EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000014002 (Gene tree)
Gene ID: -
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 2084 bases
Position: chrKN462278.1:14811-16894
Accession: ZDB-GENE-080926-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000017088	EXOSC1	PF10447.9	6.6e-13	1	1
ENSPMGP00000017088	ECR1_N	PF14382.6	2.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000018244	-	510	-	ENSPMGP00000017088	169 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000014002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000014002's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000014002	exosc1	98	77.108	ENSG00000171311	EXOSC1	98	77.108	Homo_sapiens
ENSPMGG00000014002	exosc1	100	84.021	ENSAPOG00000007822	exosc1	100	84.021	Acanthochromis_polyacanthus
ENSPMGG00000014002	exosc1	98	68.586	ENSAMEG00000000129	EXOSC1	98	68.586	Ailuropoda_melanoleuca
ENSPMGG00000014002	exosc1	95	82.703	ENSACIG00000018956	exosc1	91	82.703	Amphilophus_citrinellus
ENSPMGG00000014002	exosc1	100	84.021	ENSAOCG00000010699	exosc1	100	84.021	Amphiprion_ocellaris
ENSPMGG00000014002	exosc1	92	71.111	ENSAPEG00000012690	exosc1	97	71.111	Amphiprion_percula
ENSPMGG00000014002	exosc1	100	83.505	ENSATEG00000018683	exosc1	100	83.505	Anabas_testudineus
ENSPMGG00000014002	exosc1	96	66.845	ENSACAG00000002101	EXOSC1	96	66.845	Anolis_carolinensis
ENSPMGG00000014002	exosc1	98	77.711	ENSANAG00000034669	EXOSC1	98	77.711	Aotus_nancymaae
ENSPMGG00000014002	exosc1	100	84.021	ENSACLG00000021243	exosc1	100	84.021	Astatotilapia_calliptera
ENSPMGG00000014002	exosc1	100	80.412	ENSAMXG00000011116	exosc1	100	80.412	Astyanax_mexicanus
ENSPMGG00000014002	exosc1	98	68.586	ENSBTAG00000012699	EXOSC1	98	68.586	Bos_taurus
ENSPMGG00000014002	exosc1	98	77.108	ENSCJAG00000016586	EXOSC1	98	77.108	Callithrix_jacchus
ENSPMGG00000014002	exosc1	98	68.586	ENSCAFG00000009068	EXOSC1	92	68.586	Canis_familiaris
ENSPMGG00000014002	exosc1	98	68.586	ENSCAFG00020006002	EXOSC1	92	68.586	Canis_lupus_dingo
ENSPMGG00000014002	exosc1	98	68.586	ENSCHIG00000015253	EXOSC1	98	68.586	Capra_hircus
ENSPMGG00000014002	exosc1	98	77.108	ENSTSYG00000000760	EXOSC1	98	77.108	Carlito_syrichta
ENSPMGG00000014002	exosc1	98	68.586	ENSCPOG00000001173	EXOSC1	98	68.586	Cavia_porcellus
ENSPMGG00000014002	exosc1	98	44.578	ENSCCAG00000023986	EXOSC1	97	44.578	Cebus_capucinus
ENSPMGG00000014002	exosc1	98	77.108	ENSCATG00000034114	EXOSC1	98	77.108	Cercocebus_atys
ENSPMGG00000014002	exosc1	98	68.586	ENSCLAG00000002463	EXOSC1	98	68.586	Chinchilla_lanigera
ENSPMGG00000014002	exosc1	98	66.492	ENSCSAG00000005870	EXOSC1	98	66.492	Chlorocebus_sabaeus
ENSPMGG00000014002	exosc1	94	66.848	ENSCHOG00000006477	EXOSC1	98	66.848	Choloepus_hoffmanni
