EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000013112 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 1711 bases
Position: chrKN468313.1:1302578-1304288
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000016220	RRM_1	PF00076.22	1.3e-32	1	2
ENSPMGP00000016220	RRM_1	PF00076.22	1.3e-32	2	2
ENSPMGP00000016276	RRM_1	PF00076.22	1.9e-32	1	2
ENSPMGP00000016276	RRM_1	PF00076.22	1.9e-32	2	2
ENSPMGP00000016035	RRM_1	PF00076.22	2.5e-32	1	2
ENSPMGP00000016035	RRM_1	PF00076.22	2.5e-32	2	2
ENSPMGP00000016197	RRM_1	PF00076.22	2.9e-32	1	2
ENSPMGP00000016197	RRM_1	PF00076.22	2.9e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000017280	-	759	-	ENSPMGP00000016197	252 (aa)	-	-
ENSPMGT00000017305	-	702	-	ENSPMGP00000016220	233 (aa)	-	-
ENSPMGT00000017106	-	723	-	ENSPMGP00000016035	240 (aa)	-	-
ENSPMGT00000017368	-	669	-	ENSPMGP00000016276	222 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000013112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000013112's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000013112	-	99	85.654	ENSG00000136450	SRSF1	94	93.443	Homo_sapiens
ENSPMGG00000013112	-	82	90.761	ENSAPOG00000008542	-	78	90.761	Acanthochromis_polyacanthus
ENSPMGG00000013112	-	100	96.825	ENSAPOG00000002748	-	100	96.825	Acanthochromis_polyacanthus
ENSPMGG00000013112	-	82	87.097	ENSAMEG00000002635	SRSF1	77	90.860	Ailuropoda_melanoleuca
ENSPMGG00000013112	-	100	96.087	ENSACIG00000008091	srsf1a	100	96.087	Amphilophus_citrinellus
ENSPMGG00000013112	-	100	97.222	ENSAOCG00000010671	-	100	97.222	Amphiprion_ocellaris
ENSPMGG00000013112	-	79	90.955	ENSAOCG00000000337	-	80	88.442	Amphiprion_ocellaris
ENSPMGG00000013112	-	100	97.222	ENSAPEG00000009915	-	100	97.222	Amphiprion_percula
ENSPMGG00000013112	-	79	90.955	ENSAPEG00000023352	-	79	88.442	Amphiprion_percula
ENSPMGG00000013112	-	82	86.911	ENSATEG00000021567	-	92	81.900	Anabas_testudineus
ENSPMGG00000013112	-	83	94.819	ENSATEG00000022403	-	100	96.457	Anabas_testudineus
ENSPMGG00000013112	-	79	90.404	ENSACAG00000005542	-	78	88.384	Anolis_carolinensis
ENSPMGG00000013112	-	83	67.027	ENSANAG00000025417	-	73	68.681	Aotus_nancymaae
ENSPMGG00000013112	-	99	85.654	ENSANAG00000020583	-	95	89.855	Aotus_nancymaae
ENSPMGG00000013112	-	58	77.419	ENSAMXG00000024373	-	72	74.194	Astyanax_mexicanus
ENSPMGG00000013112	-	95	84.141	ENSAMXG00000035996	srsf1a	79	90.909	Astyanax_mexicanus
ENSPMGG00000013112	-	99	85.654	ENSBTAG00000014766	SRSF1	88	83.857	Bos_taurus
ENSPMGG00000013112	-	99	85.654	ENSCJAG00000041713	-	95	89.855	Callithrix_jacchus
ENSPMGG00000013112	-	79	83.333	ENSCJAG00000008111	-	86	81.865	Callithrix_jacchus
ENSPMGG00000013112	-	99	85.654	ENSCAFG00000017430	SRSF1	88	83.857	Canis_familiaris
ENSPMGG00000013112	-	99	85.654	ENSCAFG00020025632	-	88	83.857	Canis_lupus_dingo
ENSPMGG00000013112	-	79	91.414	ENSCHIG00000010787	SRSF1	78	89.394	Capra_hircus
ENSPMGG00000013112	-	99	85.654	ENSTSYG00000013899	-	95	89.855	Carlito_syrichta
