EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000013486 (Gene tree)
Gene ID: -
Gene Symbol: lig4
Alias: -
Full Name: ligase IV%2C DNA%2C ATP-dependent
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 3404 bases
Position: chrKN463749.1:13758-17161
Accession: ZDB-GENE-070820-10
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000016417	RNA_ligase	PF09414.10	5.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000017527	-	2742	-	ENSPMGP00000016417	913 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000013486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000013486's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000013486	lig4	99	63.447	ENSG00000174405	LIG4	100	64.379	Homo_sapiens
ENSPMGG00000013486	lig4	100	80.504	ENSAPOG00000000866	lig4	98	80.942	Acanthochromis_polyacanthus
ENSPMGG00000013486	lig4	99	61.572	ENSAMEG00000019685	LIG4	98	62.222	Ailuropoda_melanoleuca
ENSPMGG00000013486	lig4	99	81.298	ENSACIG00000018309	lig4	98	81.971	Amphilophus_citrinellus
ENSPMGG00000013486	lig4	100	80.285	ENSAOCG00000011768	lig4	98	80.942	Amphiprion_ocellaris
ENSPMGG00000013486	lig4	100	80.504	ENSAPEG00000017815	lig4	98	81.166	Amphiprion_percula
ENSPMGG00000013486	lig4	99	80.837	ENSATEG00000005583	lig4	98	81.544	Anabas_testudineus
ENSPMGG00000013486	lig4	96	64.920	ENSAPLG00000001673	LIG4	99	64.920	Anas_platyrhynchos
ENSPMGG00000013486	lig4	99	64.498	ENSACAG00000014566	LIG4	99	65.028	Anolis_carolinensis
ENSPMGG00000013486	lig4	99	62.788	ENSANAG00000012446	LIG4	99	63.222	Aotus_nancymaae
ENSPMGG00000013486	lig4	99	80.418	ENSACLG00000027051	lig4	98	81.187	Astatotilapia_calliptera
ENSPMGG00000013486	lig4	100	74.619	ENSAMXG00000008192	lig4	93	75.531	Astyanax_mexicanus
ENSPMGG00000013486	lig4	99	62.569	ENSBTAG00000015868	LIG4	99	63.000	Bos_taurus
ENSPMGG00000013486	lig4	99	62.239	ENSCJAG00000014689	LIG4	99	62.667	Callithrix_jacchus
ENSPMGG00000013486	lig4	99	62.459	ENSCAFG00000006031	LIG4	99	63.000	Canis_familiaris
ENSPMGG00000013486	lig4	99	62.459	ENSCAFG00020021230	LIG4	99	63.000	Canis_lupus_dingo
ENSPMGG00000013486	lig4	99	62.239	ENSCHIG00000001019	LIG4	99	62.667	Capra_hircus
ENSPMGG00000013486	lig4	98	62.721	ENSCAPG00000006284	LIG4	99	62.778	Cavia_aperea
ENSPMGG00000013486	lig4	99	62.239	ENSCPOG00000014266	LIG4	99	62.667	Cavia_porcellus
ENSPMGG00000013486	lig4	99	62.898	ENSCCAG00000019971	LIG4	99	63.333	Cebus_capucinus
ENSPMGG00000013486	lig4	99	63.117	ENSCATG00000021075	LIG4	99	63.556	Cercocebus_atys
ENSPMGG00000013486	lig4	99	63.557	ENSCLAG00000003376	LIG4	99	64.000	Chinchilla_lanigera
ENSPMGG00000013486	lig4	99	63.008	ENSCSAG00000000211	LIG4	99	63.444	Chlorocebus_sabaeus
ENSPMGG00000013486	lig4	98	66.741	ENSCPBG00000023291	LIG4	98	66.890	Chrysemys_picta_bellii
ENSPMGG00000013486	lig4	71	46.248	ENSCING00000009536	-	94	46.829	Ciona_intestinalis
ENSPMGG00000013486	lig4	83	44.737	ENSCSAVG00000010336	-	98	44.650	Ciona_savignyi
ENSPMGG00000013486	lig4	99	63.008	ENSCANG00000005805	LIG4	99	63.444	Colobus_angolensis_palliatus
