EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000012171 (Gene tree)
Gene ID: -
Gene Symbol: clp1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 1631 bases
Position: chrKN462413.1:491076-492706
Accession: ZDB-GENE-030131-5306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000014849	Clp1	PF06807.14	5.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000015832	-	1323	-	ENSPMGP00000014849	440 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000012171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000012171's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000012171	clp1	99	76.267	ENSG00000172409	CLP1	99	76.267	Homo_sapiens
ENSPMGG00000012171	clp1	100	93.878	ENSAPOG00000008242	clp1	100	93.878	Acanthochromis_polyacanthus
ENSPMGG00000012171	clp1	99	76.552	ENSAMEG00000014551	CLP1	99	76.552	Ailuropoda_melanoleuca
ENSPMGG00000012171	clp1	100	92.744	ENSACIG00000006310	clp1	99	92.744	Amphilophus_citrinellus
ENSPMGG00000012171	clp1	100	93.878	ENSAOCG00000010681	clp1	100	93.878	Amphiprion_ocellaris
ENSPMGG00000012171	clp1	100	93.878	ENSAPEG00000012165	clp1	99	95.082	Amphiprion_percula
ENSPMGG00000012171	clp1	100	93.878	ENSATEG00000012374	clp1	100	93.878	Anabas_testudineus
ENSPMGG00000012171	clp1	98	76.512	ENSACAG00000007139	CLP1	99	76.512	Anolis_carolinensis
ENSPMGG00000012171	clp1	99	76.267	ENSANAG00000034935	CLP1	99	76.267	Aotus_nancymaae
ENSPMGG00000012171	clp1	100	92.971	ENSACLG00000013573	clp1	100	92.971	Astatotilapia_calliptera
ENSPMGG00000012171	clp1	100	83.705	ENSAMXG00000014194	clp1	98	86.321	Astyanax_mexicanus
ENSPMGG00000012171	clp1	99	76.267	ENSBTAG00000006493	CLP1	99	76.267	Bos_taurus
ENSPMGG00000012171	clp1	95	47.754	WBGene00010304	clpf-1	97	47.754	Caenorhabditis_elegans
ENSPMGG00000012171	clp1	99	76.267	ENSCJAG00000008748	CLP1	99	76.267	Callithrix_jacchus
ENSPMGG00000012171	clp1	99	76.267	ENSCAFG00000007815	CLP1	99	76.267	Canis_familiaris
ENSPMGG00000012171	clp1	99	76.267	ENSCAFG00020000903	CLP1	99	76.267	Canis_lupus_dingo
ENSPMGG00000012171	clp1	98	76.744	ENSCHIG00000023497	CLP1	99	76.744	Capra_hircus
ENSPMGG00000012171	clp1	98	76.744	ENSTSYG00000006824	CLP1	98	76.744	Carlito_syrichta
ENSPMGG00000012171	clp1	98	76.977	ENSCAPG00000009703	CLP1	99	76.977	Cavia_aperea
ENSPMGG00000012171	clp1	96	77.594	ENSCPOG00000012554	CLP1	99	77.594	Cavia_porcellus
ENSPMGG00000012171	clp1	96	77.358	ENSCCAG00000031957	CLP1	98	77.358	Cebus_capucinus
ENSPMGG00000012171	clp1	99	76.267	ENSCATG00000044628	CLP1	99	76.267	Cercocebus_atys
ENSPMGG00000012171	clp1	99	76.267	ENSCLAG00000004094	CLP1	99	76.267	Chinchilla_lanigera