ENSPMGG00000013112	-	99	85.654	ENSCPOG00000032681	-	88	83.857	Cavia_porcellus
ENSPMGG00000013112	-	99	85.654	ENSCCAG00000029484	-	95	89.855	Cebus_capucinus
ENSPMGG00000013112	-	99	85.654	ENSCATG00000042294	-	95	89.855	Cercocebus_atys
ENSPMGG00000013112	-	99	85.654	ENSCLAG00000014707	-	88	83.857	Chinchilla_lanigera
ENSPMGG00000013112	-	99	84.810	ENSCSAG00000005642	-	88	82.960	Chlorocebus_sabaeus
ENSPMGG00000013112	-	79	91.414	ENSCHOG00000001899	SRSF1	78	89.394	Choloepus_hoffmanni
ENSPMGG00000013112	-	99	85.232	ENSCPBG00000009851	-	88	83.408	Chrysemys_picta_bellii
ENSPMGG00000013112	-	99	85.654	ENSCANG00000029726	-	95	89.855	Colobus_angolensis_palliatus
ENSPMGG00000013112	-	99	85.654	ENSCGRG00001000670	Srsf1	88	83.857	Cricetulus_griseus_chok1gshd
ENSPMGG00000013112	-	99	85.654	ENSCGRG00000005590	Srsf1	88	83.857	Cricetulus_griseus_crigri
ENSPMGG00000013112	-	79	83.163	ENSCSEG00000009973	-	79	82.692	Cynoglossus_semilaevis
ENSPMGG00000013112	-	100	97.222	ENSCSEG00000014272	-	100	97.222	Cynoglossus_semilaevis
ENSPMGG00000013112	-	100	96.825	ENSCVAG00000018617	-	100	96.825	Cyprinodon_variegatus
ENSPMGG00000013112	-	81	86.170	ENSCVAG00000005458	-	92	85.185	Cyprinodon_variegatus
ENSPMGG00000013112	-	79	88.947	ENSDARG00000057691	srsf1a	99	85.864	Danio_rerio
ENSPMGG00000013112	-	79	90.909	ENSDARG00000017843	srsf1b	79	89.119	Danio_rerio
ENSPMGG00000013112	-	99	85.654	ENSDNOG00000011737	-	88	83.857	Dasypus_novemcinctus
ENSPMGG00000013112	-	99	85.654	ENSDORG00000015082	Srsf1	88	83.857	Dipodomys_ordii
ENSPMGG00000013112	-	85	86.294	ENSETEG00000005349	-	63	87.766	Echinops_telfairi
ENSPMGG00000013112	-	99	85.654	ENSEASG00005002922	-	88	83.857	Equus_asinus_asinus
ENSPMGG00000013112	-	79	91.414	ENSECAG00000016654	SRSF1	78	89.394	Equus_caballus
ENSPMGG00000013112	-	82	90.104	ENSEEUG00000009255	-	62	89.730	Erinaceus_europaeus
ENSPMGG00000013112	-	82	90.104	ENSELUG00000021646	srsf1a	76	91.146	Esox_lucius
ENSPMGG00000013112	-	99	85.654	ENSFCAG00000002250	-	93	86.979	Felis_catus
ENSPMGG00000013112	-	78	94.340	ENSFALG00000005062	-	93	65.678	Ficedula_albicollis
ENSPMGG00000013112	-	99	85.654	ENSFDAG00000010646	-	88	83.857	Fukomys_damarensis
ENSPMGG00000013112	-	100	96.429	ENSFHEG00000003174	srsf1a	100	96.429	Fundulus_heteroclitus
ENSPMGG00000013112	-	84	91.579	ENSGMOG00000014787	-	80	90.270	Gadus_morhua
ENSPMGG00000013112	-	79	90.909	ENSGALG00000005525	SRSF1	78	88.889	Gallus_gallus
ENSPMGG00000013112	-	82	87.568	ENSGACG00000020621	srsf1b	78	87.568	Gasterosteus_aculeatus
ENSPMGG00000013112	-	99	85.232	ENSGAGG00000022965	-	88	83.408	Gopherus_agassizii
ENSPMGG00000013112	-	99	85.654	ENSGGOG00000004386	SRSF1	95	89.855	Gorilla_gorilla
ENSPMGG00000013112	-	100	96.087	ENSHBUG00000016788	srsf1a	100	96.032	Haplochromis_burtoni
ENSPMGG00000013112	-	70	91.124	ENSHGLG00000000669	-	76	88.757	Heterocephalus_glaber_female
ENSPMGG00000013112	-	70	91.124	ENSHGLG00000000600	-	76	88.757	Heterocephalus_glaber_female
