EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPMGG00000012103 (Gene tree)
Gene ID
-
Gene Symbol
lsm3
Alias
-
Full Name
LSM3 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Periophthalmus_magnuspinnatus
Status
putative
Strand
Minus strand
Length
3886 bases
Position
chrKN462134.1:503939-507824
Accession
ZDB-GENE-161207-2
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMGP00000014764LSMPF01423.222.9e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMGT00000015742-300-ENSPMGP0000001476499 (aa)--
Gene Model
Click here to download ENSPMGG00000012103's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000012103's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMGG00000012103lsm39694.737ENSG00000170860LSM39394.737Homo_sapiens
ENSPMGG00000012103lsm39697.895ENSAPOG00000018947lsm39595.876Acanthochromis_polyacanthus
ENSPMGG00000012103lsm39694.737ENSAMEG00000009405LSM39394.737Ailuropoda_melanoleuca
ENSPMGG00000012103lsm39894.845ENSACIG00000004574lsm36894.845Amphilophus_citrinellus
ENSPMGG00000012103lsm39895.876ENSAOCG00000007658lsm39595.876Amphiprion_ocellaris
ENSPMGG00000012103lsm39895.876ENSAPEG00000018621lsm39595.876Amphiprion_percula
ENSPMGG00000012103lsm39895.876ENSATEG00000005153lsm39595.876Anabas_testudineus
ENSPMGG00000012103lsm39694.737ENSAPLG00000014499LSM310094.737Anas_platyrhynchos
ENSPMGG00000012103lsm39694.737ENSACAG00000013503LSM39394.737Anolis_carolinensis
ENSPMGG00000012103lsm39694.737ENSANAG00000034627LSM39394.737Aotus_nancymaae
ENSPMGG00000012103lsm39691.579ENSANAG00000002903-9391.579Aotus_nancymaae
ENSPMGG00000012103lsm39895.876ENSACLG00000001726-9495.876Astatotilapia_calliptera
ENSPMGG00000012103lsm39893.814ENSAMXG00000041214lsm39593.814Astyanax_mexicanus
ENSPMGG00000012103lsm39694.737ENSBTAG00000007363LSM39994.737Bos_taurus
ENSPMGG00000012103lsm39174.444WBGene00003077lsm-38874.444Caenorhabditis_elegans
ENSPMGG00000012103lsm39692.632ENSCAFG00000001760LSM39392.632Canis_familiaris
ENSPMGG00000012103lsm39692.632ENSCAFG00020017266-9392.632Canis_lupus_dingo
ENSPMGG00000012103lsm39692.632ENSCAFG00020021584-9392.632Canis_lupus_dingo
ENSPMGG00000012103lsm39686.316ENSCAFG00020016680-9386.316Canis_lupus_dingo
ENSPMGG00000012103lsm39685.000ENSCAFG00020020950-9385.000Canis_lupus_dingo
ENSPMGG00000012103lsm39691.579ENSCAFG00020026452-9391.579Canis_lupus_dingo
ENSPMGG00000012103lsm39694.737ENSCHIG00000024650LSM39394.737Capra_hircus
ENSPMGG00000012103lsm39772.917ENSTSYG00000028528-9372.917Carlito_syrichta
ENSPMGG00000012103lsm39892.784ENSTSYG00000005204-9592.784Carlito_syrichta
ENSPMGG00000012103lsm39694.737ENSCAPG00000015760LSM39994.737Cavia_aperea
ENSPMGG00000012103lsm39694.737ENSCPOG00000034071LSM39394.737Cavia_porcellus
ENSPMGG00000012103lsm39694.737ENSCCAG00000036499-9394.737Cebus_capucinus
ENSPMGG00000012103lsm39694.737ENSCCAG00000019503-9394.737Cebus_capucinus
ENSPMGG00000012103lsm39674.737ENSCCAG00000032763-9374.737Cebus_capucinus
ENSPMGG00000012103lsm39694.737ENSCATG00000039421LSM39394.737Cercocebus_atys
