EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000011742 (Gene tree)
Gene ID: -
Gene Symbol: rnpc3
Alias: -
Full Name: RNA-binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 29881 bases
Position: chrKN463075.1:4867-34747
Accession: ZDB-GENE-060312-35
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000014333	RRM_1	PF00076.22	7.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000015293	-	1503	-	ENSPMGP00000014333	500 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000011742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000011742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000011742	rnpc3	95	52.535	ENSG00000185946	RNPC3	100	51.449	Homo_sapiens
ENSPMGG00000011742	rnpc3	100	65.949	ENSAPOG00000017371	rnpc3	99	65.753	Acanthochromis_polyacanthus
ENSPMGG00000011742	rnpc3	95	52.254	ENSAMEG00000001694	RNPC3	93	51.738	Ailuropoda_melanoleuca
ENSPMGG00000011742	rnpc3	99	65.098	ENSACIG00000021043	rnpc3	99	66.078	Amphilophus_citrinellus
ENSPMGG00000011742	rnpc3	100	65.166	ENSAOCG00000014052	rnpc3	98	64.971	Amphiprion_ocellaris
ENSPMGG00000011742	rnpc3	100	65.166	ENSAPEG00000008739	rnpc3	98	64.971	Amphiprion_percula
ENSPMGG00000011742	rnpc3	100	64.660	ENSATEG00000021263	rnpc3	99	65.049	Anabas_testudineus
ENSPMGG00000011742	rnpc3	89	51.732	ENSAPLG00000015605	RNPC3	100	51.515	Anas_platyrhynchos
ENSPMGG00000011742	rnpc3	95	53.374	ENSACAG00000002029	RNPC3	93	52.965	Anolis_carolinensis
ENSPMGG00000011742	rnpc3	95	52.333	ENSANAG00000019950	RNPC3	93	51.619	Aotus_nancymaae
ENSPMGG00000011742	rnpc3	98	65.408	ENSACLG00000014702	rnpc3	99	65.680	Astatotilapia_calliptera
ENSPMGG00000011742	rnpc3	99	60.232	ENSAMXG00000033372	rnpc3	99	60.269	Astyanax_mexicanus
ENSPMGG00000011742	rnpc3	95	52.675	ENSBTAG00000019091	RNPC3	93	51.951	Bos_taurus
ENSPMGG00000011742	rnpc3	95	52.697	ENSCJAG00000035686	RNPC3	93	51.967	Callithrix_jacchus
ENSPMGG00000011742	rnpc3	95	52.333	ENSCAFG00000019972	RNPC3	93	51.822	Canis_familiaris
ENSPMGG00000011742	rnpc3	95	52.361	ENSCAFG00020011300	RNPC3	93	51.844	Canis_lupus_dingo
ENSPMGG00000011742	rnpc3	95	52.772	ENSCHIG00000020361	RNPC3	93	51.639	Capra_hircus
ENSPMGG00000011742	rnpc3	95	51.220	ENSTSYG00000030256	RNPC3	93	51.116	Carlito_syrichta
ENSPMGG00000011742	rnpc3	85	45.995	ENSCAPG00000013600	RNPC3	97	45.370	Cavia_aperea
ENSPMGG00000011742	rnpc3	95	51.626	ENSCPOG00000031638	RNPC3	93	51.016	Cavia_porcellus
ENSPMGG00000011742	rnpc3	95	52.333	ENSCCAG00000024301	RNPC3	93	51.619	Cebus_capucinus
ENSPMGG00000011742	rnpc3	95	52.227	ENSCATG00000002086	RNPC3	93	51.717	Cercocebus_atys