ENSPMGG00000013112	-	99	85.654	ENSHGLG00100016906	-	88	83.857	Heterocephalus_glaber_male
ENSPMGG00000013112	-	80	93.048	ENSHCOG00000018918	srsf1a	94	78.512	Hippocampus_comes
ENSPMGG00000013112	-	82	88.021	ENSIPUG00000008750	srsf1b	78	89.583	Ictalurus_punctatus
ENSPMGG00000013112	-	80	89.362	ENSIPUG00000017039	srsf1a	80	90.050	Ictalurus_punctatus
ENSPMGG00000013112	-	99	85.654	ENSSTOG00000000243	-	95	87.179	Ictidomys_tridecemlineatus
ENSPMGG00000013112	-	51	82.812	ENSJJAG00000014464	-	92	81.301	Jaculus_jaculus
ENSPMGG00000013112	-	99	85.654	ENSJJAG00000000102	-	88	83.857	Jaculus_jaculus
ENSPMGG00000013112	-	100	96.429	ENSKMAG00000019232	srsf1a	100	96.429	Kryptolebias_marmoratus
ENSPMGG00000013112	-	100	96.429	ENSLBEG00000020864	-	100	96.429	Labrus_bergylta
ENSPMGG00000013112	-	78	83.957	ENSLBEG00000015294	-	79	80.303	Labrus_bergylta
ENSPMGG00000013112	-	82	86.458	ENSLACG00000014160	srsf1a	72	88.021	Latimeria_chalumnae
ENSPMGG00000013112	-	82	87.500	ENSLOCG00000005994	srsf1a	78	89.062	Lepisosteus_oculatus
ENSPMGG00000013112	-	82	91.758	ENSLAFG00000025743	SRSF1	76	91.758	Loxodonta_africana
ENSPMGG00000013112	-	99	85.654	ENSMFAG00000040003	-	95	89.855	Macaca_fascicularis
ENSPMGG00000013112	-	99	83.133	ENSMMUG00000003260	-	93	86.458	Macaca_mulatta
ENSPMGG00000013112	-	99	85.654	ENSMMUG00000004725	SRSF1	95	89.855	Macaca_mulatta
ENSPMGG00000013112	-	99	83.534	ENSMNEG00000015983	-	88	82.063	Macaca_nemestrina
ENSPMGG00000013112	-	99	85.654	ENSMNEG00000027680	-	95	89.855	Macaca_nemestrina
ENSPMGG00000013112	-	79	91.414	ENSMLEG00000040509	SRSF1	78	89.394	Mandrillus_leucophaeus
ENSPMGG00000013112	-	99	80.169	ENSMLEG00000015243	-	88	82.110	Mandrillus_leucophaeus
ENSPMGG00000013112	-	82	89.062	ENSMAMG00000019691	-	80	90.104	Mastacembelus_armatus
ENSPMGG00000013112	-	82	89.840	ENSMAMG00000019687	-	91	86.301	Mastacembelus_armatus
ENSPMGG00000013112	-	100	97.222	ENSMAMG00000018454	-	100	97.222	Mastacembelus_armatus
ENSPMGG00000013112	-	99	85.654	ENSMAUG00000021845	Srsf1	88	83.857	Mesocricetus_auratus
ENSPMGG00000013112	-	99	85.654	ENSMICG00000013639	-	95	89.855	Microcebus_murinus
ENSPMGG00000013112	-	99	85.654	ENSMOCG00000001996	Srsf1	88	83.857	Microtus_ochrogaster
ENSPMGG00000013112	-	100	94.805	ENSMMOG00000014354	srsf1a	100	94.805	Mola_mola
ENSPMGG00000013112	-	82	91.146	ENSMODG00000014781	-	64	89.005	Monodelphis_domestica
ENSPMGG00000013112	-	83	94.819	ENSMALG00000017129	-	76	94.819	Monopterus_albus
ENSPMGG00000013112	-	85	82.011	ENSMALG00000007763	-	77	86.264	Monopterus_albus
ENSPMGG00000013112	-	99	85.654	MGP_CAROLIEiJ_G0016943	Srsf1	94	87.113	Mus_caroli
ENSPMGG00000013112	-	99	85.654	ENSMUSG00000018379	Srsf1	94	87.113	Mus_musculus
ENSPMGG00000013112	-	99	85.654	MGP_PahariEiJ_G0018074	Srsf1	88	83.857	Mus_pahari
ENSPMGG00000013112	-	99	85.654	MGP_SPRETEiJ_G0017790	Srsf1	94	87.113	Mus_spretus
ENSPMGG00000013112	-	79	91.414	ENSMPUG00000015369	SRSF1	78	89.394	Mustela_putorius_furo
