EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000014431 (Gene tree)
Gene ID: -
Gene Symbol: parn
Alias: -
Full Name: poly(A)-specific ribonuclease (deadenylation nuclease)
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 8808 bases
Position: chrKN468128.1:25331-34138
Accession: ZDB-GENE-040426-880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000017686	RNA_bind	PF08675.11	1e-33	1	1
ENSPMGP00000017686	CAF1	PF04857.20	1.8e-74	1	2
ENSPMGP00000017686	CAF1	PF04857.20	1.8e-74	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000018869	-	2082	-	ENSPMGP00000017686	693 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000014431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000014431's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000014431	parn	75	74.954	ENSG00000140694	PARN	91	76.271	Homo_sapiens
ENSPMGG00000014431	parn	77	73.153	ENSAMEG00000011208	PARN	80	76.117	Ailuropoda_melanoleuca
ENSPMGG00000014431	parn	77	85.316	ENSACIG00000000619	parn	99	74.531	Amphilophus_citrinellus
ENSPMGG00000014431	parn	85	79.675	ENSAOCG00000003465	parn	89	79.024	Amphiprion_ocellaris
ENSPMGG00000014431	parn	68	85.051	ENSAPEG00000010661	parn	94	84.848	Amphiprion_percula
ENSPMGG00000014431	parn	83	81.198	ENSATEG00000004661	parn	87	81.032	Anabas_testudineus
ENSPMGG00000014431	parn	79	71.555	ENSAPLG00000013914	PARN	89	71.201	Anas_platyrhynchos
ENSPMGG00000014431	parn	75	74.444	ENSACAG00000004973	PARN	83	74.259	Anolis_carolinensis
ENSPMGG00000014431	parn	75	74.954	ENSANAG00000031516	PARN	91	76.271	Aotus_nancymaae
ENSPMGG00000014431	parn	85	80.065	ENSACLG00000004742	parn	90	79.739	Astatotilapia_calliptera
ENSPMGG00000014431	parn	83	75.885	ENSAMXG00000012390	parn	97	71.973	Astyanax_mexicanus
ENSPMGG00000014431	parn	74	73.321	ENSBTAG00000018097	PARN	78	76.821	Bos_taurus
ENSPMGG00000014431	parn	75	75.046	ENSCJAG00000015866	PARN	91	76.271	Callithrix_jacchus
ENSPMGG00000014431	parn	77	72.924	ENSCAFG00000018795	PARN	80	76.265	Canis_familiaris
ENSPMGG00000014431	parn	77	73.285	ENSCAFG00020024126	PARN	80	76.459	Canis_lupus_dingo
ENSPMGG00000014431	parn	74	75.327	ENSCHIG00000018143	PARN	80	76.848	Capra_hircus
ENSPMGG00000014431	parn	65	52.586	ENSCAPG00000007984	PARN	78	52.155	Cavia_aperea
ENSPMGG00000014431	parn	74	74.579	ENSCPOG00000002263	PARN	81	76.070	Cavia_porcellus
ENSPMGG00000014431	parn	75	75.231	ENSCCAG00000030367	PARN	91	76.271	Cebus_capucinus
ENSPMGG00000014431	parn	74	75.093	ENSCATG00000041368	PARN	92	76.459	Cercocebus_atys
ENSPMGG00000014431	parn	77	73.285	ENSCLAG00000015406	PARN	80	76.848	Chinchilla_lanigera
ENSPMGG00000014431	parn	75	75.046	ENSCSAG00000008142	PARN	80	77.043	Chlorocebus_sabaeus
ENSPMGG00000014431	parn	76	56.960	ENSCHOG00000007014	PARN	80	58.893	Choloepus_hoffmanni
ENSPMGG00000014431	parn	71	71.961	ENSCPBG00000006609	PARN	78	77.263	Chrysemys_picta_bellii
ENSPMGG00000014431	parn	71	40.901	ENSCING00000010142	-	99	39.962	Ciona_intestinalis
ENSPMGG00000014431	parn	75	63.177	ENSCANG00000028849	-	72	76.271	Colobus_angolensis_palliatus
ENSPMGG00000014431	parn	76	72.152	ENSCGRG00001012096	Parn	87	72.152	Cricetulus_griseus_chok1gshd
ENSPMGG00000014431	parn	76	72.152	ENSCGRG00000004939	Parn	87	72.152	Cricetulus_griseus_crigri
