EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000013298 (Gene tree)
Gene ID: -
Gene Symbol: trmt13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 9652 bases
Position: chrKN463727.1:3005-12656
Accession: ZDB-GENE-050327-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000016201	TRM13	PF05206.14	2e-81	1	1
ENSPMGP00000016203	TRM13	PF05206.14	2.2e-81	1	1
ENSPMGP00000016203	zf-U11-48K	PF05253.12	3.1e-10	1	1
ENSPMGP00000016201	zf-TRM13_CCCH	PF11722.8	9.8e-13	1	1
ENSPMGP00000016203	zf-TRM13_CCCH	PF11722.8	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000017284	-	1326	-	ENSPMGP00000016201	441 (aa)	-	-
ENSPMGT00000017286	-	1386	-	ENSPMGP00000016203	461 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000013298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000013298's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000013298	trmt13	94	51.606	ENSG00000122435	TRMT13	96	54.478	Homo_sapiens
ENSPMGG00000013298	trmt13	94	58.571	ENSAPOG00000015131	trmt13	99	58.571	Acanthochromis_polyacanthus
ENSPMGG00000013298	trmt13	94	52.361	ENSAMEG00000008917	TRMT13	96	52.361	Ailuropoda_melanoleuca
ENSPMGG00000013298	trmt13	96	61.588	ENSACIG00000005804	trmt13	98	59.698	Amphilophus_citrinellus
ENSPMGG00000013298	trmt13	94	59.138	ENSAOCG00000023585	trmt13	99	59.138	Amphiprion_ocellaris
ENSPMGG00000013298	trmt13	94	59.138	ENSAPEG00000004025	trmt13	99	59.138	Amphiprion_percula
ENSPMGG00000013298	trmt13	94	60.600	ENSATEG00000006597	trmt13	99	60.600	Anabas_testudineus
ENSPMGG00000013298	trmt13	85	52.871	ENSAPLG00000014924	TRMT13	99	52.871	Anas_platyrhynchos
ENSPMGG00000013298	trmt13	93	52.070	ENSACAG00000003498	TRMT13	97	52.070	Anolis_carolinensis
ENSPMGG00000013298	trmt13	94	52.034	ENSANAG00000019525	TRMT13	85	64.516	Aotus_nancymaae
ENSPMGG00000013298	trmt13	94	62.389	ENSACLG00000020018	trmt13	99	62.389	Astatotilapia_calliptera
ENSPMGG00000013298	trmt13	95	51.907	ENSAMXG00000017963	trmt13	98	53.219	Astyanax_mexicanus
ENSPMGG00000013298	trmt13	94	51.288	ENSBTAG00000015781	TRMT13	96	51.288	Bos_taurus
ENSPMGG00000013298	trmt13	94	52.155	ENSCJAG00000000200	TRMT13	89	62.595	Callithrix_jacchus
ENSPMGG00000013298	trmt13	65	51.438	ENSCAFG00000020021	TRMT13	98	51.438	Canis_familiaris
ENSPMGG00000013298	trmt13	54	55.598	ENSCAFG00020011572	TRMT13	90	55.598	Canis_lupus_dingo
ENSPMGG00000013298	trmt13	95	51.586	ENSCHIG00000015395	TRMT13	98	51.586	Capra_hircus
ENSPMGG00000013298	trmt13	93	50.000	ENSTSYG00000010811	TRMT13	98	61.616	Carlito_syrichta
ENSPMGG00000013298	trmt13	71	41.049	ENSCAPG00000009085	TRMT13	95	41.056	Cavia_aperea
ENSPMGG00000013298	trmt13	93	50.531	ENSCPOG00000000694	TRMT13	98	50.531	Cavia_porcellus
