EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000013348 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 51141 bases
Position: chrKN468596.1:33278-84418
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000016281	S1	PF00575.23	1.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000017373	-	2895	-	ENSPMGP00000016281	964 (aa)	-	-
ENSPMGT00000017376	-	2409	-	ENSPMGP00000016284	802 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000013348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000013348's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000013348	si:ch211-117n7.8	98	50.806	ENSG00000068784	SRBD1	89	53.231	Homo_sapiens
ENSPMGG00000013348	si:ch211-117n7.8	99	74.771	ENSAPOG00000005103	si:ch211-117n7.8	98	74.873	Acanthochromis_polyacanthus
ENSPMGG00000013348	si:ch211-117n7.8	98	51.279	ENSAMEG00000005993	SRBD1	84	55.778	Ailuropoda_melanoleuca
ENSPMGG00000013348	si:ch211-117n7.8	98	73.077	ENSACIG00000009875	si:ch211-117n7.8	93	75.515	Amphilophus_citrinellus
ENSPMGG00000013348	si:ch211-117n7.8	99	73.926	ENSAOCG00000024718	si:ch211-117n7.8	98	72.393	Amphiprion_ocellaris
ENSPMGG00000013348	si:ch211-117n7.8	99	73.695	ENSAPEG00000002645	si:ch211-117n7.8	99	73.695	Amphiprion_percula
ENSPMGG00000013348	si:ch211-117n7.8	99	72.525	ENSATEG00000010844	si:ch211-117n7.8	98	72.681	Anabas_testudineus
ENSPMGG00000013348	si:ch211-117n7.8	97	52.420	ENSAPLG00000006313	SRBD1	85	56.221	Anas_platyrhynchos
ENSPMGG00000013348	si:ch211-117n7.8	98	51.120	ENSANAG00000025573	SRBD1	87	53.623	Aotus_nancymaae
ENSPMGG00000013348	si:ch211-117n7.8	99	73.926	ENSACLG00000024219	si:ch211-117n7.8	98	73.626	Astatotilapia_calliptera
ENSPMGG00000013348	si:ch211-117n7.8	94	65.514	ENSAMXG00000004294	SRBD1	84	69.376	Astyanax_mexicanus
ENSPMGG00000013348	si:ch211-117n7.8	98	52.214	ENSBTAG00000007508	SRBD1	88	52.311	Bos_taurus
ENSPMGG00000013348	si:ch211-117n7.8	96	52.116	ENSCJAG00000000727	SRBD1	87	53.563	Callithrix_jacchus
ENSPMGG00000013348	si:ch211-117n7.8	98	51.749	ENSCAFG00000002554	SRBD1	90	53.575	Canis_familiaris
ENSPMGG00000013348	si:ch211-117n7.8	98	48.721	ENSCAFG00020026284	SRBD1	97	56.340	Canis_lupus_dingo
ENSPMGG00000013348	si:ch211-117n7.8	98	52.214	ENSCHIG00000016535	SRBD1	88	53.940	Capra_hircus
ENSPMGG00000013348	si:ch211-117n7.8	98	51.745	ENSTSYG00000012797	SRBD1	89	54.221	Carlito_syrichta
ENSPMGG00000013348	si:ch211-117n7.8	99	50.858	ENSCPOG00000004773	SRBD1	84	55.266	Cavia_porcellus
ENSPMGG00000013348	si:ch211-117n7.8	98	51.120	ENSCCAG00000025589	SRBD1	89	53.050	Cebus_capucinus
ENSPMGG00000013348	si:ch211-117n7.8	98	51.332	ENSCATG00000039530	SRBD1	89	53.012	Cercocebus_atys
ENSPMGG00000013348	si:ch211-117n7.8	99	51.457	ENSCLAG00000008623	SRBD1	84	56.220	Chinchilla_lanigera