ENSPMGG00000014002	exosc1	99	45.078	ENSCING00000022734	-	92	45.078	Ciona_intestinalis
ENSPMGG00000014002	exosc1	99	48.187	ENSCSAVG00000010865	-	98	48.187	Ciona_savignyi
ENSPMGG00000014002	exosc1	98	77.108	ENSCANG00000034159	EXOSC1	98	77.108	Colobus_angolensis_palliatus
ENSPMGG00000014002	exosc1	98	68.063	ENSCGRG00001000335	Exosc1	98	68.063	Cricetulus_griseus_chok1gshd
ENSPMGG00000014002	exosc1	98	68.063	ENSCGRG00000011602	Exosc1	98	68.063	Cricetulus_griseus_crigri
ENSPMGG00000014002	exosc1	100	94.675	ENSCSEG00000007895	exosc1	97	94.675	Cynoglossus_semilaevis
ENSPMGG00000014002	exosc1	100	76.289	ENSCVAG00000016748	exosc1	100	76.289	Cyprinodon_variegatus
ENSPMGG00000014002	exosc1	100	80.412	ENSDARG00000059841	exosc1	100	80.412	Danio_rerio
ENSPMGG00000014002	exosc1	70	62.069	ENSDNOG00000007983	EXOSC1	98	62.069	Dasypus_novemcinctus
ENSPMGG00000014002	exosc1	98	68.063	ENSDORG00000016528	Exosc1	98	68.063	Dipodomys_ordii
ENSPMGG00000014002	exosc1	95	44.211	FBgn0032346	Csl4	92	44.211	Drosophila_melanogaster
ENSPMGG00000014002	exosc1	98	68.586	ENSETEG00000002469	-	98	68.586	Echinops_telfairi
ENSPMGG00000014002	exosc1	97	58.854	ENSEBUG00000008164	exosc1	96	58.854	Eptatretus_burgeri
ENSPMGG00000014002	exosc1	98	70.652	ENSEASG00005008684	EXOSC1	98	70.652	Equus_asinus_asinus
ENSPMGG00000014002	exosc1	54	55.046	ENSECAG00000010621	EXOSC1	69	55.046	Equus_caballus
ENSPMGG00000014002	exosc1	98	68.586	ENSEEUG00000005647	EXOSC1	98	68.586	Erinaceus_europaeus
ENSPMGG00000014002	exosc1	100	86.550	ENSELUG00000017369	exosc1	99	86.550	Esox_lucius
ENSPMGG00000014002	exosc1	98	77.711	ENSFCAG00000040563	EXOSC1	98	77.711	Felis_catus
ENSPMGG00000014002	exosc1	98	67.016	ENSFALG00000008450	EXOSC1	98	67.016	Ficedula_albicollis
ENSPMGG00000014002	exosc1	98	69.110	ENSFDAG00000000846	EXOSC1	98	69.110	Fukomys_damarensis
ENSPMGG00000014002	exosc1	100	76.804	ENSFHEG00000009154	exosc1	100	76.804	Fundulus_heteroclitus
ENSPMGG00000014002	exosc1	100	81.959	ENSGMOG00000008993	exosc1	100	81.959	Gadus_morhua
ENSPMGG00000014002	exosc1	98	75.301	ENSGALG00000039917	EXOSC1	98	75.301	Gallus_gallus
ENSPMGG00000014002	exosc1	100	89.349	ENSGAFG00000010265	exosc1	94	89.349	Gambusia_affinis
ENSPMGG00000014002	exosc1	100	79.897	ENSGACG00000018936	exosc1	100	79.897	Gasterosteus_aculeatus
ENSPMGG00000014002	exosc1	98	66.492	ENSGAGG00000019192	EXOSC1	98	66.492	Gopherus_agassizii
ENSPMGG00000014002	exosc1	98	77.108	ENSGGOG00000003099	EXOSC1	98	77.108	Gorilla_gorilla
ENSPMGG00000014002	exosc1	100	84.021	ENSHBUG00000017857	exosc1	100	84.021	Haplochromis_burtoni
ENSPMGG00000014002	exosc1	98	68.586	ENSHGLG00000016927	EXOSC1	98	68.586	Heterocephalus_glaber_female
ENSPMGG00000014002	exosc1	98	68.586	ENSHGLG00100012208	EXOSC1	98	68.586	Heterocephalus_glaber_male