ENSPMGG00000013298	trmt13	94	52.034	ENSCCAG00000023772	TRMT13	85	64.516	Cebus_capucinus
ENSPMGG00000013298	trmt13	94	52.034	ENSCATG00000033556	TRMT13	85	65.591	Cercocebus_atys
ENSPMGG00000013298	trmt13	85	51.442	ENSCLAG00000008220	TRMT13	99	51.442	Chinchilla_lanigera
ENSPMGG00000013298	trmt13	94	51.820	ENSCSAG00000001506	TRMT13	96	51.820	Chlorocebus_sabaeus
ENSPMGG00000013298	trmt13	96	52.854	ENSCPBG00000026671	TRMT13	98	52.854	Chrysemys_picta_bellii
ENSPMGG00000013298	trmt13	94	51.820	ENSCANG00000034659	TRMT13	85	64.516	Colobus_angolensis_palliatus
ENSPMGG00000013298	trmt13	95	50.743	ENSCGRG00001021601	Trmt13	97	50.743	Cricetulus_griseus_chok1gshd
ENSPMGG00000013298	trmt13	53	49.035	ENSCGRG00000000093	-	99	49.035	Cricetulus_griseus_crigri
ENSPMGG00000013298	trmt13	94	62.955	ENSCSEG00000000591	trmt13	98	62.955	Cynoglossus_semilaevis
ENSPMGG00000013298	trmt13	95	60.897	ENSCVAG00000017342	trmt13	95	60.897	Cyprinodon_variegatus
ENSPMGG00000013298	trmt13	95	53.289	ENSDARG00000102846	trmt13	97	54.788	Danio_rerio
ENSPMGG00000013298	trmt13	56	54.982	ENSDNOG00000001710	TRMT13	82	54.982	Dasypus_novemcinctus
ENSPMGG00000013298	trmt13	94	49.893	ENSDORG00000015808	Trmt13	96	49.893	Dipodomys_ordii
ENSPMGG00000013298	trmt13	95	33.978	FBgn0037435	CG18048	97	33.978	Drosophila_melanogaster
ENSPMGG00000013298	trmt13	93	45.610	ENSETEG00000005819	TRMT13	96	45.610	Echinops_telfairi
ENSPMGG00000013298	trmt13	92	46.275	ENSEBUG00000014444	trmt13	96	46.275	Eptatretus_burgeri
ENSPMGG00000013298	trmt13	93	51.844	ENSEASG00005015918	TRMT13	95	51.844	Equus_asinus_asinus
ENSPMGG00000013298	trmt13	93	51.844	ENSECAG00000022626	TRMT13	95	51.844	Equus_caballus
ENSPMGG00000013298	trmt13	72	55.556	ENSEEUG00000000294	TRMT13	72	55.556	Erinaceus_europaeus
ENSPMGG00000013298	trmt13	94	53.333	ENSELUG00000003803	trmt13	98	53.996	Esox_lucius
ENSPMGG00000013298	trmt13	95	51.266	ENSFCAG00000030618	TRMT13	94	59.804	Felis_catus
ENSPMGG00000013298	trmt13	92	54.889	ENSFALG00000002424	TRMT13	95	54.889	Ficedula_albicollis
ENSPMGG00000013298	trmt13	96	50.105	ENSFDAG00000006342	TRMT13	98	50.105	Fukomys_damarensis
ENSPMGG00000013298	trmt13	79	63.010	ENSFHEG00000022954	trmt13	99	63.092	Fundulus_heteroclitus
ENSPMGG00000013298	trmt13	92	54.610	ENSGMOG00000013223	trmt13	99	54.930	Gadus_morhua
ENSPMGG00000013298	trmt13	93	53.057	ENSGALG00000005290	TRMT13	96	52.723	Gallus_gallus
ENSPMGG00000013298	trmt13	77	60.377	ENSGAFG00000001577	trmt13	82	60.377	Gambusia_affinis
ENSPMGG00000013298	trmt13	95	61.790	ENSGACG00000013428	trmt13	99	62.445	Gasterosteus_aculeatus
ENSPMGG00000013298	trmt13	96	52.532	ENSGAGG00000023303	TRMT13	96	59.091	Gopherus_agassizii