ENSPMGG00000012171	clp1	99	76.267	ENSCSAG00000005994	CLP1	99	76.267	Chlorocebus_sabaeus
ENSPMGG00000012171	clp1	95	77.619	ENSCPBG00000016843	CLP1	97	77.619	Chrysemys_picta_bellii
ENSPMGG00000012171	clp1	98	60.277	ENSCING00000003779	-	99	60.277	Ciona_intestinalis
ENSPMGG00000012171	clp1	95	62.679	ENSCSAVG00000003437	-	96	62.679	Ciona_savignyi
ENSPMGG00000012171	clp1	99	76.267	ENSCANG00000034335	CLP1	99	76.267	Colobus_angolensis_palliatus
ENSPMGG00000012171	clp1	98	76.512	ENSCGRG00001002227	CLP1	99	76.512	Cricetulus_griseus_chok1gshd
ENSPMGG00000012171	clp1	98	76.512	ENSCGRG00000004328	CLP1	99	76.512	Cricetulus_griseus_crigri
ENSPMGG00000012171	clp1	100	90.476	ENSCSEG00000008614	clp1	100	90.476	Cynoglossus_semilaevis
ENSPMGG00000012171	clp1	100	92.290	ENSCVAG00000020101	clp1	100	92.290	Cyprinodon_variegatus
ENSPMGG00000012171	clp1	100	83.632	ENSDARG00000063663	clp1	100	84.305	Danio_rerio
ENSPMGG00000012171	clp1	98	75.982	ENSDNOG00000042415	CLP1	89	75.982	Dasypus_novemcinctus
ENSPMGG00000012171	clp1	98	76.744	ENSDORG00000014685	Clp1	99	76.744	Dipodomys_ordii
ENSPMGG00000012171	clp1	95	55.582	FBgn0033842	cbc	98	55.582	Drosophila_melanogaster
ENSPMGG00000012171	clp1	99	76.267	ENSETEG00000003009	CLP1	99	76.267	Echinops_telfairi
ENSPMGG00000012171	clp1	97	65.493	ENSEBUG00000011648	clp1	98	65.493	Eptatretus_burgeri
ENSPMGG00000012171	clp1	98	76.744	ENSEASG00005002093	CLP1	99	76.744	Equus_asinus_asinus
ENSPMGG00000012171	clp1	99	76.782	ENSECAG00000011597	CLP1	99	76.744	Equus_caballus
ENSPMGG00000012171	clp1	98	76.279	ENSEEUG00000012771	CLP1	99	76.279	Erinaceus_europaeus
ENSPMGG00000012171	clp1	96	87.972	ENSELUG00000024048	clp1	100	85.650	Esox_lucius
ENSPMGG00000012171	clp1	99	76.782	ENSFCAG00000006633	CLP1	99	76.744	Felis_catus
ENSPMGG00000012171	clp1	95	78.095	ENSFALG00000011145	CLP1	97	78.095	Ficedula_albicollis
ENSPMGG00000012171	clp1	99	76.267	ENSFDAG00000000234	CLP1	99	76.267	Fukomys_damarensis
ENSPMGG00000012171	clp1	100	92.290	ENSFHEG00000014760	CLP1	100	92.290	Fundulus_heteroclitus
ENSPMGG00000012171	clp1	100	88.662	ENSGMOG00000019340	clp1	100	88.662	Gadus_morhua
ENSPMGG00000012171	clp1	95	77.857	ENSGALG00000007370	CLP1	97	77.857	Gallus_gallus
ENSPMGG00000012171	clp1	100	92.063	ENSGAFG00000003020	clp1	100	92.063	Gambusia_affinis
ENSPMGG00000012171	clp1	100	93.878	ENSGACG00000017832	clp1	100	93.878	Gasterosteus_aculeatus
ENSPMGG00000012171	clp1	95	77.857	ENSGAGG00000013279	CLP1	97	77.857	Gopherus_agassizii
ENSPMGG00000012171	clp1	99	76.267	ENSGGOG00000023006	CLP1	99	76.267	Gorilla_gorilla
ENSPMGG00000012171	clp1	100	92.744	ENSHBUG00000010436	clp1	100	92.744	Haplochromis_burtoni