ENSPMGG00000012103lsm39576.596ENSCATG00000031630-9176.596Cercocebus_atys
ENSPMGG00000012103lsm39694.737ENSCLAG00000015997LSM39394.737Chinchilla_lanigera
ENSPMGG00000012103lsm39689.474ENSCSAG00000019525-9389.474Chlorocebus_sabaeus
ENSPMGG00000012103lsm39694.737ENSCPBG00000014531LSM39394.737Chrysemys_picta_bellii
ENSPMGG00000012103lsm39881.633ENSCSAVG00000009542-9481.633Ciona_savignyi
ENSPMGG00000012103lsm39691.579ENSCANG00000018782-9391.579Colobus_angolensis_palliatus
ENSPMGG00000012103lsm39694.737ENSCANG00000033944-9394.737Colobus_angolensis_palliatus
ENSPMGG00000012103lsm39691.579ENSCANG00000038037-9391.579Colobus_angolensis_palliatus
ENSPMGG00000012103lsm39694.737ENSCGRG00001017598Lsm39694.737Cricetulus_griseus_chok1gshd
ENSPMGG00000012103lsm39681.053ENSCGRG00001011396-9581.053Cricetulus_griseus_chok1gshd
ENSPMGG00000012103lsm39773.196ENSCGRG00001008639-9873.196Cricetulus_griseus_chok1gshd
ENSPMGG00000012103lsm39681.053ENSCGRG00000012129-10081.053Cricetulus_griseus_crigri
ENSPMGG00000012103lsm39694.737ENSCGRG00000016159Lsm39694.737Cricetulus_griseus_crigri
ENSPMGG00000012103lsm39895.876ENSCSEG00000015071lsm37395.876Cynoglossus_semilaevis
ENSPMGG00000012103lsm39597.872ENSCVAG00000006933lsm39297.872Cyprinodon_variegatus
ENSPMGG00000012103lsm39992.857ENSDARG00000089663lsm39692.857Danio_rerio
ENSPMGG00000012103lsm39694.737ENSDNOG00000030808LSM39394.737Dasypus_novemcinctus
ENSPMGG00000012103lsm310072.549ENSDORG00000024490-10072.549Dipodomys_ordii
ENSPMGG00000012103lsm39992.857ENSDORG00000006894-9394.737Dipodomys_ordii
ENSPMGG00000012103lsm39083.146FBgn0051184LSm38683.146Drosophila_melanogaster
ENSPMGG00000012103lsm39694.737ENSETEG00000016207LSM39394.737Echinops_telfairi
ENSPMGG00000012103lsm39691.579ENSEBUG00000004943lsm39391.579Eptatretus_burgeri
ENSPMGG00000012103lsm39694.737ENSEASG00005015443LSM39394.737Equus_asinus_asinus
ENSPMGG00000012103lsm39694.737ENSECAG00000007803LSM39394.737Equus_caballus
ENSPMGG00000012103lsm39893.814ENSELUG00000018922lsm39593.814Esox_lucius
ENSPMGG00000012103lsm39694.737ENSFCAG00000038453LSM39394.737Felis_catus
ENSPMGG00000012103lsm39671.579ENSFCAG00000044344-9371.579Felis_catus
ENSPMGG00000012103lsm39694.737ENSFALG00000012644LSM39394.737Ficedula_albicollis
ENSPMGG00000012103lsm39694.737ENSFDAG00000011470LSM39394.737Fukomys_damarensis
ENSPMGG00000012103lsm39895.876ENSFHEG00000000876lsm39595.876Fundulus_heteroclitus
ENSPMGG00000012103lsm39695.789ENSGMOG00000011024lsm310095.789Gadus_morhua
ENSPMGG00000012103lsm39895.876ENSGAFG00000013965lsm39595.876Gambusia_affinis
ENSPMGG00000012103lsm39895.876ENSGACG00000003488lsm39595.876Gasterosteus_aculeatus
ENSPMGG00000012103lsm39694.737ENSGAGG00000025707LSM39394.737Gopherus_agassizii
ENSPMGG00000012103lsm39694.737ENSGGOG00000010006LSM39394.737Gorilla_gorilla
ENSPMGG00000012103lsm39895.876ENSHBUG00000022399lsm39595.876Haplochromis_burtoni
ENSPMGG00000012103lsm39694.737ENSHGLG00000000651LSM39394.737Heterocephalus_glaber_female
ENSPMGG00000012103lsm39673.684ENSHGLG00000015564-9273.684Heterocephalus_glaber_female