ENSPMGG00000013298	trmt13	94	51.178	ENSGGOG00000005616	TRMT13	85	63.441	Gorilla_gorilla
ENSPMGG00000013298	trmt13	94	62.693	ENSHBUG00000007754	trmt13	99	62.693	Haplochromis_burtoni
ENSPMGG00000013298	trmt13	94	50.749	ENSHGLG00000002164	TRMT13	96	50.749	Heterocephalus_glaber_female
ENSPMGG00000013298	trmt13	94	50.749	ENSHGLG00100001618	TRMT13	96	50.749	Heterocephalus_glaber_male
ENSPMGG00000013298	trmt13	93	58.314	ENSHCOG00000020553	trmt13	98	58.314	Hippocampus_comes
ENSPMGG00000013298	trmt13	93	54.605	ENSIPUG00000024787	trmt13	98	55.088	Ictalurus_punctatus
ENSPMGG00000013298	trmt13	93	51.627	ENSSTOG00000013483	TRMT13	95	51.627	Ictidomys_tridecemlineatus
ENSPMGG00000013298	trmt13	94	51.717	ENSJJAG00000018012	Trmt13	97	51.717	Jaculus_jaculus
ENSPMGG00000013298	trmt13	68	61.238	ENSKMAG00000007639	trmt13	97	61.238	Kryptolebias_marmoratus
ENSPMGG00000013298	trmt13	94	60.991	ENSLBEG00000020238	trmt13	99	60.991	Labrus_bergylta
ENSPMGG00000013298	trmt13	93	52.155	ENSLACG00000013153	TRMT13	98	52.155	Latimeria_chalumnae
ENSPMGG00000013298	trmt13	93	54.486	ENSLOCG00000000418	trmt13	97	54.486	Lepisosteus_oculatus
ENSPMGG00000013298	trmt13	73	53.026	ENSLAFG00000002383	TRMT13	93	53.026	Loxodonta_africana
ENSPMGG00000013298	trmt13	94	51.820	ENSMFAG00000034681	TRMT13	85	64.516	Macaca_fascicularis
ENSPMGG00000013298	trmt13	94	51.820	ENSMMUG00000004243	TRMT13	85	64.516	Macaca_mulatta
ENSPMGG00000013298	trmt13	94	51.820	ENSMNEG00000036102	TRMT13	85	64.516	Macaca_nemestrina
ENSPMGG00000013298	trmt13	94	51.820	ENSMLEG00000034258	TRMT13	85	64.516	Mandrillus_leucophaeus
ENSPMGG00000013298	trmt13	95	61.670	ENSMAMG00000016597	trmt13	98	61.670	Mastacembelus_armatus
ENSPMGG00000013298	trmt13	94	62.168	ENSMZEG00005020959	trmt13	99	62.168	Maylandia_zebra
ENSPMGG00000013298	trmt13	85	53.606	ENSMGAG00000006970	TRMT13	99	53.606	Meleagris_gallopavo
ENSPMGG00000013298	trmt13	93	51.410	ENSMAUG00000010448	Trmt13	96	51.410	Mesocricetus_auratus
ENSPMGG00000013298	trmt13	94	52.083	ENSMICG00000005283	TRMT13	97	59.434	Microcebus_murinus
ENSPMGG00000013298	trmt13	93	50.542	ENSMOCG00000019914	Trmt13	96	50.542	Microtus_ochrogaster
ENSPMGG00000013298	trmt13	53	63.636	ENSMMOG00000007762	trmt13	90	63.636	Mola_mola
ENSPMGG00000013298	trmt13	96	50.526	ENSMODG00000003646	TRMT13	98	50.526	Monodelphis_domestica
ENSPMGG00000013298	trmt13	96	62.693	ENSMALG00000020965	trmt13	99	62.914	Monopterus_albus
ENSPMGG00000013298	trmt13	93	51.183	MGP_CAROLIEiJ_G0025568	Trmt13	76	75.000	Mus_caroli
ENSPMGG00000013298	trmt13	97	50.105	ENSMUSG00000033439	Trmt13	75	75.000	Mus_musculus