ENSPMGG00000013348	si:ch211-117n7.8	98	51.643	ENSCSAG00000013350	SRBD1	87	53.735	Chlorocebus_sabaeus
ENSPMGG00000013348	si:ch211-117n7.8	85	79.070	ENSCHOG00000003805	SRBD1	76	79.070	Choloepus_hoffmanni
ENSPMGG00000013348	si:ch211-117n7.8	86	56.890	ENSCPBG00000005677	SRBD1	97	51.735	Chrysemys_picta_bellii
ENSPMGG00000013348	si:ch211-117n7.8	81	40.847	ENSCING00000005950	-	99	40.750	Ciona_intestinalis
ENSPMGG00000013348	si:ch211-117n7.8	82	42.677	ENSCSAVG00000000861	-	99	42.551	Ciona_savignyi
ENSPMGG00000013348	si:ch211-117n7.8	98	51.321	ENSCANG00000016307	SRBD1	87	53.400	Colobus_angolensis_palliatus
ENSPMGG00000013348	si:ch211-117n7.8	99	51.277	ENSCGRG00001000513	Srbd1	84	55.423	Cricetulus_griseus_chok1gshd
ENSPMGG00000013348	si:ch211-117n7.8	99	51.277	ENSCGRG00000002283	Srbd1	84	55.423	Cricetulus_griseus_crigri
ENSPMGG00000013348	si:ch211-117n7.8	99	69.160	ENSCSEG00000000856	si:ch211-117n7.8	97	69.333	Cynoglossus_semilaevis
ENSPMGG00000013348	si:ch211-117n7.8	99	71.545	ENSCVAG00000020212	si:ch211-117n7.8	99	71.897	Cyprinodon_variegatus
ENSPMGG00000013348	si:ch211-117n7.8	98	50.711	ENSDNOG00000018686	SRBD1	89	53.370	Dasypus_novemcinctus
ENSPMGG00000013348	si:ch211-117n7.8	99	50.800	ENSDORG00000010468	Srbd1	90	53.166	Dipodomys_ordii
ENSPMGG00000013348	si:ch211-117n7.8	82	35.642	FBgn0051156	CG31156	79	35.642	Drosophila_melanogaster
ENSPMGG00000013348	si:ch211-117n7.8	88	55.898	ENSETEG00000000739	SRBD1	77	55.839	Echinops_telfairi
ENSPMGG00000013348	si:ch211-117n7.8	75	48.556	ENSEBUG00000008902	si:ch211-117n7.8	95	48.414	Eptatretus_burgeri
ENSPMGG00000013348	si:ch211-117n7.8	98	49.396	ENSEASG00005003132	SRBD1	98	55.263	Equus_asinus_asinus
ENSPMGG00000013348	si:ch211-117n7.8	98	51.429	ENSECAG00000013865	SRBD1	87	53.769	Equus_caballus
ENSPMGG00000013348	si:ch211-117n7.8	98	67.048	ENSELUG00000012592	si:ch211-117n7.8	81	72.162	Esox_lucius
ENSPMGG00000013348	si:ch211-117n7.8	98	51.313	ENSFCAG00000005101	SRBD1	90	53.435	Felis_catus
ENSPMGG00000013348	si:ch211-117n7.8	87	56.890	ENSFALG00000012966	SRBD1	98	52.277	Ficedula_albicollis
ENSPMGG00000013348	si:ch211-117n7.8	99	50.907	ENSFDAG00000016670	SRBD1	90	53.575	Fukomys_damarensis
ENSPMGG00000013348	si:ch211-117n7.8	99	72.362	ENSFHEG00000019480	si:ch211-117n7.8	83	79.157	Fundulus_heteroclitus
ENSPMGG00000013348	si:ch211-117n7.8	52	70.423	ENSGMOG00000018010	-	100	69.249	Gadus_morhua
ENSPMGG00000013348	si:ch211-117n7.8	86	57.177	ENSGALG00000009990	SRBD1	84	56.821	Gallus_gallus
ENSPMGG00000013348	si:ch211-117n7.8	99	72.386	ENSGAFG00000019664	si:ch211-117n7.8	85	78.947	Gambusia_affinis
ENSPMGG00000013348	si:ch211-117n7.8	65	78.471	ENSGACG00000010794	si:ch211-117n7.8	100	78.471	Gasterosteus_aculeatus
ENSPMGG00000013348	si:ch211-117n7.8	86	57.126	ENSGAGG00000006166	SRBD1	99	56.874	Gopherus_agassizii
