EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000013927 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: -
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 6354 bases
Position: chrKN463945.1:327704-334057
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000017002	RRM_1	PF00076.22	3.1e-16	1	1
ENSPMGP00000017004	RRM_1	PF00076.22	5.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000018151	PABPN1L-201	513	-	ENSPMGP00000017002	170 (aa)	-	-
ENSPMGT00000018153	PABPN1L-202	669	-	ENSPMGP00000017004	222 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000013927's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000013927's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000013927	PABPN1L	94	88.679	ENSAPOG00000000685	PABPN1L	69	88.263	Acanthochromis_polyacanthus
ENSPMGG00000013927	PABPN1L	90	87.437	ENSACIG00000021400	PABPN1L	84	88.776	Amphilophus_citrinellus
ENSPMGG00000013927	PABPN1L	94	88.263	ENSAOCG00000019844	PABPN1L	81	88.263	Amphiprion_ocellaris
ENSPMGG00000013927	PABPN1L	94	87.793	ENSAPEG00000019534	PABPN1L	81	87.793	Amphiprion_percula
ENSPMGG00000013927	PABPN1L	94	87.264	ENSATEG00000011646	PABPN1L	85	86.854	Anabas_testudineus
ENSPMGG00000013927	PABPN1L	51	57.391	ENSAPLG00000009174	PABPN1L	86	58.824	Anas_platyrhynchos
ENSPMGG00000013927	PABPN1L	69	66.949	ENSACAG00000013250	PABPN1L	64	66.393	Anolis_carolinensis
ENSPMGG00000013927	PABPN1L	72	60.976	ENSANAG00000038178	PABPN1L	54	58.710	Aotus_nancymaae
ENSPMGG00000013927	PABPN1L	94	87.324	ENSACLG00000025147	PABPN1L	82	87.324	Astatotilapia_calliptera
ENSPMGG00000013927	PABPN1L	63	63.551	ENSBTAG00000006727	-	84	57.857	Bos_taurus
ENSPMGG00000013927	PABPN1L	71	61.417	ENSCJAG00000045284	PABPN1L	53	58.065	Callithrix_jacchus
ENSPMGG00000013927	PABPN1L	60	65.686	ENSCPOG00000025951	PABPN1L	50	54.225	Cavia_porcellus
ENSPMGG00000013927	PABPN1L	74	61.719	ENSCCAG00000027631	PABPN1L	54	58.974	Cebus_capucinus
ENSPMGG00000013927	PABPN1L	85	53.797	ENSCATG00000031060	PABPN1L	57	53.797	Cercocebus_atys
ENSPMGG00000013927	PABPN1L	61	66.346	ENSCLAG00000000704	PABPN1L	50	54.861	Chinchilla_lanigera
ENSPMGG00000013927	PABPN1L	73	57.895	ENSCGRG00001013211	Pabpn1l	51	56.835	Cricetulus_griseus_chok1gshd
ENSPMGG00000013927	PABPN1L	73	57.895	ENSCGRG00000015868	Pabpn1l	51	56.835	Cricetulus_griseus_crigri
ENSPMGG00000013927	PABPN1L	97	82.273	ENSCSEG00000001142	pabpn1l	81	84.360	Cynoglossus_semilaevis
ENSPMGG00000013927	PABPN1L	91	86.473	ENSCVAG00000015547	PABPN1L	81	85.446	Cyprinodon_variegatus
ENSPMGG00000013927	PABPN1L	94	68.075	ENSELUG00000018385	PABPN1L	82	69.014	Esox_lucius
ENSPMGG00000013927	PABPN1L	59	71.287	ENSFALG00000003319	PABPN1L	51	62.295	Ficedula_albicollis
ENSPMGG00000013927	PABPN1L	62	66.981	ENSFDAG00000021067	PABPN1L	51	54.730	Fukomys_damarensis
ENSPMGG00000013927	PABPN1L	94	85.915	ENSFHEG00000018295	PABPN1L	81	85.915	Fundulus_heteroclitus
ENSPMGG00000013927	PABPN1L	94	75.000	ENSGMOG00000001475	PABPN1L	81	76.389	Gadus_morhua
ENSPMGG00000013927	PABPN1L	67	66.667	ENSGALG00000006242	PABPN1L	74	60.741	Gallus_gallus
ENSPMGG00000013927	PABPN1L	91	85.990	ENSGAFG00000012565	PABPN1L	81	84.977	Gambusia_affinis
ENSPMGG00000013927	PABPN1L	96	83.258	ENSGACG00000015428	PABPN1L	81	84.186	Gasterosteus_aculeatus
ENSPMGG00000013927	PABPN1L	94	87.324	ENSHBUG00000002388	PABPN1L	81	87.324	Haplochromis_burtoni
ENSPMGG00000013927	PABPN1L	95	83.645	ENSHCOG00000004151	PABPN1L	79	84.038	Hippocampus_comes
ENSPMGG00000013927	PABPN1L	83	68.085	ENSIPUG00000023583	PABPN1L	69	75.000	Ictalurus_punctatus