ENSPMGG00000013486	lig4	99	61.513	ENSCGRG00001012072	Lig4	99	61.820	Cricetulus_griseus_chok1gshd
ENSPMGG00000013486	lig4	99	61.513	ENSCGRG00000013417	Lig4	99	61.820	Cricetulus_griseus_crigri
ENSPMGG00000013486	lig4	97	77.915	ENSCSEG00000013905	lig4	94	78.760	Cynoglossus_semilaevis
ENSPMGG00000013486	lig4	100	80.416	ENSCVAG00000007896	lig4	98	81.075	Cyprinodon_variegatus
ENSPMGG00000013486	lig4	99	75.000	ENSDARG00000060620	lig4	98	75.476	Danio_rerio
ENSPMGG00000013486	lig4	99	62.500	ENSDNOG00000000513	LIG4	99	62.930	Dasypus_novemcinctus
ENSPMGG00000013486	lig4	99	62.569	ENSDORG00000027303	Lig4	99	62.889	Dipodomys_ordii
ENSPMGG00000013486	lig4	98	61.462	ENSETEG00000015563	LIG4	99	61.709	Echinops_telfairi
ENSPMGG00000013486	lig4	99	45.283	ENSEBUG00000014243	lig4	98	44.941	Eptatretus_burgeri
ENSPMGG00000013486	lig4	99	62.788	ENSEASG00005022073	LIG4	99	63.222	Equus_asinus_asinus
ENSPMGG00000013486	lig4	99	62.473	ENSECAG00000003257	LIG4	99	62.901	Equus_caballus
ENSPMGG00000013486	lig4	98	77.889	ENSELUG00000006787	lig4	98	77.703	Esox_lucius
ENSPMGG00000013486	lig4	98	61.726	ENSFCAG00000031985	LIG4	99	61.778	Felis_catus
ENSPMGG00000013486	lig4	88	67.244	ENSFALG00000004214	LIG4	96	67.929	Ficedula_albicollis
ENSPMGG00000013486	lig4	99	61.910	ENSFDAG00000008973	LIG4	99	62.333	Fukomys_damarensis
ENSPMGG00000013486	lig4	100	80.568	ENSFHEG00000007398	lig4	89	81.006	Fundulus_heteroclitus
ENSPMGG00000013486	lig4	85	74.583	ENSGMOG00000012843	lig4	99	74.194	Gadus_morhua
ENSPMGG00000013486	lig4	99	63.706	ENSGALG00000016854	LIG4	98	64.214	Gallus_gallus
ENSPMGG00000013486	lig4	99	80.371	ENSGAFG00000019779	lig4	94	81.027	Gambusia_affinis
ENSPMGG00000013486	lig4	99	78.060	ENSGACG00000014135	lig4	98	78.412	Gasterosteus_aculeatus
ENSPMGG00000013486	lig4	99	63.227	ENSGGOG00000027771	LIG4	99	63.667	Gorilla_gorilla
ENSPMGG00000013486	lig4	99	80.198	ENSHBUG00000006245	lig4	98	80.963	Haplochromis_burtoni
ENSPMGG00000013486	lig4	99	62.459	ENSHGLG00000000718	LIG4	99	62.889	Heterocephalus_glaber_female
ENSPMGG00000013486	lig4	99	62.459	ENSHGLG00100003265	LIG4	99	62.889	Heterocephalus_glaber_male
ENSPMGG00000013486	lig4	100	77.317	ENSHCOG00000012010	lig4	98	77.629	Hippocampus_comes
ENSPMGG00000013486	lig4	99	73.562	ENSIPUG00000013748	lig4	98	74.020	Ictalurus_punctatus
ENSPMGG00000013486	lig4	99	63.117	ENSSTOG00000024303	LIG4	99	63.556	Ictidomys_tridecemlineatus
ENSPMGG00000013486	lig4	99	61.910	ENSJJAG00000006750	Lig4	99	62.222	Jaculus_jaculus
ENSPMGG00000013486	lig4	100	77.133	ENSKMAG00000001149	lig4	98	77.940	Kryptolebias_marmoratus
ENSPMGG00000013486	lig4	90	80.314	ENSLBEG00000014578	lig4	100	80.314	Labrus_bergylta
ENSPMGG00000013486	lig4	99	66.227	ENSLACG00000003282	LIG4	98	66.741	Latimeria_chalumnae
ENSPMGG00000013486	lig4	99	70.220	ENSLOCG00000008901	lig4	97	70.680	Lepisosteus_oculatus
ENSPMGG00000013486	lig4	99	62.118	ENSLAFG00000031152	LIG4	99	61.530	Loxodonta_africana
ENSPMGG00000013486	lig4	99	63.117	ENSMFAG00000037235	LIG4	99	63.556	Macaca_fascicularis
