EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000014174 (Gene tree)
Gene ID: -
Gene Symbol: arf1
Alias: -
Full Name: ADP-ribosylation factor 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 4251 bases
Position: chrKN465921.1:131593-135843
Accession: ZDB-GENE-010724-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000018711	MMR_HSR1	PF01926.23	1.7e-05	1	1
ENSPMGP00000018843	MMR_HSR1	PF01926.23	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000019957	-	522	-	ENSPMGP00000018711	173 (aa)	-	-
ENSPMGT00000020091	-	543	-	ENSPMGP00000018843	180 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000014174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000014174's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000014174	arf1	100	90.608	ENSACIG00000012192	-	100	90.608	Amphilophus_citrinellus
ENSPMGG00000014174	arf1	82	91.549	ENSAOCG00000001275	-	88	88.816	Amphiprion_ocellaris
ENSPMGG00000014174	arf1	99	91.228	ENSAPEG00000016909	-	100	88.950	Amphiprion_percula
ENSPMGG00000014174	arf1	100	89.503	ENSATEG00000003174	-	100	89.503	Anabas_testudineus
ENSPMGG00000014174	arf1	100	90.608	ENSACLG00000004123	-	100	90.608	Astatotilapia_calliptera
ENSPMGG00000014174	arf1	100	91.111	ENSAMXG00000019845	arf1	100	91.111	Astyanax_mexicanus
ENSPMGG00000014174	arf1	98	91.176	ENSCVAG00000013374	-	100	88.950	Cyprinodon_variegatus
ENSPMGG00000014174	arf1	100	91.111	ENSDARG00000009484	arf1	100	91.111	Danio_rerio
ENSPMGG00000014174	arf1	100	91.111	ENSELUG00000022533	arf1	79	91.111	Esox_lucius
ENSPMGG00000014174	arf1	98	91.176	ENSFHEG00000005859	-	100	88.950	Fundulus_heteroclitus
ENSPMGG00000014174	arf1	96	90.173	ENSGMOG00000000429	arf1	95	90.173	Gadus_morhua
ENSPMGG00000014174	arf1	98	91.176	ENSGAFG00000018151	-	100	88.950	Gambusia_affinis
ENSPMGG00000014174	arf1	99	84.795	ENSGACG00000014195	-	97	82.222	Gasterosteus_aculeatus
ENSPMGG00000014174	arf1	100	90.608	ENSHBUG00000002636	-	100	90.608	Haplochromis_burtoni
ENSPMGG00000014174	arf1	100	91.667	ENSIPUG00000006311	arf1	100	91.667	Ictalurus_punctatus
ENSPMGG00000014174	arf1	100	88.950	ENSKMAG00000018315	-	100	88.950	Kryptolebias_marmoratus
ENSPMGG00000014174	arf1	100	85.549	ENSLBEG00000023263	-	100	83.978	Labrus_bergylta
ENSPMGG00000014174	arf1	99	88.764	ENSLBEG00000001998	arf1	99	88.764	Labrus_bergylta
ENSPMGG00000014174	arf1	100	90.055	ENSMAMG00000001553	-	100	90.055	Mastacembelus_armatus
ENSPMGG00000014174	arf1	100	90.608	ENSMZEG00005022594	-	100	90.608	Maylandia_zebra
ENSPMGG00000014174	arf1	100	90.055	ENSMALG00000004269	-	100	90.055	Monopterus_albus
ENSPMGG00000014174	arf1	100	90.608	ENSNBRG00000016455	-	100	90.608	Neolamprologus_brichardi
ENSPMGG00000014174	arf1	100	90.608	ENSONIG00000001286	-	100	90.608	Oreochromis_niloticus
ENSPMGG00000014174	arf1	100	89.503	ENSORLG00000023270	-	100	89.503	Oryzias_latipes
ENSPMGG00000014174	arf1	100	88.950	ENSORLG00020006712	-	100	88.950	Oryzias_latipes_hni
ENSPMGG00000014174	arf1	100	89.503	ENSORLG00015019836	-	100	89.503	Oryzias_latipes_hsok
ENSPMGG00000014174	arf1	100	89.503	ENSOMEG00000023784	-	100	89.503	Oryzias_melastigma
ENSPMGG00000014174	arf1	99	91.228	ENSPMAG00000002035	arf1	100	88.333	Petromyzon_marinus
ENSPMGG00000014174	arf1	98	91.176	ENSPFOG00000014787	-	100	88.950	Poecilia_formosa
ENSPMGG00000014174	arf1	98	91.176	ENSPLAG00000001041	-	100	88.950	Poecilia_latipinna
ENSPMGG00000014174	arf1	98	91.176	ENSPMEG00000024077	-	100	88.950	Poecilia_mexicana
ENSPMGG00000014174	arf1	98	91.176	ENSPREG00000009009	-	100	88.950	Poecilia_reticulata
ENSPMGG00000014174	arf1	100	90.608	ENSPNYG00000009472	-	100	90.608	Pundamilia_nyererei
ENSPMGG00000014174	arf1	98	92.899	ENSPNAG00000000098	arf1	93	92.899	Pygocentrus_nattereri
ENSPMGG00000014174	arf1	98	79.290	YDL137W	-	99	77.095	Saccharomyces_cerevisiae
ENSPMGG00000014174	arf1	98	80.000	YDL192W	-	99	77.778	Saccharomyces_cerevisiae
ENSPMGG00000014174	arf1	98	89.412	ENSSMAG00000006125	-	100	85.556	Scophthalmus_maximus
ENSPMGG00000014174	arf1	98	91.176	ENSSDUG00000017356	-	100	87.778	Seriola_dumerili
ENSPMGG00000014174	arf1	98	91.176	ENSSLDG00000008504	-	100	87.778	Seriola_lalandi_dorsalis
ENSPMGG00000014174	arf1	100	89.503	ENSSPAG00000011431	-	100	89.503	Stegastes_partitus
ENSPMGG00000014174	arf1	100	88.950	ENSTRUG00000019870	-	100	88.950	Takifugu_rubripes
ENSPMGG00000014174	arf1	98	90.000	ENSTNIG00000011685	-	100	86.667	Tetraodon_nigroviridis
ENSPMGG00000014174	arf1	98	91.176	ENSXCOG00000016687	-	98	88.950	Xiphophorus_couchianus
ENSPMGG00000014174	arf1	98	91.176	ENSXMAG00000009193	-	98	91.176	Xiphophorus_maculatus