ENSPMGG00000011742	rnpc3	95	50.205	ENSCLAG00000005169	RNPC3	93	50.612	Chinchilla_lanigera
ENSPMGG00000011742	rnpc3	95	52.227	ENSCSAG00000001519	RNPC3	93	51.717	Chlorocebus_sabaeus
ENSPMGG00000011742	rnpc3	97	51.600	ENSCPBG00000028311	RNPC3	95	51.600	Chrysemys_picta_bellii
ENSPMGG00000011742	rnpc3	62	55.303	ENSCSAVG00000002800	-	73	58.678	Ciona_savignyi
ENSPMGG00000011742	rnpc3	95	51.919	ENSCANG00000031444	RNPC3	93	51.210	Colobus_angolensis_palliatus
ENSPMGG00000011742	rnpc3	95	50.916	ENSCGRG00001019276	Rnpc3	94	51.324	Cricetulus_griseus_chok1gshd
ENSPMGG00000011742	rnpc3	87	49.667	ENSCGRG00000000053	Rnpc3	98	50.111	Cricetulus_griseus_crigri
ENSPMGG00000011742	rnpc3	98	62.698	ENSCSEG00000013475	rnpc3	97	63.492	Cynoglossus_semilaevis
ENSPMGG00000011742	rnpc3	100	63.495	ENSCVAG00000002645	rnpc3	99	63.883	Cyprinodon_variegatus
ENSPMGG00000011742	rnpc3	97	61.569	ENSDARG00000011247	rnpc3	92	70.286	Danio_rerio
ENSPMGG00000011742	rnpc3	95	51.329	ENSDNOG00000044555	-	93	50.816	Dasypus_novemcinctus
ENSPMGG00000011742	rnpc3	95	51.738	ENSDNOG00000047498	-	93	51.224	Dasypus_novemcinctus
ENSPMGG00000011742	rnpc3	97	51.509	ENSDORG00000027343	Rnpc3	95	50.803	Dipodomys_ordii
ENSPMGG00000011742	rnpc3	97	50.392	ENSEBUG00000002068	rnpc3	97	46.589	Eptatretus_burgeri
ENSPMGG00000011742	rnpc3	95	52.041	ENSEASG00005015957	RNPC3	93	51.527	Equus_asinus_asinus
ENSPMGG00000011742	rnpc3	95	51.619	ENSECAG00000021148	RNPC3	93	51.215	Equus_caballus
ENSPMGG00000011742	rnpc3	96	61.155	ENSELUG00000002264	rnpc3	98	60.311	Esox_lucius
ENSPMGG00000011742	rnpc3	96	52.227	ENSFCAG00000024312	RNPC3	94	51.822	Felis_catus
ENSPMGG00000011742	rnpc3	89	52.278	ENSFALG00000002580	RNPC3	100	52.061	Ficedula_albicollis
ENSPMGG00000011742	rnpc3	95	51.829	ENSFDAG00000019948	RNPC3	93	51.220	Fukomys_damarensis
ENSPMGG00000011742	rnpc3	99	61.220	ENSFHEG00000020647	rnpc3	100	60.511	Fundulus_heteroclitus
ENSPMGG00000011742	rnpc3	96	65.844	ENSGMOG00000019213	rnpc3	95	63.975	Gadus_morhua
ENSPMGG00000011742	rnpc3	95	53.036	ENSGALG00000005162	RNPC3	88	52.183	Gallus_gallus
ENSPMGG00000011742	rnpc3	99	63.477	ENSGAFG00000017236	rnpc3	100	63.867	Gambusia_affinis
ENSPMGG00000011742	rnpc3	98	64.286	ENSGACG00000002048	rnpc3	97	65.278	Gasterosteus_aculeatus
ENSPMGG00000011742	rnpc3	97	51.800	ENSGAGG00000008438	RNPC3	95	51.800	Gopherus_agassizii
ENSPMGG00000011742	rnpc3	96	44.376	ENSGGOG00000026201	-	93	44.376	Gorilla_gorilla
ENSPMGG00000011742	rnpc3	81	69.767	ENSHBUG00000015966	rnpc3	84	68.085	Haplochromis_burtoni