ENSPMGG00000013112	-	85	84.974	ENSMLUG00000023995	-	77	86.631	Myotis_lucifugus
ENSPMGG00000013112	-	79	91.414	ENSMLUG00000011040	SRSF1	78	89.394	Myotis_lucifugus
ENSPMGG00000013112	-	79	91.414	ENSNGAG00000011395	Srsf1	78	89.394	Nannospalax_galili
ENSPMGG00000013112	-	99	73.362	ENSNBRG00000008041	srsf1b	78	82.162	Neolamprologus_brichardi
ENSPMGG00000013112	-	99	85.654	ENSNLEG00000008088	-	95	89.855	Nomascus_leucogenys
ENSPMGG00000013112	-	55	89.764	ENSMEUG00000002783	-	98	85.938	Notamacropus_eugenii
ENSPMGG00000013112	-	57	90.511	ENSOPRG00000001234	-	72	87.591	Ochotona_princeps
ENSPMGG00000013112	-	99	85.654	ENSODEG00000011481	-	88	83.857	Octodon_degus
ENSPMGG00000013112	-	83	88.205	ENSONIG00000004860	-	79	89.062	Oreochromis_niloticus
ENSPMGG00000013112	-	100	96.032	ENSONIG00000013160	-	99	96.032	Oreochromis_niloticus
ENSPMGG00000013112	-	99	62.846	ENSOCUG00000010894	-	75	74.054	Oryctolagus_cuniculus
ENSPMGG00000013112	-	100	97.222	ENSORLG00000004580	srsf1a	100	97.222	Oryzias_latipes
ENSPMGG00000013112	-	100	97.222	ENSORLG00020009456	srsf1a	100	97.222	Oryzias_latipes_hni
ENSPMGG00000013112	-	100	96.825	ENSORLG00015014384	srsf1a	100	96.825	Oryzias_latipes_hsok
ENSPMGG00000013112	-	97	95.279	ENSOMEG00000004106	srsf1a	93	95.279	Oryzias_melastigma
ENSPMGG00000013112	-	83	91.866	ENSOGAG00000025950	-	78	89.394	Otolemur_garnettii
ENSPMGG00000013112	-	82	92.857	ENSOARG00000008323	SRSF1	77	92.857	Ovis_aries
ENSPMGG00000013112	-	99	85.654	ENSPPAG00000043403	-	95	89.855	Pan_paniscus
ENSPMGG00000013112	-	99	85.654	ENSPPRG00000004238	-	93	86.979	Panthera_pardus
ENSPMGG00000013112	-	99	85.654	ENSPTRG00000049077	SRSF1	95	89.855	Pan_troglodytes
ENSPMGG00000013112	-	99	85.654	ENSPANG00000022305	-	95	89.855	Papio_anubis
ENSPMGG00000013112	-	99	65.873	ENSPANG00000030275	-	89	67.123	Papio_anubis
ENSPMGG00000013112	-	82	88.021	ENSPKIG00000012857	srsf1b	78	89.583	Paramormyrops_kingsleyae
ENSPMGG00000013112	-	82	88.021	ENSPKIG00000007204	srsf1a	83	89.062	Paramormyrops_kingsleyae
ENSPMGG00000013112	-	79	83.838	ENSPSIG00000009000	-	78	81.818	Pelodiscus_sinensis
ENSPMGG00000013112	-	96	80.247	ENSPMGG00000005467	-	97	78.632	Periophthalmus_magnuspinnatus
ENSPMGG00000013112	-	99	85.654	ENSPEMG00000021416	Srsf1	88	83.857	Peromyscus_maniculatus_bairdii
ENSPMGG00000013112	-	79	92.432	ENSPCIG00000006076	-	78	89.899	Phascolarctos_cinereus
ENSPMGG00000013112	-	83	84.264	ENSPFOG00000018325	-	69	84.974	Poecilia_formosa
ENSPMGG00000013112	-	86	82.000	ENSPLAG00000008416	srsf1b	78	84.974	Poecilia_latipinna
ENSPMGG00000013112	-	56	93.846	ENSPMEG00000014312	-	99	93.846	Poecilia_mexicana
ENSPMGG00000013112	-	56	93.846	ENSPMEG00000020607	-	99	93.846	Poecilia_mexicana
ENSPMGG00000013112	-	86	82.000	ENSPMEG00000002388	-	78	84.974	Poecilia_mexicana
ENSPMGG00000013112	-	100	96.825	ENSPREG00000009667	srsf1a	100	96.825	Poecilia_reticulata
ENSPMGG00000013112	-	99	85.654	ENSPPYG00000008240	SRSF1	88	83.857	Pongo_abelii
