EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000012037 (Gene tree)
Gene ID: -
Gene Symbol: cnot3a
Alias: -
Full Name: CCR4-NOT transcription complex%2C subunit 3a
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 6679 bases
Position: chrKN467564.1:259215-265893
Accession: ZDB-GENE-040927-6
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000014698	Not3	PF04065.15	3.5e-12	1	1
ENSPMGP00000014698	NOT2_3_5	PF04153.18	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000015670	-	1503	-	ENSPMGP00000014698	500 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000012037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000012037's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000012037	cnot3a	59	100.000	ENSACIG00000006635	cnot3a	51	94.737	Amphilophus_citrinellus
ENSPMGG00000012037	cnot3a	80	76.289	ENSAPEG00000002640	cnot3b	55	67.089	Amphiprion_percula
ENSPMGG00000012037	cnot3a	86	95.918	ENSMMOG00000016446	cnot3a	50	95.918	Mola_mola
ENSPMGG00000012037	cnot3a	89	90.598	ENSPREG00000007592	cnot3a	52	90.598	Poecilia_reticulata
ENSPMGG00000012037	cnot3a	59	100.000	ENSSDUG00000008181	cnot3a	50	100.000	Seriola_dumerili
ENSPMGG00000012037	cnot3a	85	92.857	ENSXCOG00000019460	cnot3a	54	84.375	Xiphophorus_couchianus