ENSPMGG00000012103lsm39694.737ENSHGLG00100011343LSM39394.737Heterocephalus_glaber_male
ENSPMGG00000012103lsm39673.684ENSHGLG00100010658-9273.684Heterocephalus_glaber_male
ENSPMGG00000012103lsm39894.845ENSHCOG00000013481lsm39594.845Hippocampus_comes
ENSPMGG00000012103lsm39894.845ENSIPUG00000009207lsm39594.845Ictalurus_punctatus
ENSPMGG00000012103lsm39694.737ENSSTOG00000006842LSM39394.737Ictidomys_tridecemlineatus
ENSPMGG00000012103lsm310071.717ENSJJAG00000018311-9771.717Jaculus_jaculus
ENSPMGG00000012103lsm39694.737ENSJJAG00000017351Lsm39394.737Jaculus_jaculus
ENSPMGG00000012103lsm39686.316ENSJJAG00000012797-9386.316Jaculus_jaculus
ENSPMGG00000012103lsm39894.845ENSKMAG00000015182lsm39594.845Kryptolebias_marmoratus
ENSPMGG00000012103lsm39895.876ENSLBEG00000021292lsm39995.876Labrus_bergylta
ENSPMGG00000012103lsm39695.789ENSLOCG00000013560lsm39395.789Lepisosteus_oculatus
ENSPMGG00000012103lsm39893.814ENSLAFG00000023308LSM39493.814Loxodonta_africana
ENSPMGG00000012103lsm39694.737ENSMFAG00000003185LSM39394.737Macaca_fascicularis
ENSPMGG00000012103lsm39694.737ENSMMUG00000023126LSM39394.737Macaca_mulatta
ENSPMGG00000012103lsm39577.660ENSMMUG00000002294-9077.660Macaca_mulatta
ENSPMGG00000012103lsm39475.269ENSMMUG00000043596-9075.269Macaca_mulatta
ENSPMGG00000012103lsm39577.660ENSMNEG00000037686-9177.660Macaca_nemestrina
ENSPMGG00000012103lsm39694.737ENSMNEG00000043632LSM39394.737Macaca_nemestrina
ENSPMGG00000012103lsm39694.737ENSMLEG00000036162LSM39394.737Mandrillus_leucophaeus
ENSPMGG00000012103lsm39895.876ENSMAMG00000012807lsm39595.876Mastacembelus_armatus
ENSPMGG00000012103lsm39895.876ENSMZEG00005016682lsm37095.876Maylandia_zebra
ENSPMGG00000012103lsm39694.737ENSMGAG00000007776LSM39994.737Meleagris_gallopavo
ENSPMGG00000012103lsm39681.053ENSMICG00000027821-9381.053Microcebus_murinus
ENSPMGG00000012103lsm39694.737ENSMICG00000032361-9394.737Microcebus_murinus
ENSPMGG00000012103lsm39694.737ENSMOCG00000014269Lsm39394.737Microtus_ochrogaster
ENSPMGG00000012103lsm39894.845ENSMMOG00000020715lsm39594.845Mola_mola
ENSPMGG00000012103lsm310091.919ENSMODG00000007275LSM310091.919Monodelphis_domestica
ENSPMGG00000012103lsm39895.876ENSMALG00000006485lsm39595.876Monopterus_albus
ENSPMGG00000012103lsm39694.737ENSMUSG00000034192Lsm39394.737Mus_musculus
ENSPMGG00000012103lsm39694.737MGP_PahariEiJ_G0022402Lsm39394.737Mus_pahari
ENSPMGG00000012103lsm39694.737MGP_SPRETEiJ_G0029681Lsm39394.737Mus_spretus
ENSPMGG00000012103lsm37985.897ENSMPUG00000017256-9285.897Mustela_putorius_furo
ENSPMGG00000012103lsm39584.043ENSMPUG00000019120-9184.043Mustela_putorius_furo
ENSPMGG00000012103lsm39694.737ENSMLUG00000010677LSM39394.737Myotis_lucifugus
ENSPMGG00000012103lsm39887.629ENSMLUG00000024700-9587.629Myotis_lucifugus
ENSPMGG00000012103lsm39575.532ENSNGAG00000010207-9275.532Nannospalax_galili
ENSPMGG00000012103lsm39670.526ENSNGAG00000013716-9270.526Nannospalax_galili
ENSPMGG00000012103lsm39694.737ENSNGAG00000022450Lsm39394.737Nannospalax_galili
ENSPMGG00000012103lsm39895.876ENSNBRG00000014318lsm39595.876Neolamprologus_brichardi