ENSPMGG00000013112	-	79	91.414	ENSPCAG00000005199	SRSF1	78	89.394	Procavia_capensis
ENSPMGG00000013112	-	79	73.500	ENSPCOG00000025736	-	93	72.308	Propithecus_coquereli
ENSPMGG00000013112	-	99	85.654	ENSPCOG00000023654	-	95	89.855	Propithecus_coquereli
ENSPMGG00000013112	-	59	97.143	ENSPVAG00000000519	-	53	97.143	Pteropus_vampyrus
ENSPMGG00000013112	-	95	81.590	ENSPNAG00000022241	srsf1a	78	89.474	Pygocentrus_nattereri
ENSPMGG00000013112	-	82	89.894	ENSPNAG00000014601	srsf1b	78	90.426	Pygocentrus_nattereri
ENSPMGG00000013112	-	79	91.414	ENSRNOG00000050323	Srsf1	78	89.394	Rattus_norvegicus
ENSPMGG00000013112	-	99	85.654	ENSRBIG00000034445	-	95	89.855	Rhinopithecus_bieti
ENSPMGG00000013112	-	99	85.654	ENSRROG00000041506	-	95	89.855	Rhinopithecus_roxellana
ENSPMGG00000013112	-	99	85.654	ENSSBOG00000025377	-	95	89.855	Saimiri_boliviensis_boliviensis
ENSPMGG00000013112	-	79	92.432	ENSSHAG00000002552	-	78	89.899	Sarcophilus_harrisii
ENSPMGG00000013112	-	82	89.005	ENSSFOG00015004800	srsf1a	77	90.052	Scleropages_formosus
ENSPMGG00000013112	-	79	87.000	ENSSMAG00000009719	-	78	86.500	Scophthalmus_maximus
ENSPMGG00000013112	-	83	93.264	ENSSMAG00000007018	-	79	93.264	Scophthalmus_maximus
ENSPMGG00000013112	-	99	74.459	ENSSDUG00000003929	-	83	79.500	Seriola_dumerili
ENSPMGG00000013112	-	100	96.429	ENSSDUG00000011303	-	100	96.429	Seriola_dumerili
ENSPMGG00000013112	-	100	96.429	ENSSLDG00000010543	-	100	96.429	Seriola_lalandi_dorsalis
ENSPMGG00000013112	-	98	70.306	ENSSLDG00000016895	-	77	80.978	Seriola_lalandi_dorsalis
ENSPMGG00000013112	-	82	82.514	ENSSLDG00000016868	-	89	80.751	Seriola_lalandi_dorsalis
ENSPMGG00000013112	-	82	90.104	ENSSARG00000010949	-	62	89.730	Sorex_araneus
ENSPMGG00000013112	-	99	85.232	ENSSPUG00000000804	-	94	87.435	Sphenodon_punctatus
ENSPMGG00000013112	-	100	97.222	ENSSPAG00000022562	-	100	97.222	Stegastes_partitus
ENSPMGG00000013112	-	80	86.528	ENSSPAG00000014152	-	80	85.922	Stegastes_partitus
ENSPMGG00000013112	-	99	85.654	ENSSSCG00000017626	-	88	83.857	Sus_scrofa
ENSPMGG00000013112	-	58	89.855	ENSTGUG00000008416	-	72	86.957	Taeniopygia_guttata
ENSPMGG00000013112	-	100	96.429	ENSTRUG00000003691	srsf1a	100	96.429	Takifugu_rubripes
ENSPMGG00000013112	-	100	96.429	ENSTNIG00000016223	srsf1a	99	96.429	Tetraodon_nigroviridis
ENSPMGG00000013112	-	85	85.787	ENSTBEG00000015378	-	62	87.568	Tupaia_belangeri
ENSPMGG00000013112	-	57	90.511	ENSTTRG00000007310	SRSF1	72	87.591	Tursiops_truncatus
ENSPMGG00000013112	-	79	91.414	ENSUAMG00000009858	SRSF1	78	89.394	Ursus_americanus
ENSPMGG00000013112	-	99	85.654	ENSUMAG00000000455	-	88	83.857	Ursus_maritimus
ENSPMGG00000013112	-	79	90.909	ENSVPAG00000010094	SRSF1	78	88.889	Vicugna_pacos
ENSPMGG00000013112	-	99	85.654	ENSVVUG00000011882	-	88	83.857	Vulpes_vulpes
ENSPMGG00000013112	-	82	89.840	ENSXETG00000008954	srsf1	79	85.849	Xenopus_tropicalis
ENSPMGG00000013112	-	100	96.825	ENSXMAG00000011766	srsf1a	100	96.825	Xiphophorus_maculatus