EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000013359 (Gene tree)
Gene ID: -
Gene Symbol: a1cf
Alias: -
Full Name: apobec1 complementation factor
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 13439 bases
Position: chrKN462429.1:41947-55385
Accession: ZDB-GENE-060824-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000016283	DND1_DSRM	PF14709.7	1.4e-25	1	1
ENSPMGP00000016283	RRM_1	PF00076.22	2.3e-37	1	3
ENSPMGP00000016283	RRM_1	PF00076.22	2.3e-37	2	3
ENSPMGP00000016283	RRM_1	PF00076.22	2.3e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000017375	-	1698	-	ENSPMGP00000016283	565 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000013359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000013359's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000013359	a1cf	99	68.503	ENSG00000148584	A1CF	100	84.080	Homo_sapiens
ENSPMGG00000013359	a1cf	99	75.350	ENSAPOG00000008259	a1cf	89	86.089	Acanthochromis_polyacanthus
ENSPMGG00000013359	a1cf	99	66.895	ENSAMEG00000000523	A1CF	89	70.667	Ailuropoda_melanoleuca
ENSPMGG00000013359	a1cf	99	72.315	ENSACIG00000008632	a1cf	98	71.429	Amphilophus_citrinellus
ENSPMGG00000013359	a1cf	99	74.150	ENSAOCG00000023744	a1cf	91	86.930	Amphiprion_ocellaris
ENSPMGG00000013359	a1cf	99	72.819	ENSAPEG00000009537	a1cf	98	72.391	Amphiprion_percula
ENSPMGG00000013359	a1cf	99	72.850	ENSATEG00000013720	a1cf	98	72.007	Anabas_testudineus
ENSPMGG00000013359	a1cf	99	66.952	ENSAPLG00000002964	A1CF	98	66.207	Anas_platyrhynchos
ENSPMGG00000013359	a1cf	92	70.412	ENSACAG00000015269	A1CF	98	67.304	Anolis_carolinensis
ENSPMGG00000013359	a1cf	99	68.322	ENSANAG00000019974	A1CF	88	72.340	Aotus_nancymaae
ENSPMGG00000013359	a1cf	99	72.959	ENSACLG00000017428	a1cf	98	71.672	Astatotilapia_calliptera
ENSPMGG00000013359	a1cf	99	64.441	ENSAMXG00000018180	a1cf	98	63.591	Astyanax_mexicanus
ENSPMGG00000013359	a1cf	99	68.339	ENSBTAG00000021195	A1CF	96	72.147	Bos_taurus
ENSPMGG00000013359	a1cf	99	67.061	ENSCJAG00000005045	A1CF	88	71.238	Callithrix_jacchus
ENSPMGG00000013359	a1cf	99	66.438	ENSCAFG00000015581	A1CF	98	65.695	Canis_familiaris
ENSPMGG00000013359	a1cf	99	66.438	ENSCAFG00020026421	A1CF	97	78.571	Canis_lupus_dingo
ENSPMGG00000013359	a1cf	99	66.724	ENSCHIG00000020411	A1CF	98	65.306	Capra_hircus
ENSPMGG00000013359	a1cf	93	67.897	ENSTSYG00000001755	A1CF	88	71.694	Carlito_syrichta
ENSPMGG00000013359	a1cf	99	51.590	ENSCAPG00000017386	A1CF	85	52.964	Cavia_aperea
ENSPMGG00000013359	a1cf	99	66.554	ENSCPOG00000009807	A1CF	88	70.476	Cavia_porcellus
