EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000012082 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1l
Alias: -
Full Name: RNA binding fox-1 homolog 1%2C like
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 13150 bases
Position: chrKN467564.1:328784-341933
Accession: ZDB-GENE-040923-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000014746	Fox-1_C	PF12414.8	8.4e-34	1	1
ENSPMGP00000014746	RRM_1	PF00076.22	7.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000015721	-	1080	-	ENSPMGP00000014746	359 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000012082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000012082's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000012082	rbfox1l	97	82.703	ENSAPOG00000016304	rbfox1l	98	83.243	Acanthochromis_polyacanthus
ENSPMGG00000012082	rbfox1l	100	75.462	ENSACIG00000006441	rbfox1l	100	74.406	Amphilophus_citrinellus
ENSPMGG00000012082	rbfox1l	88	77.083	ENSAOCG00000020938	rbfox1l	99	77.976	Amphiprion_ocellaris
ENSPMGG00000012082	rbfox1l	100	81.937	ENSAPEG00000008232	rbfox1l	100	84.031	Amphiprion_percula
ENSPMGG00000012082	rbfox1l	100	78.947	ENSATEG00000022649	rbfox1l	100	78.421	Anabas_testudineus
ENSPMGG00000012082	rbfox1l	63	68.952	ENSACAG00000011931	-	89	69.959	Anolis_carolinensis
ENSPMGG00000012082	rbfox1l	100	79.688	ENSACLG00000021394	rbfox1l	100	80.208	Astatotilapia_calliptera
ENSPMGG00000012082	rbfox1l	100	80.105	ENSAMXG00000010470	rbfox1l	100	78.329	Astyanax_mexicanus
ENSPMGG00000012082	rbfox1l	100	53.247	ENSCPBG00000010944	-	100	55.784	Chrysemys_picta_bellii
ENSPMGG00000012082	rbfox1l	100	80.315	ENSCSEG00000018898	rbfox1l	100	80.840	Cynoglossus_semilaevis
ENSPMGG00000012082	rbfox1l	100	81.201	ENSCVAG00000007986	rbfox1l	100	81.937	Cyprinodon_variegatus
ENSPMGG00000012082	rbfox1l	100	78.272	ENSDARG00000021184	rbfox1l	100	76.963	Danio_rerio
ENSPMGG00000012082	rbfox1l	100	74.526	ENSELUG00000015077	rbfox1l	100	78.049	Esox_lucius
ENSPMGG00000012082	rbfox1l	100	67.769	ENSFHEG00000016557	rbfox1l	90	95.122	Fundulus_heteroclitus
ENSPMGG00000012082	rbfox1l	100	77.023	ENSGMOG00000005040	rbfox1l	100	75.196	Gadus_morhua
ENSPMGG00000012082	rbfox1l	92	79.437	ENSGAFG00000013211	rbfox1l	97	80.168	Gambusia_affinis
ENSPMGG00000012082	rbfox1l	100	79.427	ENSGACG00000010757	rbfox1l	100	80.208	Gasterosteus_aculeatus
ENSPMGG00000012082	rbfox1l	70	63.433	ENSGAGG00000012440	-	84	68.333	Gopherus_agassizii
ENSPMGG00000012082	rbfox1l	100	79.688	ENSHBUG00000013406	rbfox1l	100	80.208	Haplochromis_burtoni
ENSPMGG00000012082	rbfox1l	100	79.221	ENSHCOG00000020771	rbfox1l	100	79.740	Hippocampus_comes