ENSPMGG00000013486	lig4	99	63.117	ENSMMUG00000008874	LIG4	99	63.556	Macaca_mulatta
ENSPMGG00000013486	lig4	99	63.117	ENSMNEG00000023575	LIG4	99	63.556	Macaca_nemestrina
ENSPMGG00000013486	lig4	99	62.898	ENSMLEG00000026720	LIG4	99	63.333	Mandrillus_leucophaeus
ENSPMGG00000013486	lig4	100	80.437	ENSMAMG00000008472	lig4	98	80.872	Mastacembelus_armatus
ENSPMGG00000013486	lig4	99	80.308	ENSMZEG00005001855	lig4	98	81.075	Maylandia_zebra
ENSPMGG00000013486	lig4	99	63.706	ENSMGAG00000015532	LIG4	98	64.214	Meleagris_gallopavo
ENSPMGG00000013486	lig4	99	60.922	ENSMOCG00000019000	Lig4	99	61.111	Microtus_ochrogaster
ENSPMGG00000013486	lig4	100	79.672	ENSMMOG00000004390	lig4	98	80.313	Mola_mola
ENSPMGG00000013486	lig4	99	63.596	ENSMODG00000025064	LIG4	99	63.596	Monodelphis_domestica
ENSPMGG00000013486	lig4	100	79.563	ENSMALG00000008555	lig4	98	80.201	Monopterus_albus
ENSPMGG00000013486	lig4	99	61.800	MGP_CAROLIEiJ_G0030809	Lig4	99	62.000	Mus_caroli
ENSPMGG00000013486	lig4	99	61.690	ENSMUSG00000049717	Lig4	99	61.889	Mus_musculus
ENSPMGG00000013486	lig4	99	61.800	MGP_PahariEiJ_G0021270	Lig4	99	62.000	Mus_pahari
ENSPMGG00000013486	lig4	99	61.910	MGP_SPRETEiJ_G0031917	Lig4	99	62.111	Mus_spretus
ENSPMGG00000013486	lig4	99	61.690	ENSMPUG00000018675	LIG4	99	62.000	Mustela_putorius_furo
ENSPMGG00000013486	lig4	99	62.459	ENSMLUG00000001267	LIG4	99	62.889	Myotis_lucifugus
ENSPMGG00000013486	lig4	99	62.239	ENSNGAG00000013258	Lig4	99	62.667	Nannospalax_galili
ENSPMGG00000013486	lig4	99	80.308	ENSNBRG00000021252	lig4	98	81.075	Neolamprologus_brichardi
ENSPMGG00000013486	lig4	99	62.898	ENSNLEG00000007888	LIG4	99	63.333	Nomascus_leucogenys
ENSPMGG00000013486	lig4	99	61.251	ENSOPRG00000005765	LIG4	99	61.667	Ochotona_princeps
ENSPMGG00000013486	lig4	99	62.239	ENSODEG00000019683	LIG4	99	62.667	Octodon_degus
ENSPMGG00000013486	lig4	99	80.858	ENSONIG00000011969	lig4	97	81.635	Oreochromis_niloticus
ENSPMGG00000013486	lig4	99	62.171	ENSOCUG00000015734	LIG4	99	62.444	Oryctolagus_cuniculus
ENSPMGG00000013486	lig4	99	78.705	ENSORLG00000004041	lig4	98	79.665	Oryzias_latipes
ENSPMGG00000013486	lig4	99	78.798	ENSORLG00020019607	lig4	98	79.665	Oryzias_latipes_hni
ENSPMGG00000013486	lig4	99	78.705	ENSORLG00015017754	lig4	98	79.665	Oryzias_latipes_hsok
ENSPMGG00000013486	lig4	75	85.320	ENSOMEG00000003459	lig4	97	86.161	Oryzias_melastigma
ENSPMGG00000013486	lig4	99	62.829	ENSOGAG00000032120	LIG4	98	63.333	Otolemur_garnettii
ENSPMGG00000013486	lig4	81	66.935	ENSOARG00000005590	LIG4	97	67.531	Ovis_aries
ENSPMGG00000013486	lig4	99	63.117	ENSPPAG00000032998	LIG4	99	63.556	Pan_paniscus
ENSPMGG00000013486	lig4	98	62.168	ENSPPRG00000017804	LIG4	99	62.222	Panthera_pardus
ENSPMGG00000013486	lig4	98	62.058	ENSPTIG00000010051	LIG4	99	62.111	Panthera_tigris_altaica
ENSPMGG00000013486	lig4	99	63.227	ENSPTRG00000006025	LIG4	99	63.667	Pan_troglodytes
ENSPMGG00000013486	lig4	99	63.227	ENSPANG00000007562	LIG4	99	63.667	Papio_anubis
ENSPMGG00000013486	lig4	99	73.591	ENSPKIG00000011645	lig4	97	73.908	Paramormyrops_kingsleyae
