EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000012622 (Gene tree)
Gene ID: -
Gene Symbol: prdm5
Alias: -
Full Name: PR domain containing 5
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 47605 bases
Position: chrKN468085.1:44576-92180
Accession: ZDB-GENE-040708-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000015392	zf-C2H2	PF00096.26	2.8e-61	1	12
ENSPMGP00000015392	zf-C2H2	PF00096.26	2.8e-61	2	12
ENSPMGP00000015392	zf-C2H2	PF00096.26	2.8e-61	3	12
ENSPMGP00000015392	zf-C2H2	PF00096.26	2.8e-61	4	12
ENSPMGP00000015392	zf-C2H2	PF00096.26	2.8e-61	5	12
ENSPMGP00000015392	zf-C2H2	PF00096.26	2.8e-61	6	12
ENSPMGP00000015392	zf-C2H2	PF00096.26	2.8e-61	7	12
ENSPMGP00000015392	zf-C2H2	PF00096.26	2.8e-61	8	12
ENSPMGP00000015392	zf-C2H2	PF00096.26	2.8e-61	9	12
ENSPMGP00000015392	zf-C2H2	PF00096.26	2.8e-61	10	12
ENSPMGP00000015392	zf-C2H2	PF00096.26	2.8e-61	11	12
ENSPMGP00000015392	zf-C2H2	PF00096.26	2.8e-61	12	12
ENSPMGP00000015392	zf-met	PF12874.7	2e-19	1	2
ENSPMGP00000015392	zf-met	PF12874.7	2e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000016417	-	1743	-	ENSPMGP00000015392	580 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000012622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000012622's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000012622	prdm5	100	77.833	ENSG00000138738	PRDM5	100	77.833	Homo_sapiens
ENSPMGG00000012622	prdm5	100	93.232	ENSAPOG00000023220	prdm5	100	93.063	Acanthochromis_polyacanthus
ENSPMGG00000012622	prdm5	90	69.808	ENSAMEG00000003050	PRDM5	100	69.634	Ailuropoda_melanoleuca
ENSPMGG00000012622	prdm5	100	91.864	ENSACIG00000000406	prdm5	100	91.695	Amphilophus_citrinellus
ENSPMGG00000012622	prdm5	100	94.088	ENSAOCG00000014806	prdm5	100	94.088	Amphiprion_ocellaris
ENSPMGG00000012622	prdm5	100	83.361	ENSAPEG00000016846	prdm5	100	84.666	Amphiprion_percula
ENSPMGG00000012622	prdm5	100	94.576	ENSATEG00000013829	prdm5	100	94.576	Anabas_testudineus
ENSPMGG00000012622	prdm5	95	78.275	ENSAPLG00000013828	PRDM5	100	79.934	Anas_platyrhynchos
ENSPMGG00000012622	prdm5	100	75.119	ENSACAG00000012999	PRDM5	100	75.119	Anolis_carolinensis
ENSPMGG00000012622	prdm5	100	88.667	ENSANAG00000027411	PRDM5	100	88.667	Aotus_nancymaae
ENSPMGG00000012622	prdm5	100	95.424	ENSACLG00000017996	prdm5	100	94.407	Astatotilapia_calliptera
ENSPMGG00000012622	prdm5	84	82.576	ENSAMXG00000041864	prdm5	99	83.523	Astyanax_mexicanus
ENSPMGG00000012622	prdm5	100	73.851	ENSBTAG00000012111	PRDM5	100	73.217	Bos_taurus
ENSPMGG00000012622	prdm5	100	88.000	ENSCJAG00000003133	PRDM5	100	88.000	Callithrix_jacchus
ENSPMGG00000012622	prdm5	91	68.910	ENSCAFG00000004179	PRDM5	96	68.677	Canis_familiaris
ENSPMGG00000012622	prdm5	100	77.667	ENSCAFG00020017685	PRDM5	100	77.167	Canis_lupus_dingo
ENSPMGG00000012622	prdm5	100	77.667	ENSCHIG00000018772	PRDM5	100	76.333	Capra_hircus