ENSPMGG00000013348	si:ch211-117n7.8	99	51.357	ENSGGOG00000005910	SRBD1	90	53.855	Gorilla_gorilla
ENSPMGG00000013348	si:ch211-117n7.8	99	63.068	ENSHBUG00000013207	si:ch211-117n7.8	99	62.819	Haplochromis_burtoni
ENSPMGG00000013348	si:ch211-117n7.8	99	50.810	ENSHGLG00000018153	-	84	55.608	Heterocephalus_glaber_female
ENSPMGG00000013348	si:ch211-117n7.8	99	51.163	ENSHGLG00100015183	-	84	55.608	Heterocephalus_glaber_male
ENSPMGG00000013348	si:ch211-117n7.8	95	63.462	ENSIPUG00000009661	srbd1	91	63.865	Ictalurus_punctatus
ENSPMGG00000013348	si:ch211-117n7.8	99	50.955	ENSSTOG00000005898	SRBD1	89	53.761	Ictidomys_tridecemlineatus
ENSPMGG00000013348	si:ch211-117n7.8	99	49.340	ENSJJAG00000022244	Srbd1	80	54.591	Jaculus_jaculus
ENSPMGG00000013348	si:ch211-117n7.8	99	74.040	ENSKMAG00000003473	si:ch211-117n7.8	98	72.783	Kryptolebias_marmoratus
ENSPMGG00000013348	si:ch211-117n7.8	99	73.139	ENSLBEG00000027518	si:ch211-117n7.8	98	72.837	Labrus_bergylta
ENSPMGG00000013348	si:ch211-117n7.8	86	58.216	ENSLACG00000009790	SRBD1	99	57.562	Latimeria_chalumnae
ENSPMGG00000013348	si:ch211-117n7.8	98	61.964	ENSLOCG00000016360	si:ch211-117n7.8	89	63.677	Lepisosteus_oculatus
ENSPMGG00000013348	si:ch211-117n7.8	98	51.537	ENSMFAG00000042026	SRBD1	87	53.735	Macaca_fascicularis
ENSPMGG00000013348	si:ch211-117n7.8	98	51.639	ENSMMUG00000003490	SRBD1	87	53.735	Macaca_mulatta
ENSPMGG00000013348	si:ch211-117n7.8	98	50.205	ENSMNEG00000034701	SRBD1	87	52.285	Macaca_nemestrina
ENSPMGG00000013348	si:ch211-117n7.8	98	51.639	ENSMLEG00000000745	SRBD1	87	54.060	Mandrillus_leucophaeus
ENSPMGG00000013348	si:ch211-117n7.8	99	72.626	ENSMAMG00000021921	si:ch211-117n7.8	98	72.923	Mastacembelus_armatus
ENSPMGG00000013348	si:ch211-117n7.8	99	73.826	ENSMZEG00005027369	si:ch211-117n7.8	98	73.626	Maylandia_zebra
ENSPMGG00000013348	si:ch211-117n7.8	82	55.432	ENSMGAG00000010273	SRBD1	99	54.490	Meleagris_gallopavo
ENSPMGG00000013348	si:ch211-117n7.8	81	56.173	ENSMAUG00000013916	Srbd1	100	53.426	Mesocricetus_auratus
ENSPMGG00000013348	si:ch211-117n7.8	98	52.405	ENSMICG00000007835	SRBD1	89	53.779	Microcebus_murinus
ENSPMGG00000013348	si:ch211-117n7.8	99	50.609	ENSMOCG00000018716	Srbd1	84	54.664	Microtus_ochrogaster
ENSPMGG00000013348	si:ch211-117n7.8	98	71.109	ENSMMOG00000007507	si:ch211-117n7.8	92	75.369	Mola_mola
ENSPMGG00000013348	si:ch211-117n7.8	99	72.177	ENSMALG00000001562	si:ch211-117n7.8	98	71.515	Monopterus_albus
ENSPMGG00000013348	si:ch211-117n7.8	98	51.379	MGP_CAROLIEiJ_G0021934	Srbd1	99	56.352	Mus_caroli
ENSPMGG00000013348	si:ch211-117n7.8	99	52.077	ENSMUSG00000024135	Srbd1	99	54.122	Mus_musculus
ENSPMGG00000013348	si:ch211-117n7.8	99	51.321	MGP_PahariEiJ_G0020924	Srbd1	84	55.464	Mus_pahari
ENSPMGG00000013348	si:ch211-117n7.8	99	51.210	MGP_SPRETEiJ_G0022850	Srbd1	87	53.639	Mus_spretus