ENSPMGG00000012103lsm39694.737ENSNLEG00000005079LSM39394.737Nomascus_leucogenys
ENSPMGG00000012103lsm39685.263ENSNLEG00000030229-9385.263Nomascus_leucogenys
ENSPMGG00000012103lsm39692.632ENSODEG00000019158-9392.632Octodon_degus
ENSPMGG00000012103lsm39688.421ENSODEG00000019403-9388.421Octodon_degus
ENSPMGG00000012103lsm39694.737ENSODEG00000001726LSM39394.737Octodon_degus
ENSPMGG00000012103lsm39693.684ENSODEG00000019740-9393.684Octodon_degus
ENSPMGG00000012103lsm39895.876ENSONIG00000000370lsm39595.876Oreochromis_niloticus
ENSPMGG00000012103lsm39895.876ENSONIG00000021369-9595.876Oreochromis_niloticus
ENSPMGG00000012103lsm39694.737ENSOANG00000012273LSM39394.737Ornithorhynchus_anatinus
ENSPMGG00000012103lsm39694.737ENSOCUG00000027653-9394.737Oryctolagus_cuniculus
ENSPMGG00000012103lsm39494.624ENSOCUG00000011088-9194.624Oryctolagus_cuniculus
ENSPMGG00000012103lsm39993.878ENSORLG00000025900lsm39693.878Oryzias_latipes
ENSPMGG00000012103lsm39993.878ENSORLG00020007125lsm39693.878Oryzias_latipes_hni
ENSPMGG00000012103lsm39993.878ENSORLG00015002944lsm39693.878Oryzias_latipes_hsok
ENSPMGG00000012103lsm39993.878ENSOMEG00000001915lsm39693.878Oryzias_melastigma
ENSPMGG00000012103lsm39694.737ENSOGAG00000007659-9394.737Otolemur_garnettii
ENSPMGG00000012103lsm39685.263ENSOGAG00000033051-9385.263Otolemur_garnettii
ENSPMGG00000012103lsm39693.684ENSOGAG00000028858-9793.684Otolemur_garnettii
ENSPMGG00000012103lsm39893.814ENSOARG00000000600LSM39493.814Ovis_aries
ENSPMGG00000012103lsm39694.737ENSPPAG00000034074LSM39394.737Pan_paniscus
ENSPMGG00000012103lsm39693.684ENSPPRG00000020953-9393.684Panthera_pardus
ENSPMGG00000012103lsm39688.421ENSPPRG00000010610-8388.421Panthera_pardus
ENSPMGG00000012103lsm39694.737ENSPPRG00000012912-9394.737Panthera_pardus
ENSPMGG00000012103lsm39694.737ENSPTIG00000013072-9394.737Panthera_tigris_altaica
ENSPMGG00000012103lsm39694.737ENSPTIG00000003463-9394.737Panthera_tigris_altaica
ENSPMGG00000012103lsm39694.737ENSPTRG00000014650LSM39394.737Pan_troglodytes
ENSPMGG00000012103lsm39475.269ENSPANG00000032192-9075.269Papio_anubis
ENSPMGG00000012103lsm39694.737ENSPANG00000009378LSM39394.737Papio_anubis
ENSPMGG00000012103lsm39892.784ENSPKIG00000008037lsm38792.784Paramormyrops_kingsleyae
ENSPMGG00000012103lsm39694.737ENSPSIG00000015720LSM39394.737Pelodiscus_sinensis
ENSPMGG00000012103lsm39694.737ENSPEMG00000015797Lsm39394.737Peromyscus_maniculatus_bairdii
ENSPMGG00000012103lsm39677.895ENSPEMG00000020213-9277.895Peromyscus_maniculatus_bairdii
ENSPMGG00000012103lsm39895.876ENSPFOG00000008372lsm39595.876Poecilia_formosa
ENSPMGG00000012103lsm39895.876ENSPLAG00000000563lsm39595.876Poecilia_latipinna
ENSPMGG00000012103lsm39697.895ENSPMEG00000022052lsm39595.876Poecilia_mexicana
ENSPMGG00000012103lsm39895.876ENSPREG00000022485lsm39595.876Poecilia_reticulata
ENSPMGG00000012103lsm39694.737ENSPPYG00000013402LSM39394.737Pongo_abelii
ENSPMGG00000012103lsm39694.737ENSPCAG00000017077LSM39394.737Procavia_capensis
ENSPMGG00000012103lsm39075.281ENSPCOG00000014435-8975.281Propithecus_coquereli