ENSPMGG00000012171	clp1	99	76.267	ENSHGLG00000009914	CLP1	99	76.267	Heterocephalus_glaber_female
ENSPMGG00000012171	clp1	99	76.267	ENSHGLG00100006105	CLP1	99	76.267	Heterocephalus_glaber_male
ENSPMGG00000012171	clp1	100	93.651	ENSHCOG00000010072	clp1	100	93.651	Hippocampus_comes
ENSPMGG00000012171	clp1	95	87.470	ENSIPUG00000016238	clp1	99	84.187	Ictalurus_punctatus
ENSPMGG00000012171	clp1	99	76.267	ENSSTOG00000029257	CLP1	99	76.267	Ictidomys_tridecemlineatus
ENSPMGG00000012171	clp1	99	76.267	ENSJJAG00000023691	Clp1	99	76.267	Jaculus_jaculus
ENSPMGG00000012171	clp1	100	92.290	ENSKMAG00000011990	clp1	100	92.290	Kryptolebias_marmoratus
ENSPMGG00000012171	clp1	100	92.971	ENSLBEG00000010201	clp1	100	92.971	Labrus_bergylta
ENSPMGG00000012171	clp1	98	75.116	ENSLACG00000003160	CLP1	99	75.116	Latimeria_chalumnae
ENSPMGG00000012171	clp1	72	86.025	ENSLOCG00000008074	clp1	100	86.025	Lepisosteus_oculatus
ENSPMGG00000012171	clp1	99	76.037	ENSLAFG00000014907	CLP1	99	76.037	Loxodonta_africana
ENSPMGG00000012171	clp1	99	76.267	ENSMFAG00000046074	CLP1	99	76.267	Macaca_fascicularis
ENSPMGG00000012171	clp1	99	75.973	ENSMMUG00000038007	CLP1	99	75.973	Macaca_mulatta
ENSPMGG00000012171	clp1	99	76.267	ENSMNEG00000000259	CLP1	99	76.267	Macaca_nemestrina
ENSPMGG00000012171	clp1	99	76.267	ENSMLEG00000043556	CLP1	99	76.267	Mandrillus_leucophaeus
ENSPMGG00000012171	clp1	100	93.424	ENSMAMG00000002149	clp1	100	93.424	Mastacembelus_armatus
ENSPMGG00000012171	clp1	100	92.971	ENSMZEG00005002850	clp1	100	92.971	Maylandia_zebra
ENSPMGG00000012171	clp1	95	77.857	ENSMGAG00000009643	CLP1	97	77.857	Meleagris_gallopavo
ENSPMGG00000012171	clp1	98	76.047	ENSMAUG00000016261	Clp1	99	76.047	Mesocricetus_auratus
ENSPMGG00000012171	clp1	99	76.267	ENSMICG00000004895	CLP1	99	76.267	Microcebus_murinus
ENSPMGG00000012171	clp1	98	76.744	ENSMOCG00000005498	Clp1	99	76.744	Microtus_ochrogaster
ENSPMGG00000012171	clp1	100	91.610	ENSMMOG00000003229	clp1	100	91.610	Mola_mola
ENSPMGG00000012171	clp1	95	77.857	ENSMODG00000024148	-	97	77.857	Monodelphis_domestica
ENSPMGG00000012171	clp1	95	77.857	ENSMODG00000020107	-	97	77.857	Monodelphis_domestica
ENSPMGG00000012171	clp1	100	92.290	ENSMALG00000014239	clp1	100	92.290	Monopterus_albus
ENSPMGG00000012171	clp1	98	76.512	MGP_CAROLIEiJ_G0023726	Clp1	99	76.512	Mus_caroli
ENSPMGG00000012171	clp1	98	76.512	ENSMUSG00000027079	Clp1	99	76.512	Mus_musculus
ENSPMGG00000012171	clp1	96	77.672	MGP_PahariEiJ_G0025177	Clp1	97	77.672	Mus_pahari
ENSPMGG00000012171	clp1	98	76.512	MGP_SPRETEiJ_G0024646	Clp1	99	76.512	Mus_spretus
ENSPMGG00000012171	clp1	99	76.267	ENSMPUG00000000268	CLP1	99	76.267	Mustela_putorius_furo