ENSPMGG00000013927	PABPN1L	74	53.901	ENSJJAG00000006433	Pabpn1l	55	52.229	Jaculus_jaculus
ENSPMGG00000013927	PABPN1L	95	82.326	ENSKMAG00000001112	PABPN1L	93	83.886	Kryptolebias_marmoratus
ENSPMGG00000013927	PABPN1L	95	83.333	ENSLBEG00000011647	PABPN1L	78	88.837	Labrus_bergylta
ENSPMGG00000013927	PABPN1L	76	56.429	ENSLAFG00000025902	-	55	56.429	Loxodonta_africana
ENSPMGG00000013927	PABPN1L	94	87.324	ENSMZEG00005002186	PABPN1L	82	87.324	Maylandia_zebra
ENSPMGG00000013927	PABPN1L	59	65.000	ENSMAUG00000014032	Pabpn1l	51	55.970	Mesocricetus_auratus
ENSPMGG00000013927	PABPN1L	73	59.259	ENSMICG00000028179	PABPN1L	51	59.859	Microcebus_murinus
ENSPMGG00000013927	PABPN1L	91	86.275	ENSMMOG00000017714	PABPN1L	88	86.275	Mola_mola
ENSPMGG00000013927	PABPN1L	93	83.412	ENSMALG00000016926	PABPN1L	81	83.412	Monopterus_albus
ENSPMGG00000013927	PABPN1L	65	62.162	ENSNGAG00000023992	Pabpn1l	50	57.353	Nannospalax_galili
ENSPMGG00000013927	PABPN1L	94	87.324	ENSNBRG00000017078	PABPN1L	90	87.324	Neolamprologus_brichardi
ENSPMGG00000013927	PABPN1L	100	79.556	ENSORLG00000026560	PABPN1L	81	80.189	Oryzias_latipes
ENSPMGG00000013927	PABPN1L	100	79.556	ENSORLG00020015068	PABPN1L	81	80.189	Oryzias_latipes_hni
ENSPMGG00000013927	PABPN1L	100	79.556	ENSORLG00015000397	PABPN1L	81	80.189	Oryzias_latipes_hsok
ENSPMGG00000013927	PABPN1L	100	78.027	ENSOMEG00000017896	PABPN1L	58	79.048	Oryzias_melastigma
ENSPMGG00000013927	PABPN1L	64	64.220	ENSPTIG00000015606	PABPN1L	50	61.417	Panthera_tigris_altaica
ENSPMGG00000013927	PABPN1L	58	75.510	ENSPSIG00000003404	PABPN1L	55	73.333	Pelodiscus_sinensis
ENSPMGG00000013927	PABPN1L	67	64.035	ENSPCIG00000007038	-	80	64.407	Phascolarctos_cinereus
ENSPMGG00000013927	PABPN1L	91	85.990	ENSPFOG00000007001	PABPN1L	81	84.977	Poecilia_formosa
ENSPMGG00000013927	PABPN1L	91	85.990	ENSPLAG00000018431	PABPN1L	81	84.977	Poecilia_latipinna
ENSPMGG00000013927	PABPN1L	81	79.891	ENSPMEG00000000169	-	91	79.891	Poecilia_mexicana
ENSPMGG00000013927	PABPN1L	91	85.990	ENSPMEG00000009108	PABPN1L	81	84.977	Poecilia_mexicana
ENSPMGG00000013927	PABPN1L	96	84.793	ENSPREG00000022533	PABPN1L	92	84.977	Poecilia_reticulata
ENSPMGG00000013927	PABPN1L	86	54.667	ENSPPYG00000007655	PABPN1L	52	54.667	Pongo_abelii
ENSPMGG00000013927	PABPN1L	59	68.317	ENSPCOG00000024077	PABPN1L	52	58.553	Propithecus_coquereli
ENSPMGG00000013927	PABPN1L	94	87.324	ENSPNYG00000004803	PABPN1L	82	87.324	Pundamilia_nyererei
ENSPMGG00000013927	PABPN1L	94	84.404	ENSSMAG00000021348	PABPN1L	82	85.780	Scophthalmus_maximus
ENSPMGG00000013927	PABPN1L	94	86.854	ENSSDUG00000006986	PABPN1L	81	86.854	Seriola_dumerili
ENSPMGG00000013927	PABPN1L	94	86.854	ENSSLDG00000021845	PABPN1L	81	86.854	Seriola_lalandi_dorsalis
ENSPMGG00000013927	PABPN1L	71	56.693	ENSSARG00000005178	-	54	56.693	Sorex_araneus
ENSPMGG00000013927	PABPN1L	60	70.588	ENSSPUG00000007031	PABPN1L	56	65.289	Sphenodon_punctatus
ENSPMGG00000013927	PABPN1L	95	86.977	ENSSPAG00000017978	PABPN1L	81	87.324	Stegastes_partitus
ENSPMGG00000013927	PABPN1L	64	64.815	ENSSSCG00000036367	PABPN1L	52	55.921	Sus_scrofa
ENSPMGG00000013927	PABPN1L	96	74.194	ENSTRUG00000024725	PABPN1L	79	74.648	Takifugu_rubripes
ENSPMGG00000013927	PABPN1L	86	89.583	ENSTNIG00000009416	PABPN1L	100	89.583	Tetraodon_nigroviridis
ENSPMGG00000013927	PABPN1L	59	68.000	ENSXETG00000011258	pabpn1l	59	63.077	Xenopus_tropicalis
ENSPMGG00000013927	PABPN1L	91	85.507	ENSXCOG00000003254	PABPN1L	92	84.507	Xiphophorus_couchianus
ENSPMGG00000013927	PABPN1L	94	83.732	ENSXMAG00000029090	PABPN1L	94	83.732	Xiphophorus_maculatus