ENSPMGG00000013359	a1cf	99	67.174	ENSCCAG00000018168	A1CF	88	71.238	Cebus_capucinus
ENSPMGG00000013359	a1cf	99	68.348	ENSCATG00000043715	A1CF	93	70.420	Cercocebus_atys
ENSPMGG00000013359	a1cf	99	67.121	ENSCLAG00000010424	A1CF	88	70.722	Chinchilla_lanigera
ENSPMGG00000013359	a1cf	99	67.238	ENSCSAG00000007032	A1CF	89	71.048	Chlorocebus_sabaeus
ENSPMGG00000013359	a1cf	94	67.091	ENSCHOG00000009089	A1CF	82	71.253	Choloepus_hoffmanni
ENSPMGG00000013359	a1cf	99	67.973	ENSCPBG00000026464	A1CF	98	66.781	Chrysemys_picta_bellii
ENSPMGG00000013359	a1cf	99	67.410	ENSCANG00000038032	A1CF	89	71.048	Colobus_angolensis_palliatus
ENSPMGG00000013359	a1cf	99	66.893	ENSCGRG00001017413	A1cf	88	70.857	Cricetulus_griseus_chok1gshd
ENSPMGG00000013359	a1cf	89	71.238	ENSCGRG00000017332	A1cf	88	70.857	Cricetulus_griseus_crigri
ENSPMGG00000013359	a1cf	99	69.815	ENSCSEG00000002361	a1cf	98	70.628	Cynoglossus_semilaevis
ENSPMGG00000013359	a1cf	99	71.838	ENSCVAG00000010520	a1cf	98	71.622	Cyprinodon_variegatus
ENSPMGG00000013359	a1cf	99	70.598	ENSDARG00000002968	a1cf	98	71.993	Danio_rerio
ENSPMGG00000013359	a1cf	99	66.667	ENSDNOG00000002829	A1CF	98	65.476	Dasypus_novemcinctus
ENSPMGG00000013359	a1cf	75	83.462	ENSETEG00000012527	A1CF	74	83.462	Echinops_telfairi
ENSPMGG00000013359	a1cf	89	71.619	ENSEASG00005012924	A1CF	88	71.048	Equus_asinus_asinus
ENSPMGG00000013359	a1cf	89	71.429	ENSECAG00000010424	A1CF	88	70.857	Equus_caballus
ENSPMGG00000013359	a1cf	76	62.500	ENSEEUG00000000013	A1CF	96	60.820	Erinaceus_europaeus
ENSPMGG00000013359	a1cf	99	72.184	ENSELUG00000003159	a1cf	98	70.940	Esox_lucius
ENSPMGG00000013359	a1cf	99	68.000	ENSFCAG00000011179	A1CF	88	71.954	Felis_catus
ENSPMGG00000013359	a1cf	99	68.924	ENSFALG00000013183	A1CF	98	67.188	Ficedula_albicollis
ENSPMGG00000013359	a1cf	99	68.096	ENSFDAG00000019371	A1CF	88	71.760	Fukomys_damarensis
ENSPMGG00000013359	a1cf	99	64.587	ENSFHEG00000019652	a1cf	96	84.375	Fundulus_heteroclitus
ENSPMGG00000013359	a1cf	99	68.136	ENSGMOG00000018943	a1cf	98	67.742	Gadus_morhua
ENSPMGG00000013359	a1cf	95	66.607	ENSGALG00000003765	A1CF	95	66.058	Gallus_gallus
ENSPMGG00000013359	a1cf	99	66.610	ENSGAFG00000014868	a1cf	98	66.212	Gambusia_affinis
ENSPMGG00000013359	a1cf	99	69.154	ENSGACG00000010241	a1cf	98	68.677	Gasterosteus_aculeatus
ENSPMGG00000013359	a1cf	93	66.968	ENSGAGG00000016508	A1CF	95	65.699	Gopherus_agassizii
ENSPMGG00000013359	a1cf	99	67.402	ENSGGOG00000009670	A1CF	88	71.048	Gorilla_gorilla
ENSPMGG00000013359	a1cf	99	72.773	ENSHBUG00000021959	a1cf	98	71.212	Haplochromis_burtoni