ENSPMGG00000014002	exosc1	100	81.443	ENSHCOG00000019882	exosc1	100	81.443	Hippocampus_comes
ENSPMGG00000014002	exosc1	100	78.351	ENSIPUG00000007685	exosc1	100	78.351	Ictalurus_punctatus
ENSPMGG00000014002	exosc1	53	53.333	ENSSTOG00000029860	-	87	53.333	Ictidomys_tridecemlineatus
ENSPMGG00000014002	exosc1	98	68.586	ENSSTOG00000006615	EXOSC1	98	68.586	Ictidomys_tridecemlineatus
ENSPMGG00000014002	exosc1	98	68.586	ENSJJAG00000013311	Exosc1	98	68.586	Jaculus_jaculus
ENSPMGG00000014002	exosc1	100	92.982	ENSKMAG00000001202	exosc1	82	92.982	Kryptolebias_marmoratus
ENSPMGG00000014002	exosc1	100	82.990	ENSLBEG00000011448	exosc1	100	82.990	Labrus_bergylta
ENSPMGG00000014002	exosc1	100	65.341	ENSLOCG00000003776	exosc1	100	65.341	Lepisosteus_oculatus
ENSPMGG00000014002	exosc1	98	68.063	ENSLAFG00000015983	EXOSC1	98	68.063	Loxodonta_africana
ENSPMGG00000014002	exosc1	98	77.108	ENSMFAG00000001493	EXOSC1	98	77.108	Macaca_fascicularis
ENSPMGG00000014002	exosc1	98	77.108	ENSMMUG00000020028	EXOSC1	98	77.108	Macaca_mulatta
ENSPMGG00000014002	exosc1	98	77.108	ENSMNEG00000029816	EXOSC1	98	77.108	Macaca_nemestrina
ENSPMGG00000014002	exosc1	98	61.257	ENSMLEG00000027643	EXOSC1	98	61.257	Mandrillus_leucophaeus
ENSPMGG00000014002	exosc1	100	84.021	ENSMAMG00000012200	exosc1	100	84.021	Mastacembelus_armatus
ENSPMGG00000014002	exosc1	100	84.021	ENSMZEG00005007042	exosc1	100	84.021	Maylandia_zebra
ENSPMGG00000014002	exosc1	98	77.108	ENSMAUG00000020462	-	98	77.108	Mesocricetus_auratus
ENSPMGG00000014002	exosc1	98	77.108	ENSMICG00000007664	EXOSC1	98	77.108	Microcebus_murinus
ENSPMGG00000014002	exosc1	98	68.063	ENSMOCG00000006004	-	98	68.063	Microtus_ochrogaster
ENSPMGG00000014002	exosc1	96	63.492	ENSMOCG00000017124	-	96	63.492	Microtus_ochrogaster
ENSPMGG00000014002	exosc1	100	71.176	ENSMMOG00000021403	exosc1	100	71.176	Mola_mola
ENSPMGG00000014002	exosc1	98	68.229	ENSMODG00000004213	EXOSC1	98	68.229	Monodelphis_domestica
ENSPMGG00000014002	exosc1	95	82.162	ENSMALG00000007061	exosc1	93	82.162	Monopterus_albus
ENSPMGG00000014002	exosc1	98	68.063	MGP_CAROLIEiJ_G0022959	Exosc1	98	68.063	Mus_caroli
ENSPMGG00000014002	exosc1	98	68.063	ENSMUSG00000034321	Exosc1	98	68.063	Mus_musculus
ENSPMGG00000014002	exosc1	98	68.063	MGP_PahariEiJ_G0014449	Exosc1	98	68.063	Mus_pahari
ENSPMGG00000014002	exosc1	98	68.063	MGP_SPRETEiJ_G0023880	Exosc1	98	68.063	Mus_spretus
ENSPMGG00000014002	exosc1	98	68.586	ENSMPUG00000017044	EXOSC1	98	68.586	Mustela_putorius_furo
ENSPMGG00000014002	exosc1	98	68.586	ENSMLUG00000009228	EXOSC1	98	68.586	Myotis_lucifugus
ENSPMGG00000014002	exosc1	98	67.016	ENSNGAG00000022033	Exosc1	98	67.016	Nannospalax_galili
ENSPMGG00000014002	exosc1	100	75.882	ENSNBRG00000024007	exosc1	99	75.882	Neolamprologus_brichardi