ENSPMGG00000012622	prdm5	94	76.893	ENSTSYG00000009630	PRDM5	94	76.699	Carlito_syrichta
ENSPMGG00000012622	prdm5	90	88.000	ENSCAPG00000015217	PRDM5	100	88.000	Cavia_aperea
ENSPMGG00000012622	prdm5	90	88.000	ENSCPOG00000012883	PRDM5	100	88.000	Cavia_porcellus
ENSPMGG00000012622	prdm5	100	88.667	ENSCCAG00000023157	PRDM5	100	88.667	Cebus_capucinus
ENSPMGG00000012622	prdm5	100	88.667	ENSCATG00000042510	PRDM5	100	88.667	Cercocebus_atys
ENSPMGG00000012622	prdm5	90	88.000	ENSCLAG00000005392	PRDM5	100	88.000	Chinchilla_lanigera
ENSPMGG00000012622	prdm5	100	78.333	ENSCSAG00000003729	PRDM5	100	78.333	Chlorocebus_sabaeus
ENSPMGG00000012622	prdm5	99	73.776	ENSCHOG00000007801	PRDM5	91	73.776	Choloepus_hoffmanni
ENSPMGG00000012622	prdm5	100	79.688	ENSCPBG00000024735	PRDM5	100	77.812	Chrysemys_picta_bellii
ENSPMGG00000012622	prdm5	100	88.667	ENSCANG00000036807	PRDM5	100	88.667	Colobus_angolensis_palliatus
ENSPMGG00000012622	prdm5	99	88.000	ENSCGRG00001010581	Prdm5	100	88.000	Cricetulus_griseus_chok1gshd
ENSPMGG00000012622	prdm5	95	69.755	ENSCGRG00000010996	-	99	69.406	Cricetulus_griseus_crigri
ENSPMGG00000012622	prdm5	100	90.725	ENSCSEG00000019979	prdm5	100	91.737	Cynoglossus_semilaevis
ENSPMGG00000012622	prdm5	100	85.900	ENSCVAG00000013692	prdm5	100	85.737	Cyprinodon_variegatus
ENSPMGG00000012622	prdm5	100	81.646	ENSDARG00000006288	prdm5	100	81.804	Danio_rerio
ENSPMGG00000012622	prdm5	90	72.917	ENSDNOG00000002009	PRDM5	100	72.743	Dasypus_novemcinctus
ENSPMGG00000012622	prdm5	100	81.962	ENSDORG00000007739	Prdm5	76	81.962	Dipodomys_ordii
ENSPMGG00000012622	prdm5	94	75.439	ENSETEG00000020268	PRDM5	84	81.720	Echinops_telfairi
ENSPMGG00000012622	prdm5	99	72.437	ENSEBUG00000004301	prdm5	100	72.466	Eptatretus_burgeri
ENSPMGG00000012622	prdm5	100	89.333	ENSEASG00005018365	PRDM5	100	89.333	Equus_asinus_asinus
ENSPMGG00000012622	prdm5	99	76.070	ENSECAG00000011516	PRDM5	89	75.681	Equus_caballus
ENSPMGG00000012622	prdm5	100	61.420	ENSECAG00000024747	-	100	71.651	Equus_caballus
ENSPMGG00000012622	prdm5	99	71.404	ENSEEUG00000010306	PRDM5	100	69.844	Erinaceus_europaeus
ENSPMGG00000012622	prdm5	99	84.288	ENSELUG00000005894	prdm5	93	84.288	Esox_lucius
ENSPMGG00000012622	prdm5	100	77.667	ENSFCAG00000025656	PRDM5	100	77.167	Felis_catus
ENSPMGG00000012622	prdm5	99	66.149	ENSFALG00000008381	PRDM5	100	69.565	Ficedula_albicollis
ENSPMGG00000012622	prdm5	100	88.000	ENSFDAG00000021361	PRDM5	100	88.000	Fukomys_damarensis
ENSPMGG00000012622	prdm5	100	93.729	ENSFHEG00000013040	prdm5	100	93.559	Fundulus_heteroclitus
ENSPMGG00000012622	prdm5	96	76.316	ENSGMOG00000012038	prdm5	100	76.316	Gadus_morhua
ENSPMGG00000012622	prdm5	100	79.338	ENSGALG00000011963	PRDM5	100	80.757	Gallus_gallus
ENSPMGG00000012622	prdm5	100	90.000	ENSGAFG00000019233	prdm5	100	90.169	Gambusia_affinis