ENSPMGG00000011742	rnpc3	95	51.423	ENSHGLG00000001708	RNPC3	93	50.813	Heterocephalus_glaber_female
ENSPMGG00000011742	rnpc3	95	51.423	ENSHGLG00100003005	RNPC3	93	50.813	Heterocephalus_glaber_male
ENSPMGG00000011742	rnpc3	100	61.719	ENSHCOG00000017135	rnpc3	100	61.719	Hippocampus_comes
ENSPMGG00000011742	rnpc3	97	59.879	ENSIPUG00000002916	rnpc3	97	59.476	Ictalurus_punctatus
ENSPMGG00000011742	rnpc3	95	50.816	ENSSTOG00000025020	RNPC3	93	51.020	Ictidomys_tridecemlineatus
ENSPMGG00000011742	rnpc3	95	51.429	ENSJJAG00000010203	Rnpc3	94	50.607	Jaculus_jaculus
ENSPMGG00000011742	rnpc3	97	64.286	ENSKMAG00000017358	rnpc3	97	65.102	Kryptolebias_marmoratus
ENSPMGG00000011742	rnpc3	99	64.567	ENSLBEG00000024901	rnpc3	97	65.354	Labrus_bergylta
ENSPMGG00000011742	rnpc3	95	52.738	ENSLACG00000005720	RNPC3	88	53.550	Latimeria_chalumnae
ENSPMGG00000011742	rnpc3	95	57.851	ENSLOCG00000007986	rnpc3	99	56.548	Lepisosteus_oculatus
ENSPMGG00000011742	rnpc3	95	52.439	ENSLAFG00000032342	RNPC3	93	52.033	Loxodonta_africana
ENSPMGG00000011742	rnpc3	95	52.227	ENSMFAG00000002004	RNPC3	93	51.717	Macaca_fascicularis
ENSPMGG00000011742	rnpc3	95	39.501	ENSMFAG00000002917	-	93	39.666	Macaca_fascicularis
ENSPMGG00000011742	rnpc3	95	52.227	ENSMMUG00000018039	RNPC3	93	51.515	Macaca_mulatta
ENSPMGG00000011742	rnpc3	78	50.476	ENSMMUG00000002098	-	83	49.048	Macaca_mulatta
ENSPMGG00000011742	rnpc3	95	48.988	ENSMNEG00000033950	RNPC3	93	48.485	Macaca_nemestrina
ENSPMGG00000011742	rnpc3	82	42.553	ENSMNEG00000029209	-	92	42.553	Macaca_nemestrina
ENSPMGG00000011742	rnpc3	73	47.671	ENSMLEG00000034644	-	75	46.703	Mandrillus_leucophaeus
ENSPMGG00000011742	rnpc3	95	52.227	ENSMLEG00000033628	RNPC3	93	51.717	Mandrillus_leucophaeus
ENSPMGG00000011742	rnpc3	98	59.325	ENSMAMG00000007496	rnpc3	97	56.117	Mastacembelus_armatus
ENSPMGG00000011742	rnpc3	98	64.833	ENSMZEG00005020233	rnpc3	99	65.107	Maylandia_zebra
ENSPMGG00000011742	rnpc3	89	50.968	ENSMGAG00000006381	RNPC3	99	51.717	Meleagris_gallopavo
ENSPMGG00000011742	rnpc3	95	51.230	ENSMAUG00000001358	Rnpc3	93	51.639	Mesocricetus_auratus
ENSPMGG00000011742	rnpc3	97	50.895	ENSMICG00000029591	RNPC3	95	50.693	Microcebus_murinus
ENSPMGG00000011742	rnpc3	95	51.125	ENSMOCG00000013423	Rnpc3	93	51.429	Microtus_ochrogaster
ENSPMGG00000011742	rnpc3	100	61.078	ENSMMOG00000005309	rnpc3	99	60.878	Mola_mola
ENSPMGG00000011742	rnpc3	98	51.683	ENSMODG00000002946	RNPC3	96	51.089	Monodelphis_domestica
ENSPMGG00000011742	rnpc3	100	60.078	ENSMALG00000015471	rnpc3	100	59.646	Monopterus_albus