ENSPMGG00000014002	exosc1	98	76.506	ENSNLEG00000013872	EXOSC1	98	76.506	Nomascus_leucogenys
ENSPMGG00000014002	exosc1	51	52.679	ENSMEUG00000002246	EXOSC1	97	52.679	Notamacropus_eugenii
ENSPMGG00000014002	exosc1	98	67.539	ENSOPRG00000005065	EXOSC1	98	67.539	Ochotona_princeps
ENSPMGG00000014002	exosc1	98	69.110	ENSODEG00000016709	EXOSC1	98	69.110	Octodon_degus
ENSPMGG00000014002	exosc1	100	84.021	ENSONIG00000017683	exosc1	99	84.021	Oreochromis_niloticus
ENSPMGG00000014002	exosc1	67	90.351	ENSOANG00000006563	EXOSC1	99	85.600	Ornithorhynchus_anatinus
ENSPMGG00000014002	exosc1	98	68.229	ENSOCUG00000011898	-	98	68.229	Oryctolagus_cuniculus
ENSPMGG00000014002	exosc1	99	63.542	ENSOCUG00000026461	-	98	63.542	Oryctolagus_cuniculus
ENSPMGG00000014002	exosc1	100	78.974	ENSORLG00000011595	exosc1	100	78.974	Oryzias_latipes
ENSPMGG00000014002	exosc1	100	78.974	ENSORLG00020005831	exosc1	100	78.974	Oryzias_latipes_hni
ENSPMGG00000014002	exosc1	100	78.462	ENSORLG00015004317	exosc1	100	78.462	Oryzias_latipes_hsok
ENSPMGG00000014002	exosc1	100	70.109	ENSOMEG00000013907	exosc1	99	70.109	Oryzias_melastigma
ENSPMGG00000014002	exosc1	98	67.539	ENSOGAG00000016259	EXOSC1	98	67.539	Otolemur_garnettii
ENSPMGG00000014002	exosc1	98	68.063	ENSOARG00000010136	EXOSC1	98	68.063	Ovis_aries
ENSPMGG00000014002	exosc1	98	61.140	ENSPPAG00000039842	EXOSC1	98	61.140	Pan_paniscus
ENSPMGG00000014002	exosc1	98	77.711	ENSPPRG00000023366	EXOSC1	98	77.711	Panthera_pardus
ENSPMGG00000014002	exosc1	98	77.711	ENSPTIG00000017701	EXOSC1	98	77.711	Panthera_tigris_altaica
ENSPMGG00000014002	exosc1	98	77.108	ENSPTRG00000002808	EXOSC1	98	77.108	Pan_troglodytes
ENSPMGG00000014002	exosc1	98	77.108	ENSPANG00000021324	EXOSC1	98	77.108	Papio_anubis
ENSPMGG00000014002	exosc1	100	80.412	ENSPKIG00000016037	exosc1	100	80.412	Paramormyrops_kingsleyae
ENSPMGG00000014002	exosc1	72	78.512	ENSPSIG00000013571	EXOSC1	98	78.512	Pelodiscus_sinensis
ENSPMGG00000014002	exosc1	98	68.063	ENSPEMG00000010710	-	98	68.063	Peromyscus_maniculatus_bairdii
ENSPMGG00000014002	exosc1	95	60.215	ENSPMAG00000000195	exosc1	95	60.215	Petromyzon_marinus
ENSPMGG00000014002	exosc1	98	68.063	ENSPCIG00000002210	EXOSC1	97	68.063	Phascolarctos_cinereus
ENSPMGG00000014002	exosc1	100	76.804	ENSPFOG00000006755	exosc1	95	76.804	Poecilia_formosa
ENSPMGG00000014002	exosc1	93	89.241	ENSPLAG00000005880	exosc1	98	89.241	Poecilia_latipinna
ENSPMGG00000014002	exosc1	100	88.166	ENSPMEG00000015598	exosc1	94	88.166	Poecilia_mexicana
ENSPMGG00000014002	exosc1	100	88.166	ENSPREG00000000405	exosc1	94	88.166	Poecilia_reticulata
ENSPMGG00000014002	exosc1	98	67.016	ENSPPYG00000002531	EXOSC1	98	67.016	Pongo_abelii
