis
ENSPMGG00000011589rpa19970.230ENSPKIG00000008053rpa19970.230Paramormyrops_kingsleyae
ENSPMGG00000011589rpa19862.906ENSPSIG00000015617RPA19762.735Pelodiscus_sinensis
ENSPMGG00000011589rpa19963.492ENSPMGG00000000543RPA19963.784Periophthalmus_magnuspinnatus
ENSPMGG00000011589rpa19962.396ENSPEMG00000021061Rpa19862.230Peromyscus_maniculatus_bairdii
ENSPMGG00000011589rpa19960.784ENSPCIG00000019049RPA19960.621Phascolarctos_cinereus
ENSPMGG00000011589rpa19879.581ENSPFOG00000003987rpa19977.129Poecilia_formosa
ENSPMGG00000011589rpa19457.443ENSPLAG00000008844-9657.443Poecilia_latipinna
ENSPMGG00000011589rpa19976.962ENSPLAG00000004984rpa19976.962Poecilia_latipinna
ENSPMGG00000011589rpa19456.585ENSPMEG00000003627-9656.585Poecilia_mexicana
ENSPMGG00000011589rpa19879.756ENSPMEG00000020602rpa19979.537Poecilia_mexicana
ENSPMGG00000011589rpa19671.429ENSPREG00000010119RPA18371.429Poecilia_reticulata
ENSPMGG00000011589rpa19370.916ENSPREG00000010174rpa19670.916Poecilia_reticulata
ENSPMGG00000011589rpa19961.897ENSPCOG00000001799RPA19861.730Propithecus_coquereli
ENSPMGG00000011589rpa19960.848ENSPVAG00000002149RPA19960.685Pteropus_vampyrus
ENSPMGG00000011589rpa19685.586ENSPNYG00000016316rpa19985.586Pundamilia_nyererei
ENSPMGG00000011589rpa19860.196ENSPNYG00000024165RPA19661.011Pundamilia_nyererei
ENSPMGG00000011589rpa19868.827ENSPNAG00000008599rpa19966.835Pygocentrus_nattereri
ENSPMGG00000011589rpa19869.417ENSRNOG00000003123Rpa19861.730Rattus_norvegicus
ENSPMGG00000011589rpa110061.755ENSRBIG00000036587RPA19861.589Rhinopithecus_bieti
ENSPMGG00000011589rpa110056.954ENSRROG00000043278RPA19856.788Rhinopithecus_roxellana
ENSPMGG00000011589rpa17338.152YAR007CRFA16837.793Saccharomyces_cerevisiae
ENSPMGG00000011589rpa19363.214ENSSBOG00000030233RPA19763.036Saimiri_boliviensis_boliviensis
ENSPMGG00000011589rpa19862.925ENSSHAG00000007969RPA19562.755Sarcophilus_harrisii
ENSPMGG00000011589rpa19976.294ENSSFOG00015005362rpa19276.127Scleropages_formosus
ENSPMGG00000011589rpa19570.759ENSSMAG00000019746RPA18170.759Scophthalmus_maximus
ENSPMGG00000011589rpa19372.917ENSSDUG00000016358RPA18572.603Seriola_dumerili
ENSPMGG00000011589rpa19887.299ENSSDUG00000011949rpa19687.299Seriola_dumerili
ENSPMGG00000011589rpa19887.299ENSSLDG00000011806rpa19687.299Seriola_lalandi_dorsalis
ENSPMGG00000011589rpa19372.454ENSSLDG00000020784RPA18072.146Seriola_lalandi_dorsalis
ENSPMGG00000011589rpa19948.671ENSSARG00000007506RPA19948.671Sorex_araneus
ENSPMGG00000011589rpa19861.274ENSSPUG00000007223RPA19761.102Sphenodon_punctatus
ENSPMGG00000011589rpa19981.271ENSSPAG00000009903rpa19981.271Stegastes_partitus
ENSPMGG00000011589rpa19962.692ENSSPAG00000011165RPA19962.692Stegastes_partitus
ENSPMGG00000011589rpa19964.757ENSSSCG00000017822RPA19864.583Sus_scrofa
ENSPMGG00000011589rpa19959.638ENSTGUG00000005775RPA19959.473Taeniopygia_guttata
ENSPMGG00000011589rpa19979.496ENSTRUG00000003616rpa19979.630Takifugu_rubripes
ENSPMGG00000011589rpa19369.860ENSTRUG00000000405RPA17868.778Takifugu_rubripes
ENSPMGG00000011589rpa19979.276ENSTNIG00000016199rpa19978.947Tetraodon_nigroviridis
ENSPMGG00000011589rpa17671.789ENSTBEG00000002709RPA17371.071Tupaia_belangeri
ENSPMGG00000011589rpa19862.287ENSTTRG00000001169RPA19562.628Tursiops_truncatus
ENSPMGG00000011589rpa18973.077ENSUAMG00000015676RPA19773.077Ursus_americanus
ENSPMGG00000011589rpa19964.410ENSUMAG00000009328RPA19864.236Ursus_maritimus
ENSPMGG00000011589rpa19960.631ENSVPAG00000009443RPA19860.465Vicugna_pacos
ENSPMGG00000011589rpa19961.857ENSVVUG00000021715RPA19862.355Vulpes_vulpes
ENSPMGG00000011589rpa19966.063ENSXETG00000013538rpa19966.392Xenopus_tropicalis
ENSPMGG00000011589rpa19862.943ENSXCOG00000009899-10062.943Xiphophorus_couchianus
ENSPMGG00000011589rpa19378.755ENSXCOG00000010068rpa19578.755Xiphophorus_couchianus
ENSPMGG00000011589rpa19878.709ENSXMAG00000004102rpa19978.456Xiphophorus_maculatus
ENSPMGG00000011589rpa19670.759ENSXMAG00000010333RPA18170.759Xiphophorus_maculatus

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