ENSPMGG00000013486	lig4	99	66.300	ENSPSIG00000001504	LIG4	98	66.592	Pelodiscus_sinensis
ENSPMGG00000013486	lig4	99	60.526	ENSPEMG00000000076	Lig4	99	60.821	Peromyscus_maniculatus_bairdii
ENSPMGG00000013486	lig4	99	62.500	ENSPCIG00000021882	LIG4	99	62.597	Phascolarctos_cinereus
ENSPMGG00000013486	lig4	100	81.066	ENSPFOG00000000797	lig4	98	81.737	Poecilia_formosa
ENSPMGG00000013486	lig4	100	81.066	ENSPLAG00000001196	lig4	98	81.737	Poecilia_latipinna
ENSPMGG00000013486	lig4	100	80.958	ENSPMEG00000021353	lig4	98	81.626	Poecilia_mexicana
ENSPMGG00000013486	lig4	100	80.522	ENSPREG00000007323	lig4	98	81.180	Poecilia_reticulata
ENSPMGG00000013486	lig4	99	63.008	ENSPPYG00000005540	LIG4	99	63.444	Pongo_abelii
ENSPMGG00000013486	lig4	99	61.910	ENSPVAG00000016403	LIG4	99	62.333	Pteropus_vampyrus
ENSPMGG00000013486	lig4	99	80.308	ENSPNYG00000009660	lig4	98	81.187	Pundamilia_nyererei
ENSPMGG00000013486	lig4	98	76.477	ENSPNAG00000028056	lig4	99	76.372	Pygocentrus_nattereri
ENSPMGG00000013486	lig4	98	76.477	ENSPNAG00000028069	LIG4	99	76.372	Pygocentrus_nattereri
ENSPMGG00000013486	lig4	99	61.361	ENSRNOG00000014605	Lig4	99	61.444	Rattus_norvegicus
ENSPMGG00000013486	lig4	99	62.349	ENSRBIG00000039962	LIG4	99	62.778	Rhinopithecus_bieti
ENSPMGG00000013486	lig4	99	63.337	ENSRROG00000006040	LIG4	99	63.778	Rhinopithecus_roxellana
ENSPMGG00000013486	lig4	99	62.569	ENSSBOG00000019029	LIG4	99	63.000	Saimiri_boliviensis_boliviensis
ENSPMGG00000013486	lig4	99	60.417	ENSSHAG00000009525	LIG4	99	60.377	Sarcophilus_harrisii
ENSPMGG00000013486	lig4	99	73.400	ENSSFOG00015012835	lig4	98	73.684	Scleropages_formosus
ENSPMGG00000013486	lig4	100	76.232	ENSSMAG00000011267	lig4	98	76.906	Scophthalmus_maximus
ENSPMGG00000013486	lig4	100	79.108	ENSSDUG00000010343	lig4	98	79.955	Seriola_dumerili
ENSPMGG00000013486	lig4	100	78.237	ENSSLDG00000003239	lig4	98	78.842	Seriola_lalandi_dorsalis
ENSPMGG00000013486	lig4	99	62.623	ENSSARG00000006573	LIG4	99	62.942	Sorex_araneus
ENSPMGG00000013486	lig4	92	66.944	ENSSPUG00000002444	LIG4	100	66.944	Sphenodon_punctatus
ENSPMGG00000013486	lig4	100	81.093	ENSSPAG00000001609	lig4	98	81.655	Stegastes_partitus
ENSPMGG00000013486	lig4	99	63.187	ENSSSCG00000009540	LIG4	99	63.515	Sus_scrofa
ENSPMGG00000013486	lig4	99	64.459	ENSTGUG00000010795	LIG4	99	64.844	Taeniopygia_guttata
ENSPMGG00000013486	lig4	100	78.470	ENSTRUG00000009984	lig4	98	78.971	Takifugu_rubripes
ENSPMGG00000013486	lig4	100	77.875	ENSTNIG00000010348	lig4	98	78.475	Tetraodon_nigroviridis
ENSPMGG00000013486	lig4	99	62.678	ENSTBEG00000017741	LIG4	99	63.111	Tupaia_belangeri
ENSPMGG00000013486	lig4	99	61.581	ENSTTRG00000012660	LIG4	99	62.000	Tursiops_truncatus
ENSPMGG00000013486	lig4	99	61.690	ENSUAMG00000003773	LIG4	99	62.000	Ursus_americanus
ENSPMGG00000013486	lig4	99	63.567	ENSXETG00000002654	lig4	98	64.143	Xenopus_tropicalis
ENSPMGG00000013486	lig4	98	81.180	ENSXCOG00000017401	lig4	98	81.180	Xiphophorus_couchianus
ENSPMGG00000013486	lig4	98	81.180	ENSXMAG00000015142	lig4	98	81.180	Xiphophorus_maculatus