ENSPMGG00000013348	si:ch211-117n7.8	98	51.463	ENSMLUG00000007039	SRBD1	89	53.012	Myotis_lucifugus
ENSPMGG00000013348	si:ch211-117n7.8	99	49.468	ENSNGAG00000011893	Srbd1	89	51.795	Nannospalax_galili
ENSPMGG00000013348	si:ch211-117n7.8	99	71.501	ENSNBRG00000012873	si:ch211-117n7.8	100	70.325	Neolamprologus_brichardi
ENSPMGG00000013348	si:ch211-117n7.8	93	53.224	ENSNLEG00000016877	SRBD1	89	52.896	Nomascus_leucogenys
ENSPMGG00000013348	si:ch211-117n7.8	86	55.675	ENSODEG00000012095	SRBD1	85	55.144	Octodon_degus
ENSPMGG00000013348	si:ch211-117n7.8	99	73.626	ENSONIG00000000945	si:ch211-117n7.8	100	79.505	Oreochromis_niloticus
ENSPMGG00000013348	si:ch211-117n7.8	95	52.277	ENSOCUG00000015385	SRBD1	89	53.989	Oryctolagus_cuniculus
ENSPMGG00000013348	si:ch211-117n7.8	99	66.265	ENSORLG00000004427	si:ch211-117n7.8	90	68.920	Oryzias_latipes
ENSPMGG00000013348	si:ch211-117n7.8	99	69.100	ENSORLG00020012792	si:ch211-117n7.8	98	67.768	Oryzias_latipes_hni
ENSPMGG00000013348	si:ch211-117n7.8	99	69.177	ENSORLG00015018598	si:ch211-117n7.8	98	67.638	Oryzias_latipes_hsok
ENSPMGG00000013348	si:ch211-117n7.8	99	69.324	ENSOMEG00000012229	si:ch211-117n7.8	97	73.962	Oryzias_melastigma
ENSPMGG00000013348	si:ch211-117n7.8	99	48.654	ENSOGAG00000001076	SRBD1	89	51.472	Otolemur_garnettii
ENSPMGG00000013348	si:ch211-117n7.8	98	48.617	ENSOARG00000005958	SRBD1	90	50.641	Ovis_aries
ENSPMGG00000013348	si:ch211-117n7.8	98	50.200	ENSPPAG00000038442	SRBD1	89	53.122	Pan_paniscus
ENSPMGG00000013348	si:ch211-117n7.8	98	51.487	ENSPPRG00000003449	SRBD1	90	53.166	Panthera_pardus
ENSPMGG00000013348	si:ch211-117n7.8	98	51.385	ENSPTIG00000012495	SRBD1	90	53.057	Panthera_tigris_altaica
ENSPMGG00000013348	si:ch211-117n7.8	98	50.301	ENSPTRG00000011889	SRBD1	89	53.122	Pan_troglodytes
ENSPMGG00000013348	si:ch211-117n7.8	98	51.537	ENSPANG00000008063	SRBD1	87	53.735	Papio_anubis
ENSPMGG00000013348	si:ch211-117n7.8	99	61.475	ENSPKIG00000021973	si:ch211-117n7.8	85	67.386	Paramormyrops_kingsleyae
ENSPMGG00000013348	si:ch211-117n7.8	86	55.948	ENSPSIG00000008992	SRBD1	84	55.830	Pelodiscus_sinensis
ENSPMGG00000013348	si:ch211-117n7.8	99	49.060	ENSPEMG00000020684	Srbd1	84	53.695	Peromyscus_maniculatus_bairdii
ENSPMGG00000013348	si:ch211-117n7.8	99	72.773	ENSPFOG00000010650	si:ch211-117n7.8	85	79.064	Poecilia_formosa
ENSPMGG00000013348	si:ch211-117n7.8	99	72.700	ENSPLAG00000002141	si:ch211-117n7.8	85	79.181	Poecilia_latipinna
ENSPMGG00000013348	si:ch211-117n7.8	99	72.654	ENSPMEG00000018537	si:ch211-117n7.8	85	79.181	Poecilia_mexicana
ENSPMGG00000013348	si:ch211-117n7.8	99	72.998	ENSPREG00000003258	si:ch211-117n7.8	89	77.221	Poecilia_reticulata
ENSPMGG00000013348	si:ch211-117n7.8	98	47.583	ENSPPYG00000012444	SRBD1	89	49.231	Pongo_abelii