ENSPMGG00000012622	prdm5	98	74.761	ENSGAGG00000020362	PRDM5	99	73.231	Gopherus_agassizii
ENSPMGG00000012622	prdm5	100	88.667	ENSGGOG00000013562	PRDM5	100	88.667	Gorilla_gorilla
ENSPMGG00000012622	prdm5	100	93.898	ENSHBUG00000023375	prdm5	100	93.729	Haplochromis_burtoni
ENSPMGG00000012622	prdm5	100	74.797	ENSHGLG00000003010	PRDM5	100	74.684	Heterocephalus_glaber_female
ENSPMGG00000012622	prdm5	100	88.000	ENSHGLG00100003696	PRDM5	100	88.000	Heterocephalus_glaber_male
ENSPMGG00000012622	prdm5	100	88.424	ENSHCOG00000012131	prdm5	100	88.424	Hippocampus_comes
ENSPMGG00000012622	prdm5	100	87.081	ENSIPUG00000001248	prdm5	100	87.081	Ictalurus_punctatus
ENSPMGG00000012622	prdm5	90	86.667	ENSSTOG00000004741	PRDM5	100	86.667	Ictidomys_tridecemlineatus
ENSPMGG00000012622	prdm5	95	82.595	ENSJJAG00000011464	Prdm5	100	87.333	Jaculus_jaculus
ENSPMGG00000012622	prdm5	100	93.412	ENSKMAG00000013663	prdm5	100	93.412	Kryptolebias_marmoratus
ENSPMGG00000012622	prdm5	100	89.372	ENSLBEG00000022736	prdm5	100	89.372	Labrus_bergylta
ENSPMGG00000012622	prdm5	91	78.584	ENSLACG00000009187	PRDM5	99	79.130	Latimeria_chalumnae
ENSPMGG00000012622	prdm5	100	84.505	ENSLOCG00000009778	prdm5	99	84.505	Lepisosteus_oculatus
ENSPMGG00000012622	prdm5	100	77.833	ENSLAFG00000006532	PRDM5	99	80.696	Loxodonta_africana
ENSPMGG00000012622	prdm5	100	88.667	ENSMFAG00000045845	PRDM5	100	88.667	Macaca_fascicularis
ENSPMGG00000012622	prdm5	100	88.667	ENSMMUG00000003249	PRDM5	100	88.667	Macaca_mulatta
ENSPMGG00000012622	prdm5	100	88.667	ENSMNEG00000019018	PRDM5	100	88.667	Macaca_nemestrina
ENSPMGG00000012622	prdm5	95	77.680	ENSMLEG00000023145	PRDM5	100	76.977	Mandrillus_leucophaeus
ENSPMGG00000012622	prdm5	100	91.489	ENSMAMG00000013419	prdm5	100	91.489	Mastacembelus_armatus
ENSPMGG00000012622	prdm5	100	93.898	ENSMZEG00005020645	prdm5	100	93.729	Maylandia_zebra
ENSPMGG00000012622	prdm5	95	80.265	ENSMGAG00000010710	PRDM5	100	80.265	Meleagris_gallopavo
ENSPMGG00000012622	prdm5	99	88.000	ENSMAUG00000006768	Prdm5	100	88.000	Mesocricetus_auratus
ENSPMGG00000012622	prdm5	100	88.000	ENSMICG00000001459	PRDM5	100	88.000	Microcebus_murinus
ENSPMGG00000012622	prdm5	99	88.000	ENSMOCG00000016267	Prdm5	100	88.000	Microtus_ochrogaster
ENSPMGG00000012622	prdm5	100	93.570	ENSMMOG00000006035	prdm5	100	93.570	Mola_mola
ENSPMGG00000012622	prdm5	100	76.461	ENSMODG00000018942	PRDM5	100	77.251	Monodelphis_domestica
ENSPMGG00000012622	prdm5	100	92.295	ENSMALG00000013934	prdm5	100	92.295	Monopterus_albus
ENSPMGG00000012622	prdm5	99	87.333	MGP_CAROLIEiJ_G0028463	Prdm5	100	87.333	Mus_caroli
ENSPMGG00000012622	prdm5	99	87.333	ENSMUSG00000029913	Prdm5	100	87.333	Mus_musculus
ENSPMGG00000012622	prdm5	99	87.333	MGP_PahariEiJ_G0022203	Prdm5	100	87.333	Mus_pahari
ENSPMGG00000012622	prdm5	99	87.333	MGP_SPRETEiJ_G0029467	Prdm5	100	87.333	Mus_spretus