ENSPMGG00000013298	trmt13	96	50.743	MGP_PahariEiJ_G0027014	Trmt13	76	75.000	Mus_pahari
ENSPMGG00000013298	trmt13	96	51.059	MGP_SPRETEiJ_G0026518	Trmt13	75	75.000	Mus_spretus
ENSPMGG00000013298	trmt13	73	52.695	ENSMPUG00000002078	-	90	52.695	Mustela_putorius_furo
ENSPMGG00000013298	trmt13	93	50.433	ENSMLUG00000002124	TRMT13	95	50.433	Myotis_lucifugus
ENSPMGG00000013298	trmt13	95	57.778	ENSNBRG00000006783	trmt13	98	58.575	Neolamprologus_brichardi
ENSPMGG00000013298	trmt13	94	51.606	ENSNLEG00000035917	TRMT13	85	64.516	Nomascus_leucogenys
ENSPMGG00000013298	trmt13	63	60.000	ENSOPRG00000012048	TRMT13	62	60.000	Ochotona_princeps
ENSPMGG00000013298	trmt13	94	62.914	ENSONIG00000004574	trmt13	99	62.914	Oreochromis_niloticus
ENSPMGG00000013298	trmt13	86	50.463	ENSOANG00000012057	TRMT13	99	50.463	Ornithorhynchus_anatinus
ENSPMGG00000013298	trmt13	93	52.381	ENSOCUG00000023095	TRMT13	96	52.381	Oryctolagus_cuniculus
ENSPMGG00000013298	trmt13	95	57.174	ENSORLG00000003320	trmt13	100	57.616	Oryzias_latipes
ENSPMGG00000013298	trmt13	93	61.021	ENSORLG00020005972	trmt13	98	61.021	Oryzias_latipes_hni
ENSPMGG00000013298	trmt13	95	61.002	ENSORLG00015002270	trmt13	100	60.907	Oryzias_latipes_hsok
ENSPMGG00000013298	trmt13	93	60.927	ENSOMEG00000006724	trmt13	94	61.488	Oryzias_melastigma
ENSPMGG00000013298	trmt13	93	51.509	ENSOGAG00000005618	TRMT13	94	51.282	Otolemur_garnettii
ENSPMGG00000013298	trmt13	95	51.586	ENSOARG00000017983	TRMT13	98	51.586	Ovis_aries
ENSPMGG00000013298	trmt13	94	51.820	ENSPPAG00000043736	TRMT13	85	64.516	Pan_paniscus
ENSPMGG00000013298	trmt13	95	51.266	ENSPPRG00000003424	TRMT13	94	59.804	Panthera_pardus
ENSPMGG00000013298	trmt13	95	51.266	ENSPTIG00000018598	TRMT13	94	59.804	Panthera_tigris_altaica
ENSPMGG00000013298	trmt13	94	51.606	ENSPTRG00000001001	TRMT13	85	64.516	Pan_troglodytes
ENSPMGG00000013298	trmt13	94	51.820	ENSPANG00000007598	TRMT13	85	64.516	Papio_anubis
ENSPMGG00000013298	trmt13	94	54.286	ENSPKIG00000001514	trmt13	99	54.286	Paramormyrops_kingsleyae
ENSPMGG00000013298	trmt13	84	51.079	ENSPSIG00000012703	TRMT13	99	51.079	Pelodiscus_sinensis
ENSPMGG00000013298	trmt13	94	51.702	ENSPEMG00000000275	Trmt13	97	51.702	Peromyscus_maniculatus_bairdii
ENSPMGG00000013298	trmt13	93	47.579	ENSPMAG00000000823	trmt13	98	47.479	Petromyzon_marinus
ENSPMGG00000013298	trmt13	95	51.363	ENSPCIG00000007699	TRMT13	99	51.782	Phascolarctos_cinereus
ENSPMGG00000013298	trmt13	93	57.494	ENSPFOG00000008675	trmt13	95	57.494	Poecilia_formosa
ENSPMGG00000013298	trmt13	94	57.860	ENSPLAG00000009709	trmt13	100	57.860	Poecilia_latipinna
ENSPMGG00000013298	trmt13	94	56.987	ENSPMEG00000022954	trmt13	100	56.987	Poecilia_mexicana