ENSPMGG00000013359	a1cf	99	67.406	ENSHGLG00000008955	A1CF	88	71.048	Heterocephalus_glaber_female
ENSPMGG00000013359	a1cf	99	66.894	ENSHGLG00100000518	A1CF	88	70.286	Heterocephalus_glaber_male
ENSPMGG00000013359	a1cf	89	70.696	ENSHCOG00000017669	a1cf	98	67.333	Hippocampus_comes
ENSPMGG00000013359	a1cf	89	75.330	ENSIPUG00000010367	a1cf	95	74.765	Ictalurus_punctatus
ENSPMGG00000013359	a1cf	89	76.710	ENSKMAG00000006568	a1cf	98	71.122	Kryptolebias_marmoratus
ENSPMGG00000013359	a1cf	99	70.627	ENSLBEG00000020994	a1cf	98	70.248	Labrus_bergylta
ENSPMGG00000013359	a1cf	99	72.366	ENSLACG00000008061	A1CF	98	71.330	Latimeria_chalumnae
ENSPMGG00000013359	a1cf	99	71.282	ENSLOCG00000006302	a1cf	89	75.283	Lepisosteus_oculatus
ENSPMGG00000013359	a1cf	99	67.235	ENSLAFG00000015462	A1CF	88	71.429	Loxodonta_africana
ENSPMGG00000013359	a1cf	99	68.522	ENSMFAG00000035948	A1CF	93	70.611	Macaca_fascicularis
ENSPMGG00000013359	a1cf	99	68.522	ENSMMUG00000007077	A1CF	88	71.954	Macaca_mulatta
ENSPMGG00000013359	a1cf	99	68.522	ENSMNEG00000031454	A1CF	93	71.048	Macaca_nemestrina
ENSPMGG00000013359	a1cf	99	67.238	ENSMLEG00000037223	A1CF	93	70.420	Mandrillus_leucophaeus
ENSPMGG00000013359	a1cf	99	71.953	ENSMAMG00000010402	a1cf	98	71.164	Mastacembelus_armatus
ENSPMGG00000013359	a1cf	99	72.712	ENSMZEG00005013245	a1cf	98	72.884	Maylandia_zebra
ENSPMGG00000013359	a1cf	99	67.350	ENSMGAG00000001507	A1CF	98	66.437	Meleagris_gallopavo
ENSPMGG00000013359	a1cf	99	66.893	ENSMAUG00000007422	A1cf	88	70.857	Mesocricetus_auratus
ENSPMGG00000013359	a1cf	99	67.637	ENSMICG00000003377	A1CF	98	66.093	Microcebus_murinus
ENSPMGG00000013359	a1cf	99	68.089	ENSMOCG00000021536	A1cf	88	71.619	Microtus_ochrogaster
ENSPMGG00000013359	a1cf	99	65.017	ENSMMOG00000009422	a1cf	86	72.600	Mola_mola
ENSPMGG00000013359	a1cf	89	73.359	ENSMODG00000016478	A1CF	96	72.587	Monodelphis_domestica
ENSPMGG00000013359	a1cf	99	73.721	ENSMALG00000012992	a1cf	98	72.792	Monopterus_albus
ENSPMGG00000013359	a1cf	99	69.031	MGP_CAROLIEiJ_G0022873	A1cf	88	72.340	Mus_caroli
ENSPMGG00000013359	a1cf	99	69.031	ENSMUSG00000052595	A1cf	98	79.630	Mus_musculus
ENSPMGG00000013359	a1cf	99	67.814	MGP_PahariEiJ_G0014366	A1cf	88	71.567	Mus_pahari
ENSPMGG00000013359	a1cf	99	68.576	MGP_SPRETEiJ_G0023792	A1cf	88	72.147	Mus_spretus
ENSPMGG00000013359	a1cf	99	62.093	ENSMPUG00000016971	A1CF	89	65.333	Mustela_putorius_furo
ENSPMGG00000013359	a1cf	89	71.619	ENSMLUG00000016071	A1CF	88	71.048	Myotis_lucifugus
ENSPMGG00000013359	a1cf	99	67.577	ENSNGAG00000015136	A1cf	88	71.048	Nannospalax_galili