ENSPMGG00000012171	clp1	96	77.830	ENSMLUG00000007904	CLP1	98	77.830	Myotis_lucifugus
ENSPMGG00000012171	clp1	99	76.037	ENSNGAG00000006165	Clp1	99	76.037	Nannospalax_galili
ENSPMGG00000012171	clp1	100	93.197	ENSNBRG00000005225	clp1	100	93.197	Neolamprologus_brichardi
ENSPMGG00000012171	clp1	81	70.312	ENSNLEG00000012809	-	99	70.312	Nomascus_leucogenys
ENSPMGG00000012171	clp1	96	77.672	ENSMEUG00000010949	CLP1	97	77.672	Notamacropus_eugenii
ENSPMGG00000012171	clp1	69	78.218	ENSOPRG00000007329	CLP1	100	78.218	Ochotona_princeps
ENSPMGG00000012171	clp1	99	76.267	ENSODEG00000011410	CLP1	99	76.267	Octodon_degus
ENSPMGG00000012171	clp1	100	92.971	ENSONIG00000005089	clp1	100	92.971	Oreochromis_niloticus
ENSPMGG00000012171	clp1	96	77.594	ENSOCUG00000007045	CLP1	98	77.594	Oryctolagus_cuniculus
ENSPMGG00000012171	clp1	100	91.610	ENSORLG00000003647	clp1	100	91.610	Oryzias_latipes
ENSPMGG00000012171	clp1	100	91.383	ENSORLG00020016676	clp1	100	91.383	Oryzias_latipes_hni
ENSPMGG00000012171	clp1	100	91.610	ENSORLG00015019484	clp1	100	91.610	Oryzias_latipes_hsok
ENSPMGG00000012171	clp1	100	91.383	ENSOMEG00000021303	clp1	100	91.383	Oryzias_melastigma
ENSPMGG00000012171	clp1	98	76.744	ENSOGAG00000004508	CLP1	99	76.744	Otolemur_garnettii
ENSPMGG00000012171	clp1	96	76.651	ENSOARG00000010145	CLP1	96	76.651	Ovis_aries
ENSPMGG00000012171	clp1	99	76.267	ENSPPAG00000041519	CLP1	99	76.267	Pan_paniscus
ENSPMGG00000012171	clp1	98	76.744	ENSPPRG00000006135	CLP1	99	76.744	Panthera_pardus
ENSPMGG00000012171	clp1	98	76.744	ENSPTIG00000015866	CLP1	99	76.744	Panthera_tigris_altaica
ENSPMGG00000012171	clp1	99	76.267	ENSPTRG00000047318	CLP1	99	76.267	Pan_troglodytes
ENSPMGG00000012171	clp1	99	75.973	ENSPANG00000017078	CLP1	98	75.973	Papio_anubis
ENSPMGG00000012171	clp1	95	88.599	ENSPKIG00000007697	clp1	100	85.426	Paramormyrops_kingsleyae
ENSPMGG00000012171	clp1	90	75.063	ENSPSIG00000005468	CLP1	97	75.063	Pelodiscus_sinensis
ENSPMGG00000012171	clp1	98	76.744	ENSPEMG00000011213	-	99	76.744	Peromyscus_maniculatus_bairdii
ENSPMGG00000012171	clp1	95	67.458	ENSPMAG00000006707	clp1	97	67.458	Petromyzon_marinus
ENSPMGG00000012171	clp1	98	76.744	ENSPCIG00000011899	CLP1	99	76.744	Phascolarctos_cinereus
ENSPMGG00000012171	clp1	100	92.290	ENSPFOG00000008169	clp1	100	92.290	Poecilia_formosa
ENSPMGG00000012171	clp1	100	92.290	ENSPLAG00000022388	clp1	100	92.290	Poecilia_latipinna
ENSPMGG00000012171	clp1	100	92.290	ENSPMEG00000021088	clp1	100	92.290	Poecilia_mexicana
ENSPMGG00000012171	clp1	100	92.517	ENSPREG00000017802	clp1	100	92.517	Poecilia_reticulata
ENSPMGG00000012171	clp1	52	75.109	ENSPPYG00000003266	-	100	75.109	Pongo_abelii