ENSPMGG00000014002	exosc1	98	68.586	ENSPCAG00000009135	EXOSC1	98	68.586	Procavia_capensis
ENSPMGG00000014002	exosc1	98	69.880	ENSPCOG00000027539	EXOSC1	97	69.880	Propithecus_coquereli
ENSPMGG00000014002	exosc1	98	68.586	ENSPVAG00000003372	EXOSC1	98	68.586	Pteropus_vampyrus
ENSPMGG00000014002	exosc1	100	96.450	ENSPNYG00000021745	exosc1	99	96.450	Pundamilia_nyererei
ENSPMGG00000014002	exosc1	94	91.824	ENSPNAG00000001944	exosc1	95	91.824	Pygocentrus_nattereri
ENSPMGG00000014002	exosc1	98	68.063	ENSRNOG00000048708	Exosc1	98	68.063	Rattus_norvegicus
ENSPMGG00000014002	exosc1	98	77.108	ENSRBIG00000035618	EXOSC1	98	77.108	Rhinopithecus_bieti
ENSPMGG00000014002	exosc1	98	77.108	ENSRROG00000032589	EXOSC1	98	77.108	Rhinopithecus_roxellana
ENSPMGG00000014002	exosc1	98	77.711	ENSSBOG00000000359	EXOSC1	98	77.711	Saimiri_boliviensis_boliviensis
ENSPMGG00000014002	exosc1	72	89.344	ENSSHAG00000018219	EXOSC1	83	89.344	Sarcophilus_harrisii
ENSPMGG00000014002	exosc1	99	86.905	ENSSFOG00015016289	-	98	86.905	Scleropages_formosus
ENSPMGG00000014002	exosc1	100	77.835	ENSSFOG00015009069	exosc1	100	77.835	Scleropages_formosus
ENSPMGG00000014002	exosc1	100	83.505	ENSSMAG00000003721	exosc1	100	83.505	Scophthalmus_maximus
ENSPMGG00000014002	exosc1	100	84.021	ENSSDUG00000002993	exosc1	100	84.021	Seriola_dumerili
ENSPMGG00000014002	exosc1	100	84.021	ENSSLDG00000025181	exosc1	100	84.021	Seriola_lalandi_dorsalis
ENSPMGG00000014002	exosc1	98	67.539	ENSSARG00000000162	EXOSC1	98	67.539	Sorex_araneus
ENSPMGG00000014002	exosc1	98	63.351	ENSSPUG00000012263	EXOSC1	98	63.351	Sphenodon_punctatus
ENSPMGG00000014002	exosc1	100	74.742	ENSSPAG00000016792	exosc1	83	74.742	Stegastes_partitus
ENSPMGG00000014002	exosc1	98	67.539	ENSSSCG00000010518	EXOSC1	89	67.539	Sus_scrofa
ENSPMGG00000014002	exosc1	98	67.016	ENSTGUG00000009692	EXOSC1	98	67.016	Taeniopygia_guttata
ENSPMGG00000014002	exosc1	98	70.526	ENSTRUG00000007706	exosc1	98	70.526	Takifugu_rubripes
ENSPMGG00000014002	exosc1	98	70.466	ENSTNIG00000014079	exosc1	97	70.466	Tetraodon_nigroviridis
ENSPMGG00000014002	exosc1	98	66.842	ENSTBEG00000006011	EXOSC1	98	66.842	Tupaia_belangeri
ENSPMGG00000014002	exosc1	93	69.399	ENSTTRG00000009887	EXOSC1	99	69.399	Tursiops_truncatus
ENSPMGG00000014002	exosc1	98	59.036	ENSUAMG00000010266	EXOSC1	97	59.036	Ursus_americanus
ENSPMGG00000014002	exosc1	98	59.036	ENSUMAG00000022002	EXOSC1	97	59.036	Ursus_maritimus
ENSPMGG00000014002	exosc1	98	68.586	ENSVVUG00000023192	EXOSC1	62	68.586	Vulpes_vulpes
ENSPMGG00000014002	exosc1	99	65.285	ENSXETG00000003434	exosc1	99	65.285	Xenopus_tropicalis
ENSPMGG00000014002	exosc1	72	91.736	ENSXCOG00000014499	exosc1	93	91.736	Xiphophorus_couchianus
ENSPMGG00000014002	exosc1	100	88.757	ENSXMAG00000023382	exosc1	94	88.757	Xiphophorus_maculatus