ENSPMGG00000011742	rnpc3	95	51.646	MGP_CAROLIEiJ_G0025555	Rnpc3	95	52.156	Mus_caroli
ENSPMGG00000011742	rnpc3	95	51.329	ENSMUSG00000027981	Rnpc3	98	50.756	Mus_musculus
ENSPMGG00000011742	rnpc3	95	50.920	MGP_PahariEiJ_G0027001	Rnpc3	94	51.534	Mus_pahari
ENSPMGG00000011742	rnpc3	95	50.505	MGP_SPRETEiJ_G0026505	Rnpc3	94	51.943	Mus_spretus
ENSPMGG00000011742	rnpc3	95	52.675	ENSMPUG00000007349	RNPC3	93	52.156	Mustela_putorius_furo
ENSPMGG00000011742	rnpc3	97	51.200	ENSMLUG00000028743	RNPC3	95	52.295	Myotis_lucifugus
ENSPMGG00000011742	rnpc3	95	51.224	ENSNGAG00000010939	Rnpc3	93	50.612	Nannospalax_galili
ENSPMGG00000011742	rnpc3	98	65.606	ENSNBRG00000012196	rnpc3	96	65.878	Neolamprologus_brichardi
ENSPMGG00000011742	rnpc3	95	52.535	ENSNLEG00000012013	RNPC3	93	51.822	Nomascus_leucogenys
ENSPMGG00000011742	rnpc3	95	51.738	ENSODEG00000007612	RNPC3	93	50.920	Octodon_degus
ENSPMGG00000011742	rnpc3	98	66.139	ENSONIG00000004770	rnpc3	99	66.802	Oreochromis_niloticus
ENSPMGG00000011742	rnpc3	92	51.059	ENSOANG00000008220	RNPC3	100	50.636	Ornithorhynchus_anatinus
ENSPMGG00000011742	rnpc3	95	52.041	ENSOCUG00000004016	RNPC3	93	51.324	Oryctolagus_cuniculus
ENSPMGG00000011742	rnpc3	99	62.648	ENSORLG00000005694	rnpc3	99	64.229	Oryzias_latipes
ENSPMGG00000011742	rnpc3	99	63.241	ENSORLG00020005513	rnpc3	99	64.822	Oryzias_latipes_hni
ENSPMGG00000011742	rnpc3	99	63.241	ENSORLG00015002179	rnpc3	99	64.625	Oryzias_latipes_hsok
ENSPMGG00000011742	rnpc3	98	63.783	ENSOMEG00000017737	rnpc3	97	65.392	Oryzias_melastigma
ENSPMGG00000011742	rnpc3	95	52.130	ENSOGAG00000026182	RNPC3	93	52.024	Otolemur_garnettii
ENSPMGG00000011742	rnpc3	95	52.772	ENSOARG00000018719	RNPC3	93	51.639	Ovis_aries
ENSPMGG00000011742	rnpc3	95	52.121	ENSPPAG00000037459	RNPC3	93	51.411	Pan_paniscus
ENSPMGG00000011742	rnpc3	96	44.489	ENSPPAG00000030278	-	95	43.878	Pan_paniscus
ENSPMGG00000011742	rnpc3	96	52.227	ENSPPRG00000020246	RNPC3	94	51.822	Panthera_pardus
ENSPMGG00000011742	rnpc3	96	52.227	ENSPTIG00000009887	RNPC3	95	51.822	Panthera_tigris_altaica
ENSPMGG00000011742	rnpc3	95	52.632	ENSPTRG00000033902	RNPC3	93	51.919	Pan_troglodytes
ENSPMGG00000011742	rnpc3	95	43.648	ENSPTRG00000044227	-	95	43.033	Pan_troglodytes
ENSPMGG00000011742	rnpc3	95	42.505	ENSPANG00000029957	-	94	41.250	Papio_anubis
ENSPMGG00000011742	rnpc3	95	52.333	ENSPANG00000012137	RNPC3	93	51.822	Papio_anubis
ENSPMGG00000011742	rnpc3	98	60.000	ENSPKIG00000008828	rnpc3	97	59.759	Paramormyrops_kingsleyae
ENSPMGG00000011742	rnpc3	65	48.810	ENSPSIG00000007396	RNPC3	100	47.917	Pelodiscus_sinensis