ENSPMGG00000013359	a1cf	99	73.109	ENSNBRG00000001712	a1cf	98	71.549	Neolamprologus_brichardi
ENSPMGG00000013359	a1cf	99	67.235	ENSNLEG00000012028	A1CF	88	71.238	Nomascus_leucogenys
ENSPMGG00000013359	a1cf	93	68.066	ENSMEUG00000015909	A1CF	98	66.728	Notamacropus_eugenii
ENSPMGG00000013359	a1cf	89	61.333	ENSOPRG00000010667	A1CF	96	60.762	Ochotona_princeps
ENSPMGG00000013359	a1cf	99	73.232	ENSONIG00000019105	a1cf	98	71.212	Oreochromis_niloticus
ENSPMGG00000013359	a1cf	78	72.444	ENSOANG00000007360	A1CF	97	71.460	Ornithorhynchus_anatinus
ENSPMGG00000013359	a1cf	99	67.876	ENSOCUG00000011587	A1CF	88	71.760	Oryctolagus_cuniculus
ENSPMGG00000013359	a1cf	99	69.500	ENSORLG00000013342	a1cf	98	69.347	Oryzias_latipes
ENSPMGG00000013359	a1cf	99	69.652	ENSORLG00020000586	a1cf	98	69.500	Oryzias_latipes_hni
ENSPMGG00000013359	a1cf	99	69.652	ENSORLG00015018569	a1cf	98	69.500	Oryzias_latipes_hsok
ENSPMGG00000013359	a1cf	99	70.924	ENSOMEG00000013531	a1cf	98	69.580	Oryzias_melastigma
ENSPMGG00000013359	a1cf	99	67.238	ENSOGAG00000012884	A1CF	89	70.476	Otolemur_garnettii
ENSPMGG00000013359	a1cf	99	66.724	ENSOARG00000013695	A1CF	98	65.306	Ovis_aries
ENSPMGG00000013359	a1cf	94	66.726	ENSPPAG00000028115	A1CF	99	72.065	Pan_paniscus
ENSPMGG00000013359	a1cf	99	67.410	ENSPPRG00000012180	A1CF	89	71.238	Panthera_pardus
ENSPMGG00000013359	a1cf	99	67.410	ENSPTIG00000021223	A1CF	89	71.238	Panthera_tigris_altaica
ENSPMGG00000013359	a1cf	99	68.503	ENSPTRG00000002508	A1CF	88	71.954	Pan_troglodytes
ENSPMGG00000013359	a1cf	99	68.522	ENSPANG00000021988	A1CF	93	70.611	Papio_anubis
ENSPMGG00000013359	a1cf	99	71.138	ENSPKIG00000025176	a1cf	98	70.187	Paramormyrops_kingsleyae
ENSPMGG00000013359	a1cf	99	68.924	ENSPSIG00000010318	A1CF	98	67.298	Pelodiscus_sinensis
ENSPMGG00000013359	a1cf	99	67.742	ENSPEMG00000015021	A1cf	88	71.429	Peromyscus_maniculatus_bairdii
ENSPMGG00000013359	a1cf	89	72.973	ENSPCIG00000002175	A1CF	98	67.247	Phascolarctos_cinereus
ENSPMGG00000013359	a1cf	99	69.458	ENSPFOG00000007437	-	98	69.868	Poecilia_formosa
ENSPMGG00000013359	a1cf	99	69.294	ENSPFOG00000006683	a1cf	98	69.702	Poecilia_formosa
ENSPMGG00000013359	a1cf	99	70.383	ENSPLAG00000001210	-	98	70.638	Poecilia_latipinna
ENSPMGG00000013359	a1cf	99	70.383	ENSPLAG00000000026	a1cf	98	70.638	Poecilia_latipinna
ENSPMGG00000013359	a1cf	99	63.184	ENSPMEG00000015529	-	98	63.545	Poecilia_mexicana
ENSPMGG00000013359	a1cf	99	64.202	ENSPMEG00000000921	a1cf	98	64.407	Poecilia_mexicana