ENSPMGG00000013298	trmt13	77	61.725	ENSPREG00000005645	trmt13	94	62.455	Poecilia_reticulata
ENSPMGG00000013298	trmt13	93	51.931	ENSPPYG00000001120	TRMT13	96	51.931	Pongo_abelii
ENSPMGG00000013298	trmt13	94	51.404	ENSPCAG00000002340	TRMT13	96	51.404	Procavia_capensis
ENSPMGG00000013298	trmt13	94	52.575	ENSPCOG00000017984	TRMT13	96	52.575	Propithecus_coquereli
ENSPMGG00000013298	trmt13	93	51.293	ENSPVAG00000017430	TRMT13	95	51.293	Pteropus_vampyrus
ENSPMGG00000013298	trmt13	94	61.745	ENSPNYG00000013690	trmt13	99	61.745	Pundamilia_nyererei
ENSPMGG00000013298	trmt13	93	54.367	ENSPNAG00000022130	trmt13	98	54.367	Pygocentrus_nattereri
ENSPMGG00000013298	trmt13	95	51.178	ENSRNOG00000015140	Trmt13	94	51.178	Rattus_norvegicus
ENSPMGG00000013298	trmt13	94	51.820	ENSRBIG00000037686	TRMT13	85	64.516	Rhinopithecus_bieti
ENSPMGG00000013298	trmt13	94	51.820	ENSRROG00000044057	TRMT13	85	64.516	Rhinopithecus_roxellana
ENSPMGG00000013298	trmt13	94	51.606	ENSSBOG00000026541	TRMT13	85	64.516	Saimiri_boliviensis_boliviensis
ENSPMGG00000013298	trmt13	88	51.693	ENSSHAG00000005213	TRMT13	97	51.693	Sarcophilus_harrisii
ENSPMGG00000013298	trmt13	94	56.858	ENSSFOG00015017560	trmt13	98	56.858	Scleropages_formosus
ENSPMGG00000013298	trmt13	94	60.043	ENSSMAG00000014592	trmt13	97	59.914	Scophthalmus_maximus
ENSPMGG00000013298	trmt13	95	62.766	ENSSDUG00000015508	trmt13	98	62.316	Seriola_dumerili
ENSPMGG00000013298	trmt13	95	62.633	ENSSLDG00000019060	trmt13	98	62.633	Seriola_lalandi_dorsalis
ENSPMGG00000013298	trmt13	94	47.899	ENSSARG00000010344	TRMT13	99	47.899	Sorex_araneus
ENSPMGG00000013298	trmt13	92	52.863	ENSSPUG00000016339	TRMT13	98	52.863	Sphenodon_punctatus
ENSPMGG00000013298	trmt13	93	62.445	ENSSPAG00000011922	trmt13	99	61.987	Stegastes_partitus
ENSPMGG00000013298	trmt13	94	51.606	ENSSSCG00000006869	TRMT13	96	51.606	Sus_scrofa
ENSPMGG00000013298	trmt13	93	53.540	ENSTGUG00000005253	TRMT13	98	53.540	Taeniopygia_guttata
ENSPMGG00000013298	trmt13	93	56.223	ENSTRUG00000008400	trmt13	99	55.508	Takifugu_rubripes
ENSPMGG00000013298	trmt13	71	50.000	ENSTBEG00000008911	TRMT13	86	50.000	Tupaia_belangeri
ENSPMGG00000013298	trmt13	94	52.723	ENSUAMG00000017251	TRMT13	96	52.723	Ursus_americanus
ENSPMGG00000013298	trmt13	94	52.146	ENSUMAG00000007901	TRMT13	99	51.620	Ursus_maritimus
ENSPMGG00000013298	trmt13	76	62.222	ENSVPAG00000001034	TRMT13	86	63.158	Vicugna_pacos
ENSPMGG00000013298	trmt13	94	51.288	ENSVVUG00000021996	TRMT13	96	51.288	Vulpes_vulpes
ENSPMGG00000013298	trmt13	93	53.468	ENSXETG00000013204	trmt13	97	53.111	Xenopus_tropicalis
ENSPMGG00000013298	trmt13	94	57.205	ENSXMAG00000010765	trmt13	100	57.205	Xiphophorus_maculatus