ENSPMGG00000013348	si:ch211-117n7.8	79	50.856	ENSPCAG00000005629	SRBD1	80	50.856	Procavia_capensis
ENSPMGG00000013348	si:ch211-117n7.8	98	44.625	ENSPCOG00000017669	SRBD1	90	45.761	Propithecus_coquereli
ENSPMGG00000013348	si:ch211-117n7.8	75	54.668	ENSPVAG00000001782	SRBD1	73	54.668	Pteropus_vampyrus
ENSPMGG00000013348	si:ch211-117n7.8	99	69.293	ENSPNYG00000000508	si:ch211-117n7.8	100	69.121	Pundamilia_nyererei
ENSPMGG00000013348	si:ch211-117n7.8	97	64.581	ENSPNAG00000013492	SRBD1	86	68.978	Pygocentrus_nattereri
ENSPMGG00000013348	si:ch211-117n7.8	98	50.153	ENSRNOG00000014720	Srbd1	87	52.961	Rattus_norvegicus
ENSPMGG00000013348	si:ch211-117n7.8	98	51.230	ENSRBIG00000033486	SRBD1	87	53.289	Rhinopithecus_bieti
ENSPMGG00000013348	si:ch211-117n7.8	98	51.230	ENSRROG00000041599	SRBD1	87	53.289	Rhinopithecus_roxellana
ENSPMGG00000013348	si:ch211-117n7.8	95	52.456	ENSSBOG00000024982	SRBD1	87	53.512	Saimiri_boliviensis_boliviensis
ENSPMGG00000013348	si:ch211-117n7.8	98	60.714	ENSSFOG00015001128	si:ch211-117n7.8	90	66.110	Scleropages_formosus
ENSPMGG00000013348	si:ch211-117n7.8	99	72.754	ENSSMAG00000018256	si:ch211-117n7.8	98	72.655	Scophthalmus_maximus
ENSPMGG00000013348	si:ch211-117n7.8	97	75.077	ENSSLDG00000023189	si:ch211-117n7.8	92	76.338	Seriola_lalandi_dorsalis
ENSPMGG00000013348	si:ch211-117n7.8	98	47.737	ENSSARG00000009740	SRBD1	90	49.391	Sorex_araneus
ENSPMGG00000013348	si:ch211-117n7.8	87	57.728	ENSSPUG00000010475	SRBD1	94	57.633	Sphenodon_punctatus
ENSPMGG00000013348	si:ch211-117n7.8	95	73.269	ENSSPAG00000008092	-	92	73.144	Stegastes_partitus
ENSPMGG00000013348	si:ch211-117n7.8	98	51.886	ENSSSCG00000008445	SRBD1	88	53.769	Sus_scrofa
ENSPMGG00000013348	si:ch211-117n7.8	86	56.486	ENSTGUG00000003878	SRBD1	99	56.486	Taeniopygia_guttata
ENSPMGG00000013348	si:ch211-117n7.8	99	68.862	ENSTRUG00000007080	si:ch211-117n7.8	95	75.906	Takifugu_rubripes
ENSPMGG00000013348	si:ch211-117n7.8	99	70.437	ENSTNIG00000007464	si:ch211-117n7.8	98	70.268	Tetraodon_nigroviridis
ENSPMGG00000013348	si:ch211-117n7.8	78	78.723	ENSTBEG00000004556	SRBD1	51	78.723	Tupaia_belangeri
ENSPMGG00000013348	si:ch211-117n7.8	91	55.330	ENSTTRG00000011871	SRBD1	79	58.286	Tursiops_truncatus
ENSPMGG00000013348	si:ch211-117n7.8	86	56.501	ENSUAMG00000008126	SRBD1	97	53.986	Ursus_americanus
ENSPMGG00000013348	si:ch211-117n7.8	86	56.501	ENSUMAG00000012902	SRBD1	83	56.147	Ursus_maritimus
ENSPMGG00000013348	si:ch211-117n7.8	91	53.437	ENSVPAG00000006825	SRBD1	96	52.993	Vicugna_pacos
ENSPMGG00000013348	si:ch211-117n7.8	98	51.802	ENSVVUG00000005389	SRBD1	90	53.634	Vulpes_vulpes
ENSPMGG00000013348	si:ch211-117n7.8	98	45.098	ENSXETG00000002760	srbd1	97	45.034	Xenopus_tropicalis
ENSPMGG00000013348	si:ch211-117n7.8	99	72.838	ENSXMAG00000016861	si:ch211-117n7.8	85	79.181	Xiphophorus_maculatus