ENSPMGG00000012622	prdm5	100	73.851	ENSMPUG00000017415	PRDM5	100	73.693	Mustela_putorius_furo
ENSPMGG00000012622	prdm5	90	66.667	ENSMLUG00000006097	PRDM5	100	66.667	Myotis_lucifugus
ENSPMGG00000012622	prdm5	99	87.333	ENSNGAG00000018317	Prdm5	100	87.333	Nannospalax_galili
ENSPMGG00000012622	prdm5	100	84.641	ENSNBRG00000004976	prdm5	100	90.034	Neolamprologus_brichardi
ENSPMGG00000012622	prdm5	100	88.667	ENSNLEG00000009107	PRDM5	100	88.667	Nomascus_leucogenys
ENSPMGG00000012622	prdm5	84	83.051	ENSMEUG00000006576	-	71	83.051	Notamacropus_eugenii
ENSPMGG00000012622	prdm5	93	75.665	ENSOPRG00000011066	-	72	71.228	Ochotona_princeps
ENSPMGG00000012622	prdm5	99	88.000	ENSODEG00000009133	PRDM5	100	88.000	Octodon_degus
ENSPMGG00000012622	prdm5	100	89.189	ENSONIG00000003111	prdm5	99	89.189	Oreochromis_niloticus
ENSPMGG00000012622	prdm5	52	94.444	ENSOANG00000006197	-	100	94.444	Ornithorhynchus_anatinus
ENSPMGG00000012622	prdm5	99	76.411	ENSOANG00000015109	PRDM5	97	77.207	Ornithorhynchus_anatinus
ENSPMGG00000012622	prdm5	93	66.327	ENSOCUG00000013454	PRDM5	100	67.347	Oryctolagus_cuniculus
ENSPMGG00000012622	prdm5	100	92.712	ENSORLG00000016247	prdm5	100	92.542	Oryzias_latipes
ENSPMGG00000012622	prdm5	100	92.034	ENSORLG00020018051	prdm5	100	91.554	Oryzias_latipes_hni
ENSPMGG00000012622	prdm5	100	92.712	ENSORLG00015013760	prdm5	100	92.542	Oryzias_latipes_hsok
ENSPMGG00000012622	prdm5	100	93.063	ENSOMEG00000005143	prdm5	100	92.893	Oryzias_melastigma
ENSPMGG00000012622	prdm5	83	65.602	ENSOGAG00000009996	PRDM5	98	64.925	Otolemur_garnettii
ENSPMGG00000012622	prdm5	94	72.778	ENSOARG00000015473	PRDM5	100	67.467	Ovis_aries
ENSPMGG00000012622	prdm5	94	76.699	ENSPPAG00000043045	PRDM5	100	76.699	Pan_paniscus
ENSPMGG00000012622	prdm5	100	77.667	ENSPPRG00000001020	PRDM5	100	77.167	Panthera_pardus
ENSPMGG00000012622	prdm5	95	77.153	ENSPTIG00000010807	PRDM5	95	76.626	Panthera_tigris_altaica
ENSPMGG00000012622	prdm5	100	88.667	ENSPTRG00000016403	PRDM5	100	88.667	Pan_troglodytes
ENSPMGG00000012622	prdm5	100	88.667	ENSPANG00000023612	PRDM5	100	88.667	Papio_anubis
ENSPMGG00000012622	prdm5	100	55.829	ENSPKIG00000015492	prdm5	100	65.651	Paramormyrops_kingsleyae
ENSPMGG00000012622	prdm5	100	79.968	ENSPSIG00000013505	PRDM5	100	79.968	Pelodiscus_sinensis
ENSPMGG00000012622	prdm5	73	65.012	ENSPMAG00000005248	prdm5	100	66.102	Petromyzon_marinus
ENSPMGG00000012622	prdm5	98	88.978	ENSPFOG00000018630	prdm5	99	88.710	Poecilia_formosa
ENSPMGG00000012622	prdm5	100	89.516	ENSPLAG00000014148	prdm5	100	89.355	Poecilia_latipinna
ENSPMGG00000012622	prdm5	100	94.915	ENSPMEG00000018002	prdm5	100	94.068	Poecilia_mexicana
ENSPMGG00000012622	prdm5	100	94.915	ENSPREG00000018366	prdm5	100	94.068	Poecilia_reticulata
ENSPMGG00000012622	prdm5	100	74.643	ENSPPYG00000015031	PRDM5	100	74.010	Pongo_abelii