ENSPMGG00000012171	clp1	99	76.552	ENSPCOG00000000360	CLP1	99	76.552	Propithecus_coquereli
ENSPMGG00000012171	clp1	99	76.267	ENSPVAG00000016270	CLP1	99	76.267	Pteropus_vampyrus
ENSPMGG00000012171	clp1	100	92.744	ENSPNYG00000017274	clp1	99	92.744	Pundamilia_nyererei
ENSPMGG00000012171	clp1	100	84.821	ENSPNAG00000026460	clp1	100	85.268	Pygocentrus_nattereri
ENSPMGG00000012171	clp1	98	76.512	ENSRNOG00000007416	Clp1	99	76.512	Rattus_norvegicus
ENSPMGG00000012171	clp1	99	76.267	ENSRBIG00000018191	CLP1	99	76.267	Rhinopithecus_bieti
ENSPMGG00000012171	clp1	99	76.267	ENSRROG00000039265	CLP1	99	76.267	Rhinopithecus_roxellana
ENSPMGG00000012171	clp1	94	63.527	ENSSBOG00000010558	-	93	63.527	Saimiri_boliviensis_boliviensis
ENSPMGG00000012171	clp1	99	76.267	ENSSBOG00000032517	-	99	76.267	Saimiri_boliviensis_boliviensis
ENSPMGG00000012171	clp1	96	77.910	ENSSHAG00000015695	CLP1	97	77.910	Sarcophilus_harrisii
ENSPMGG00000012171	clp1	95	86.682	ENSSFOG00015000628	clp1	100	84.106	Scleropages_formosus
ENSPMGG00000012171	clp1	100	93.424	ENSSMAG00000019423	clp1	99	93.424	Scophthalmus_maximus
ENSPMGG00000012171	clp1	100	93.424	ENSSDUG00000014495	clp1	100	93.424	Seriola_dumerili
ENSPMGG00000012171	clp1	100	93.197	ENSSLDG00000000937	clp1	100	93.197	Seriola_lalandi_dorsalis
ENSPMGG00000012171	clp1	52	75.000	ENSSARG00000002459	CLP1	100	75.000	Sorex_araneus
ENSPMGG00000012171	clp1	98	75.349	ENSSPUG00000016811	CLP1	99	75.349	Sphenodon_punctatus
ENSPMGG00000012171	clp1	100	92.971	ENSSPAG00000016052	clp1	100	92.971	Stegastes_partitus
ENSPMGG00000012171	clp1	99	76.267	ENSSSCG00000031442	CLP1	99	76.267	Sus_scrofa
ENSPMGG00000012171	clp1	95	77.857	ENSTGUG00000007002	CLP1	97	77.857	Taeniopygia_guttata
ENSPMGG00000012171	clp1	100	90.249	ENSTRUG00000012602	clp1	100	90.249	Takifugu_rubripes
ENSPMGG00000012171	clp1	100	89.569	ENSTNIG00000013125	clp1	100	89.569	Tetraodon_nigroviridis
ENSPMGG00000012171	clp1	95	77.619	ENSTBEG00000009975	CLP1	97	77.619	Tupaia_belangeri
ENSPMGG00000012171	clp1	96	77.594	ENSTTRG00000002096	CLP1	98	77.594	Tursiops_truncatus
ENSPMGG00000012171	clp1	99	76.267	ENSUAMG00000011388	CLP1	99	76.267	Ursus_americanus
ENSPMGG00000012171	clp1	99	76.267	ENSUMAG00000018317	CLP1	99	76.267	Ursus_maritimus
ENSPMGG00000012171	clp1	100	75.737	ENSVVUG00000017138	CLP1	99	75.737	Vulpes_vulpes
ENSPMGG00000012171	clp1	100	70.880	ENSXETG00000007088	clp1	100	71.106	Xenopus_tropicalis
ENSPMGG00000012171	clp1	100	92.290	ENSXCOG00000002287	clp1	100	92.290	Xiphophorus_couchianus
ENSPMGG00000012171	clp1	100	92.290	ENSXMAG00000009783	clp1	100	92.290	Xiphophorus_maculatus