ENSPMGG00000012082	rbfox1l	99	76.127	ENSIPUG00000000065	rbfox1l	99	75.637	Ictalurus_punctatus
ENSPMGG00000012082	rbfox1l	100	78.756	ENSKMAG00000005146	rbfox1l	100	80.829	Kryptolebias_marmoratus
ENSPMGG00000012082	rbfox1l	100	80.990	ENSLBEG00000017089	rbfox1l	100	83.333	Labrus_bergylta
ENSPMGG00000012082	rbfox1l	100	79.167	ENSMAMG00000019480	rbfox1l	100	81.771	Mastacembelus_armatus
ENSPMGG00000012082	rbfox1l	100	79.688	ENSMZEG00005016374	rbfox1l	100	80.208	Maylandia_zebra
ENSPMGG00000012082	rbfox1l	100	80.263	ENSMMOG00000016530	rbfox1l	100	81.053	Mola_mola
ENSPMGG00000012082	rbfox1l	100	78.684	ENSMALG00000009384	rbfox1l	100	78.158	Monopterus_albus
ENSPMGG00000012082	rbfox1l	100	80.315	ENSNBRG00000003346	rbfox1l	100	80.840	Neolamprologus_brichardi
ENSPMGG00000012082	rbfox1l	100	80.208	ENSONIG00000012754	rbfox1l	100	80.729	Oreochromis_niloticus
ENSPMGG00000012082	rbfox1l	100	79.581	ENSORLG00000011269	rbfox1l	100	79.581	Oryzias_latipes
ENSPMGG00000012082	rbfox1l	100	80.105	ENSORLG00020000162	rbfox1l	100	81.937	Oryzias_latipes_hni
ENSPMGG00000012082	rbfox1l	100	80.105	ENSORLG00015013464	rbfox1l	100	81.937	Oryzias_latipes_hsok
ENSPMGG00000012082	rbfox1l	100	80.105	ENSOMEG00000010584	rbfox1l	100	82.984	Oryzias_melastigma
ENSPMGG00000012082	rbfox1l	100	78.947	ENSPKIG00000012029	rbfox1l	100	80.000	Paramormyrops_kingsleyae
ENSPMGG00000012082	rbfox1l	100	81.250	ENSPFOG00000009338	rbfox1l	100	81.250	Poecilia_formosa
ENSPMGG00000012082	rbfox1l	85	73.620	ENSPLAG00000012816	rbfox1l	99	72.086	Poecilia_latipinna
ENSPMGG00000012082	rbfox1l	100	76.823	ENSPMEG00000017597	rbfox1l	100	76.042	Poecilia_mexicana
ENSPMGG00000012082	rbfox1l	100	76.302	ENSPREG00000007940	rbfox1l	100	76.042	Poecilia_reticulata
ENSPMGG00000012082	rbfox1l	100	79.688	ENSPNYG00000002098	rbfox1l	100	80.208	Pundamilia_nyererei
ENSPMGG00000012082	rbfox1l	100	81.201	ENSPNAG00000001620	rbfox1l	100	79.634	Pygocentrus_nattereri
ENSPMGG00000012082	rbfox1l	100	77.165	ENSSFOG00015000675	rbfox1l	100	77.953	Scleropages_formosus
ENSPMGG00000012082	rbfox1l	100	79.948	ENSSMAG00000013090	rbfox1l	100	79.948	Scophthalmus_maximus
ENSPMGG00000012082	rbfox1l	100	76.623	ENSSDUG00000008705	rbfox1l	100	78.182	Seriola_dumerili
ENSPMGG00000012082	rbfox1l	100	76.227	ENSSLDG00000022256	rbfox1l	100	77.778	Seriola_lalandi_dorsalis
ENSPMGG00000012082	rbfox1l	100	81.937	ENSSPAG00000016620	rbfox1l	100	84.031	Stegastes_partitus
ENSPMGG00000012082	rbfox1l	96	76.712	ENSTRUG00000015905	rbfox1l	100	76.164	Takifugu_rubripes
ENSPMGG00000012082	rbfox1l	64	75.564	ENSTNIG00000008088	rbfox1l	97	77.606	Tetraodon_nigroviridis
ENSPMGG00000012082	rbfox1l	100	80.208	ENSXMAG00000023471	rbfox1l	100	81.510	Xiphophorus_maculatus