ENSPMGG00000012622	prdm5	95	70.333	ENSPCAG00000011671	PRDM5	100	69.833	Procavia_capensis
ENSPMGG00000012622	prdm5	100	88.000	ENSPCOG00000022828	PRDM5	100	88.000	Propithecus_coquereli
ENSPMGG00000012622	prdm5	95	71.167	ENSPVAG00000012309	PRDM5	100	70.833	Pteropus_vampyrus
ENSPMGG00000012622	prdm5	100	95.254	ENSPNYG00000012194	prdm5	100	94.237	Pundamilia_nyererei
ENSPMGG00000012622	prdm5	100	89.226	ENSPNAG00000026181	prdm5	100	90.067	Pygocentrus_nattereri
ENSPMGG00000012622	prdm5	93	78.268	ENSPNAG00000023191	-	100	78.438	Pygocentrus_nattereri
ENSPMGG00000012622	prdm5	99	74.910	ENSRNOG00000023679	Prdm5	99	74.910	Rattus_norvegicus
ENSPMGG00000012622	prdm5	100	88.667	ENSRBIG00000041307	PRDM5	100	88.667	Rhinopithecus_bieti
ENSPMGG00000012622	prdm5	94	64.336	ENSRROG00000035343	PRDM5	100	68.717	Rhinopithecus_roxellana
ENSPMGG00000012622	prdm5	100	88.667	ENSSBOG00000022100	PRDM5	100	88.667	Saimiri_boliviensis_boliviensis
ENSPMGG00000012622	prdm5	90	71.984	ENSSHAG00000003250	PRDM5	100	72.597	Sarcophilus_harrisii
ENSPMGG00000012622	prdm5	100	83.306	ENSSFOG00015020478	prdm5	100	83.306	Scleropages_formosus
ENSPMGG00000012622	prdm5	100	94.576	ENSSMAG00000018844	prdm5	100	94.576	Scophthalmus_maximus
ENSPMGG00000012622	prdm5	100	94.407	ENSSDUG00000020397	prdm5	100	94.407	Seriola_dumerili
ENSPMGG00000012622	prdm5	100	94.407	ENSSLDG00000013353	prdm5	100	94.407	Seriola_lalandi_dorsalis
ENSPMGG00000012622	prdm5	88	88.889	ENSSARG00000014129	-	64	88.889	Sorex_araneus
ENSPMGG00000012622	prdm5	100	95.333	ENSSPUG00000009941	PRDM5	100	95.333	Sphenodon_punctatus
ENSPMGG00000012622	prdm5	100	90.016	ENSSPAG00000013866	prdm5	100	90.016	Stegastes_partitus
ENSPMGG00000012622	prdm5	100	78.167	ENSSSCG00000009101	PRDM5	100	77.667	Sus_scrofa
ENSPMGG00000012622	prdm5	95	79.333	ENSTGUG00000001920	PRDM5	100	80.500	Taeniopygia_guttata
ENSPMGG00000012622	prdm5	100	91.737	ENSTRUG00000013850	prdm5	100	92.580	Takifugu_rubripes
ENSPMGG00000012622	prdm5	100	75.246	ENSTNIG00000005901	prdm5	100	75.960	Tetraodon_nigroviridis
ENSPMGG00000012622	prdm5	95	67.114	ENSTBEG00000015386	PRDM5	86	67.114	Tupaia_belangeri
ENSPMGG00000012622	prdm5	100	73.217	ENSTTRG00000010996	PRDM5	100	73.217	Tursiops_truncatus
ENSPMGG00000012622	prdm5	94	81.818	ENSUAMG00000009994	PRDM5	77	80.769	Ursus_americanus
ENSPMGG00000012622	prdm5	95	83.861	ENSUMAG00000003733	PRDM5	99	75.923	Ursus_maritimus
ENSPMGG00000012622	prdm5	97	65.090	ENSVPAG00000007435	PRDM5	100	64.600	Vicugna_pacos
ENSPMGG00000012622	prdm5	93	72.789	ENSVVUG00000013192	PRDM5	100	72.279	Vulpes_vulpes
ENSPMGG00000012622	prdm5	100	75.633	ENSXETG00000002101	prdm5	100	75.949	Xenopus_tropicalis
ENSPMGG00000012622	prdm5	100	94.915	ENSXCOG00000008567	prdm5	100	94.915	Xiphophorus_couchianus
ENSPMGG00000012622	prdm5	100	94.915	ENSXMAG00000013825	prdm5	100	94.915	Xiphophorus_maculatus