EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000013436 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: -
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 7171 bases
Position: chrKN465174.1:225033-232203
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000016373	RRM_1	PF00076.22	2.8e-31	1	2
ENSPMGP00000016373	RRM_1	PF00076.22	2.8e-31	2	2
ENSPMGP00000016375	RRM_1	PF00076.22	5.4e-22	1	1
ENSPMGP00000016368	RRM_1	PF00076.22	2.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000017473	-	405	-	ENSPMGP00000016368	134 (aa)	-	-
ENSPMGT00000017478	-	951	-	ENSPMGP00000016373	316 (aa)	-	-
ENSPMGT00000017480	-	864	-	ENSPMGP00000016375	287 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000013436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000013436's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000013436	srsf4	95	81.102	ENSG00000116350	SRSF4	53	83.333	Homo_sapiens
ENSPMGG00000013436	srsf4	95	71.654	ENSAPOG00000023399	-	70	79.710	Acanthochromis_polyacanthus
ENSPMGG00000013436	srsf4	98	83.969	ENSACIG00000018649	srsf4	93	86.364	Amphilophus_citrinellus
ENSPMGG00000013436	srsf4	95	89.764	ENSAOCG00000005997	srsf4	92	86.127	Amphiprion_ocellaris
ENSPMGG00000013436	srsf4	61	97.561	ENSAPEG00000020870	-	64	97.561	Amphiprion_percula
ENSPMGG00000013436	srsf4	65	54.146	ENSAPEG00000020826	srsf4	75	68.367	Amphiprion_percula
ENSPMGG00000013436	srsf4	93	90.323	ENSATEG00000005680	srsf4	73	85.345	Anabas_testudineus
ENSPMGG00000013436	srsf4	95	73.228	ENSACLG00000021269	-	51	74.346	Astatotilapia_calliptera
ENSPMGG00000013436	srsf4	95	89.147	ENSACLG00000003395	srsf4	69	96.429	Astatotilapia_calliptera
ENSPMGG00000013436	srsf4	95	83.465	ENSAMXG00000034811	srsf4	75	90.789	Astyanax_mexicanus
ENSPMGG00000013436	srsf4	94	56.250	WBGene00004698	rsp-1	99	56.849	Caenorhabditis_elegans
ENSPMGG00000013436	srsf4	95	81.102	ENSCPOG00000036234	SRSF4	53	64.493	Cavia_porcellus
ENSPMGG00000013436	srsf4	94	57.432	ENSCING00000012370	-	68	61.616	Ciona_intestinalis
ENSPMGG00000013436	srsf4	94	55.303	ENSCING00000011362	-	65	57.447	Ciona_intestinalis
ENSPMGG00000013436	srsf4	93	65.672	ENSCING00000024718	-	57	57.653	Ciona_intestinalis
ENSPMGG00000013436	srsf4	94	58.394	ENSCING00000020631	-	80	59.000	Ciona_intestinalis
ENSPMGG00000013436	srsf4	94	61.194	ENSCSAVG00000002581	-	70	62.032	Ciona_savignyi
ENSPMGG00000013436	srsf4	98	90.840	ENSCSEG00000010058	srsf4	78	90.840	Cynoglossus_semilaevis
ENSPMGG00000013436	srsf4	95	81.102	ENSDARG00000105293	srsf4	72	93.421	Danio_rerio
ENSPMGG00000013436	srsf4	95	81.102	ENSDNOG00000047961	SRSF4	51	65.693	Dasypus_novemcinctus
ENSPMGG00000013436	srsf4	94	61.240	FBgn0004587	B52	95	61.538	Drosophila_melanogaster
ENSPMGG00000013436	srsf4	80	57.009	ENSEBUG00000003129	srsf4	69	55.090	Eptatretus_burgeri
ENSPMGG00000013436	srsf4	96	60.465	ENSEBUG00000001681	srsf4	67	57.754	Eptatretus_burgeri
ENSPMGG00000013436	srsf4	100	75.735	ENSELUG00000017551	srsf4	97	76.471	Esox_lucius
ENSPMGG00000013436	srsf4	99	85.294	ENSFALG00000001346	SRSF4	52	64.751	Ficedula_albicollis
ENSPMGG00000013436	srsf4	95	85.827	ENSFHEG00000007472	srsf4	88	96.341	Fundulus_heteroclitus
ENSPMGG00000013436	srsf4	95	79.528	ENSGMOG00000012906	srsf4	57	85.263	Gadus_morhua
ENSPMGG00000013436	srsf4	95	88.281	ENSGAFG00000018496	srsf4	76	68.644	Gambusia_affinis
ENSPMGG00000013436	srsf4	95	80.315	ENSGAGG00000014836	SRSF4	52	66.058	Gopherus_agassizii
ENSPMGG00000013436	srsf4	57	97.368	ENSHBUG00000016897	-	91	86.000	Haplochromis_burtoni