ENSPMGG00000012103lsm39694.737ENSPCOG00000016217-9394.737Propithecus_coquereli
ENSPMGG00000012103lsm39694.737ENSPVAG00000016795LSM39394.737Pteropus_vampyrus
ENSPMGG00000012103lsm39895.876ENSPNYG00000009552lsm37095.876Pundamilia_nyererei
ENSPMGG00000012103lsm39893.814ENSPNAG00000023467lsm39593.814Pygocentrus_nattereri
ENSPMGG00000012103lsm39694.737ENSRNOG00000008733Lsm39394.737Rattus_norvegicus
ENSPMGG00000012103lsm39678.947ENSRBIG00000043783-9278.947Rhinopithecus_bieti
ENSPMGG00000012103lsm39694.737ENSRBIG00000034399LSM39394.737Rhinopithecus_bieti
ENSPMGG00000012103lsm39478.495ENSRROG00000044056-9078.495Rhinopithecus_roxellana
ENSPMGG00000012103lsm39694.737ENSRROG00000033276-9394.737Rhinopithecus_roxellana
ENSPMGG00000012103lsm39680.000ENSRROG00000039868-9280.000Rhinopithecus_roxellana
ENSPMGG00000012103lsm39683.158ENSRROG00000044047-9383.158Rhinopithecus_roxellana
ENSPMGG00000012103lsm39694.737ENSSBOG00000024310LSM39394.737Saimiri_boliviensis_boliviensis
ENSPMGG00000012103lsm39893.814ENSSFOG00015007071lsm39593.814Scleropages_formosus
ENSPMGG00000012103lsm39895.876ENSSMAG00000001818lsm39595.876Scophthalmus_maximus
ENSPMGG00000012103lsm39697.895ENSSDUG00000006040lsm39595.876Seriola_dumerili
ENSPMGG00000012103lsm39895.876ENSSLDG00000006399lsm39595.876Seriola_lalandi_dorsalis
ENSPMGG00000012103lsm35994.828ENSSARG00000005275-10094.828Sorex_araneus
ENSPMGG00000012103lsm39685.263ENSSPUG00000005394LSM39385.263Sphenodon_punctatus
ENSPMGG00000012103lsm39694.737ENSSPUG00000017047-9994.737Sphenodon_punctatus
ENSPMGG00000012103lsm39883.505ENSSPAG00000000934lsm39583.505Stegastes_partitus
ENSPMGG00000012103lsm39694.737ENSSSCG00000011601LSM39394.737Sus_scrofa
ENSPMGG00000012103lsm39171.111ENSSSCG00000023718-9271.111Sus_scrofa
ENSPMGG00000012103lsm39694.737ENSTGUG00000008327LSM39394.737Taeniopygia_guttata
ENSPMGG00000012103lsm39894.845ENSTRUG00000023175lsm39594.845Takifugu_rubripes
ENSPMGG00000012103lsm39894.845ENSTNIG00000005589lsm39594.845Tetraodon_nigroviridis
ENSPMGG00000012103lsm39684.211ENSTBEG00000001050-9284.211Tupaia_belangeri
ENSPMGG00000012103lsm39694.737ENSTTRG00000011197LSM39394.737Tursiops_truncatus
ENSPMGG00000012103lsm39694.737ENSUAMG00000017250-9394.737Ursus_americanus
ENSPMGG00000012103lsm39694.737ENSUMAG00000015905LSM39394.737Ursus_maritimus
ENSPMGG00000012103lsm39694.737ENSVPAG00000010709LSM310094.737Vicugna_pacos
ENSPMGG00000012103lsm39691.579ENSVVUG00000007332-8591.579Vulpes_vulpes
ENSPMGG00000012103lsm39686.316ENSVVUG00000024228-9386.316Vulpes_vulpes
ENSPMGG00000012103lsm39689.474ENSVVUG00000005684-9389.474Vulpes_vulpes
ENSPMGG00000012103lsm39689.474ENSVVUG00000006481-9389.474Vulpes_vulpes
ENSPMGG00000012103lsm39691.579ENSVVUG00000029294-9391.579Vulpes_vulpes
ENSPMGG00000012103lsm39892.784ENSXETG00000011534lsm39592.784Xenopus_tropicalis
ENSPMGG00000012103lsm39895.876ENSXCOG00000017432LSM39595.876Xiphophorus_couchianus
ENSPMGG00000012103lsm39895.876ENSXMAG00000009151lsm39595.876Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us