ENSPMGG00000011742	rnpc3	88	50.442	ENSPEMG00000020112	Rnpc3	98	50.776	Peromyscus_maniculatus_bairdii
ENSPMGG00000011742	rnpc3	98	52.079	ENSPCIG00000004415	-	96	51.287	Phascolarctos_cinereus
ENSPMGG00000011742	rnpc3	99	63.689	ENSPFOG00000009895	rnpc3	99	64.008	Poecilia_formosa
ENSPMGG00000011742	rnpc3	99	64.327	ENSPLAG00000012023	rnpc3	99	64.522	Poecilia_latipinna
ENSPMGG00000011742	rnpc3	99	63.922	ENSPMEG00000003663	rnpc3	99	64.202	Poecilia_mexicana
ENSPMGG00000011742	rnpc3	99	64.833	ENSPREG00000010206	rnpc3	99	65.029	Poecilia_reticulata
ENSPMGG00000011742	rnpc3	80	48.219	ENSPPYG00000001102	RNPC3	93	47.393	Pongo_abelii
ENSPMGG00000011742	rnpc3	98	65.606	ENSPNYG00000020603	rnpc3	99	65.680	Pundamilia_nyererei
ENSPMGG00000011742	rnpc3	95	52.138	ENSRNOG00000017310	Rnpc3	93	51.527	Rattus_norvegicus
ENSPMGG00000011742	rnpc3	95	47.475	ENSRBIG00000043897	RNPC3	93	47.984	Rhinopithecus_bieti
ENSPMGG00000011742	rnpc3	95	52.429	ENSRROG00000032334	RNPC3	93	51.717	Rhinopithecus_roxellana
ENSPMGG00000011742	rnpc3	95	52.236	ENSSBOG00000024473	RNPC3	93	51.521	Saimiri_boliviensis_boliviensis
ENSPMGG00000011742	rnpc3	98	51.292	ENSSHAG00000011859	RNPC3	96	50.696	Sarcophilus_harrisii
ENSPMGG00000011742	rnpc3	97	61.460	ENSSFOG00015013055	rnpc3	98	61.866	Scleropages_formosus
ENSPMGG00000011742	rnpc3	100	61.748	ENSSMAG00000020346	rnpc3	99	61.165	Scophthalmus_maximus
ENSPMGG00000011742	rnpc3	100	65.302	ENSSDUG00000006600	rnpc3	99	65.302	Seriola_dumerili
ENSPMGG00000011742	rnpc3	100	65.497	ENSSLDG00000007979	rnpc3	99	65.497	Seriola_lalandi_dorsalis
ENSPMGG00000011742	rnpc3	95	51.822	ENSSPUG00000008539	-	92	51.619	Sphenodon_punctatus
ENSPMGG00000011742	rnpc3	95	48.566	ENSSPUG00000003872	-	91	47.705	Sphenodon_punctatus
ENSPMGG00000011742	rnpc3	100	67.396	ENSSPAG00000005633	rnpc3	99	66.799	Stegastes_partitus
ENSPMGG00000011742	rnpc3	95	53.608	ENSSSCG00000037254	RNPC3	93	52.371	Sus_scrofa
ENSPMGG00000011742	rnpc3	89	52.826	ENSTGUG00000004795	-	100	52.174	Taeniopygia_guttata
ENSPMGG00000011742	rnpc3	99	63.529	ENSTNIG00000018963	rnpc3	99	63.529	Tetraodon_nigroviridis
ENSPMGG00000011742	rnpc3	95	52.567	ENSUMAG00000007775	RNPC3	95	52.049	Ursus_maritimus
ENSPMGG00000011742	rnpc3	95	52.361	ENSVVUG00000000331	RNPC3	93	51.844	Vulpes_vulpes
ENSPMGG00000011742	rnpc3	99	42.992	ENSXETG00000025027	rnpc3	97	43.849	Xenopus_tropicalis
ENSPMGG00000011742	rnpc3	98	63.690	ENSXCOG00000005013	rnpc3	97	63.511	Xiphophorus_couchianus
ENSPMGG00000011742	rnpc3	98	64.930	ENSXMAG00000006495	rnpc3	97	65.331	Xiphophorus_maculatus