ENSPMGG00000013359	a1cf	99	69.371	ENSPREG00000016298	a1cf	98	69.371	Poecilia_reticulata
ENSPMGG00000013359	a1cf	99	68.339	ENSPPYG00000002819	A1CF	88	72.147	Pongo_abelii
ENSPMGG00000013359	a1cf	62	61.983	ENSPCAG00000006463	A1CF	62	60.606	Procavia_capensis
ENSPMGG00000013359	a1cf	99	67.119	ENSPCOG00000024172	A1CF	88	70.857	Propithecus_coquereli
ENSPMGG00000013359	a1cf	99	71.808	ENSPNYG00000017944	a1cf	98	70.432	Pundamilia_nyererei
ENSPMGG00000013359	a1cf	99	71.550	ENSPNAG00000007704	a1cf	98	70.528	Pygocentrus_nattereri
ENSPMGG00000013359	a1cf	99	69.204	ENSRNOG00000033195	A1cf	88	72.727	Rattus_norvegicus
ENSPMGG00000013359	a1cf	99	62.371	ENSRBIG00000042892	A1CF	86	69.284	Rhinopithecus_bieti
ENSPMGG00000013359	a1cf	99	67.410	ENSRROG00000041398	A1CF	89	71.048	Rhinopithecus_roxellana
ENSPMGG00000013359	a1cf	99	66.892	ENSSBOG00000021930	A1CF	88	71.238	Saimiri_boliviensis_boliviensis
ENSPMGG00000013359	a1cf	99	68.675	ENSSHAG00000005096	A1CF	98	67.298	Sarcophilus_harrisii
ENSPMGG00000013359	a1cf	99	72.867	ENSSFOG00015011774	a1cf	96	75.787	Scleropages_formosus
ENSPMGG00000013359	a1cf	99	70.511	ENSSMAG00000013271	a1cf	98	70.432	Scophthalmus_maximus
ENSPMGG00000013359	a1cf	99	73.585	ENSSDUG00000013930	a1cf	98	73.070	Seriola_dumerili
ENSPMGG00000013359	a1cf	99	73.030	ENSSLDG00000004290	a1cf	98	72.855	Seriola_lalandi_dorsalis
ENSPMGG00000013359	a1cf	94	59.745	ENSSARG00000005940	A1CF	83	62.500	Sorex_araneus
ENSPMGG00000013359	a1cf	94	67.145	ENSSPUG00000006797	A1CF	93	66.004	Sphenodon_punctatus
ENSPMGG00000013359	a1cf	89	72.190	ENSSSCG00000010431	A1CF	88	71.619	Sus_scrofa
ENSPMGG00000013359	a1cf	99	67.572	ENSTGUG00000005090	A1CF	98	66.497	Taeniopygia_guttata
ENSPMGG00000013359	a1cf	99	69.687	ENSTRUG00000001982	a1cf	98	69.154	Takifugu_rubripes
ENSPMGG00000013359	a1cf	99	71.122	ENSTNIG00000003580	a1cf	98	70.083	Tetraodon_nigroviridis
ENSPMGG00000013359	a1cf	94	63.934	ENSTTRG00000013190	A1CF	92	61.706	Tursiops_truncatus
ENSPMGG00000013359	a1cf	99	68.000	ENSUAMG00000020065	A1CF	88	71.373	Ursus_americanus
ENSPMGG00000013359	a1cf	99	67.067	ENSUMAG00000011162	A1CF	89	70.667	Ursus_maritimus
ENSPMGG00000013359	a1cf	85	65.209	ENSVPAG00000006130	A1CF	73	69.932	Vicugna_pacos
ENSPMGG00000013359	a1cf	99	68.056	ENSVVUG00000002504	A1CF	96	71.180	Vulpes_vulpes
ENSPMGG00000013359	a1cf	99	63.932	ENSXETG00000006611	a1cf	98	63.590	Xenopus_tropicalis
ENSPMGG00000013359	a1cf	99	71.357	ENSXCOG00000003302	a1cf	98	71.453	Xiphophorus_couchianus
ENSPMGG00000013359	a1cf	99	70.248	ENSXMAG00000016703	a1cf	98	70.333	Xiphophorus_maculatus