ENSPMGG00000013436	srsf4	95	81.102	ENSHGLG00000011842	SRSF4	52	67.159	Heterocephalus_glaber_female
ENSPMGG00000013436	srsf4	95	81.102	ENSHGLG00100017279	SRSF4	52	67.159	Heterocephalus_glaber_male
ENSPMGG00000013436	srsf4	95	90.551	ENSHCOG00000012540	srsf4	68	90.000	Hippocampus_comes
ENSPMGG00000013436	srsf4	96	87.692	ENSKMAG00000013631	srsf4	82	75.342	Kryptolebias_marmoratus
ENSPMGG00000013436	srsf4	54	98.630	ENSLBEG00000017163	-	70	98.684	Labrus_bergylta
ENSPMGG00000013436	srsf4	95	74.016	ENSLOCG00000001442	-	78	58.804	Lepisosteus_oculatus
ENSPMGG00000013436	srsf4	95	81.102	ENSLAFG00000002575	SRSF4	55	66.920	Loxodonta_africana
ENSPMGG00000013436	srsf4	95	92.969	ENSMAMG00000004888	srsf4	81	82.128	Mastacembelus_armatus
ENSPMGG00000013436	srsf4	57	97.368	ENSMZEG00005025078	-	91	86.139	Maylandia_zebra
ENSPMGG00000013436	srsf4	95	89.147	ENSMZEG00005026275	srsf4	69	96.429	Maylandia_zebra
ENSPMGG00000013436	srsf4	95	81.102	ENSMAUG00000021940	Srsf4	53	66.304	Mesocricetus_auratus
ENSPMGG00000013436	srsf4	95	86.719	ENSMMOG00000013653	srsf4	71	92.754	Mola_mola
ENSPMGG00000013436	srsf4	95	81.102	ENSMODG00000011052	SRSF4	56	77.320	Monodelphis_domestica
ENSPMGG00000013436	srsf4	67	70.000	ENSMALG00000010062	-	81	74.667	Monopterus_albus
ENSPMGG00000013436	srsf4	95	90.625	ENSMALG00000013392	srsf4	78	80.591	Monopterus_albus
ENSPMGG00000013436	srsf4	57	97.368	ENSNBRG00000014840	-	71	97.368	Neolamprologus_brichardi
ENSPMGG00000013436	srsf4	95	62.205	ENSNLEG00000030787	-	62	64.921	Nomascus_leucogenys
ENSPMGG00000013436	srsf4	95	80.315	ENSOPRG00000010098	SRSF4	51	62.642	Ochotona_princeps
ENSPMGG00000013436	srsf4	62	97.590	ENSORLG00000028783	-	75	97.590	Oryzias_latipes
ENSPMGG00000013436	srsf4	95	81.102	ENSORLG00020016052	srsf4	66	87.958	Oryzias_latipes_hni
ENSPMGG00000013436	srsf4	95	81.102	ENSORLG00015007566	srsf4	71	87.958	Oryzias_latipes_hsok
ENSPMGG00000013436	srsf4	95	81.102	ENSOMEG00000005541	srsf4	51	86.528	Oryzias_melastigma
ENSPMGG00000013436	srsf4	59	78.481	ENSOARG00000017944	-	56	42.667	Ovis_aries
ENSPMGG00000013436	srsf4	95	65.354	ENSPMAG00000009397	srsf4	68	68.984	Petromyzon_marinus
ENSPMGG00000013436	srsf4	90	94.118	ENSPLAG00000008812	srsf4	75	68.220	Poecilia_latipinna
ENSPMGG00000013436	srsf4	95	94.118	ENSPMEG00000023638	srsf4	53	87.435	Poecilia_mexicana
ENSPMGG00000013436	srsf4	90	94.118	ENSPREG00000009639	srsf4	61	92.754	Poecilia_reticulata
ENSPMGG00000013436	srsf4	95	83.465	ENSPNYG00000003796	srsf4	56	91.099	Pundamilia_nyererei
ENSPMGG00000013436	srsf4	95	83.465	ENSPNAG00000023844	srsf4	54	81.443	Pygocentrus_nattereri
ENSPMGG00000013436	srsf4	95	85.039	ENSSFOG00015020292	srsf4	72	96.104	Scleropages_formosus
ENSPMGG00000013436	srsf4	95	91.339	ENSSMAG00000001707	srsf4	74	68.841	Scophthalmus_maximus
ENSPMGG00000013436	srsf4	95	89.764	ENSSDUG00000007387	srsf4	83	74.296	Seriola_dumerili
ENSPMGG00000013436	srsf4	95	67.188	ENSSLDG00000009745	srsf4	62	74.346	Seriola_lalandi_dorsalis
ENSPMGG00000013436	srsf4	62	80.723	ENSSPUG00000019124	-	85	84.211	Sphenodon_punctatus
ENSPMGG00000013436	srsf4	97	94.118	ENSSPAG00000014538	srsf4	87	84.091	Stegastes_partitus
ENSPMGG00000013436	srsf4	95	87.402	ENSTRUG00000011891	srsf4	75	83.193	Takifugu_rubripes
ENSPMGG00000013436	srsf4	93	94.118	ENSXCOG00000018826	srsf4	98	84.211	Xiphophorus_couchianus
ENSPMGG00000013436	srsf4	95	68.182	ENSXCOG00000003212	-	55	69.543	Xiphophorus_couchianus
ENSPMGG00000013436	srsf4	61	96.341	ENSXMAG00000021549	-	69	96.341	Xiphophorus_maculatus