ENSPMGG00000014431	parn	84	77.467	ENSCSEG00000002064	parn	100	73.182	Cynoglossus_semilaevis
ENSPMGG00000014431	parn	85	76.998	ENSCVAG00000014848	parn	90	76.998	Cyprinodon_variegatus
ENSPMGG00000014431	parn	83	69.587	ENSDARG00000102634	parn	91	69.522	Danio_rerio
ENSPMGG00000014431	parn	77	73.466	ENSDNOG00000000833	PARN	90	76.654	Dasypus_novemcinctus
ENSPMGG00000014431	parn	60	73.864	ENSETEG00000014828	-	69	73.106	Echinops_telfairi
ENSPMGG00000014431	parn	77	73.237	ENSEASG00005011400	PARN	86	72.744	Equus_asinus_asinus
ENSPMGG00000014431	parn	77	73.056	ENSECAG00000017792	PARN	86	72.563	Equus_caballus
ENSPMGG00000014431	parn	56	78.049	ENSEEUG00000010370	PARN	61	78.049	Erinaceus_europaeus
ENSPMGG00000014431	parn	84	73.693	ENSELUG00000013139	parn	81	73.366	Esox_lucius
ENSPMGG00000014431	parn	77	73.466	ENSFCAG00000044961	PARN	80	76.848	Felis_catus
ENSPMGG00000014431	parn	79	71.053	ENSFALG00000003911	PARN	79	76.023	Ficedula_albicollis
ENSPMGG00000014431	parn	74	75.093	ENSFDAG00000009234	PARN	81	76.654	Fukomys_damarensis
ENSPMGG00000014431	parn	85	71.498	ENSFHEG00000013738	parn	92	81.356	Fundulus_heteroclitus
ENSPMGG00000014431	parn	76	80.000	ENSGMOG00000003231	parn	99	79.817	Gadus_morhua
ENSPMGG00000014431	parn	79	70.753	ENSGALG00000003091	PARN	81	76.459	Gallus_gallus
ENSPMGG00000014431	parn	85	76.748	ENSGAFG00000011061	parn	90	76.423	Gambusia_affinis
ENSPMGG00000014431	parn	77	82.310	ENSGACG00000019501	parn	89	82.130	Gasterosteus_aculeatus
ENSPMGG00000014431	parn	75	74.954	ENSGGOG00000025224	PARN	91	76.271	Gorilla_gorilla
ENSPMGG00000014431	parn	85	80.065	ENSHBUG00000017906	parn	93	82.321	Haplochromis_burtoni
ENSPMGG00000014431	parn	77	72.383	ENSHGLG00000010886	PARN	81	76.070	Heterocephalus_glaber_female
ENSPMGG00000014431	parn	77	72.383	ENSHGLG00100014659	PARN	81	76.070	Heterocephalus_glaber_male
ENSPMGG00000014431	parn	76	77.596	ENSHCOG00000008683	parn	94	76.812	Hippocampus_comes
ENSPMGG00000014431	parn	86	60.905	ENSIPUG00000012401	parn	91	60.968	Ictalurus_punctatus
ENSPMGG00000014431	parn	74	73.978	ENSSTOG00000007519	PARN	81	75.486	Ictidomys_tridecemlineatus
ENSPMGG00000014431	parn	74	73.832	ENSJJAG00000023049	Parn	82	75.292	Jaculus_jaculus
ENSPMGG00000014431	parn	85	77.236	ENSKMAG00000009462	parn	90	76.585	Kryptolebias_marmoratus
ENSPMGG00000014431	parn	86	76.911	ENSLBEG00000009167	parn	98	76.911	Labrus_bergylta
ENSPMGG00000014431	parn	70	71.739	ENSLACG00000004207	PARN	99	70.813	Latimeria_chalumnae
ENSPMGG00000014431	parn	78	77.540	ENSLOCG00000000715	parn	80	77.256	Lepisosteus_oculatus
ENSPMGG00000014431	parn	77	73.646	ENSLAFG00000015036	PARN	81	77.237	Loxodonta_africana
ENSPMGG00000014431	parn	75	74.906	ENSMFAG00000044852	PARN	79	76.938	Macaca_fascicularis
ENSPMGG00000014431	parn	75	75.046	ENSMMUG00000018849	PARN	80	77.043	Macaca_mulatta
ENSPMGG00000014431	parn	75	75.046	ENSMNEG00000045108	PARN	80	77.043	Macaca_nemestrina
ENSPMGG00000014431	parn	75	74.861	ENSMLEG00000031743	PARN	80	76.848	Mandrillus_leucophaeus
ENSPMGG00000014431	parn	85	78.641	ENSMAMG00000006939	parn	90	78.387	Mastacembelus_armatus
ENSPMGG00000014431	parn	85	80.065	ENSMZEG00005013590	parn	94	82.143	Maylandia_zebra
ENSPMGG00000014431	parn	76	70.932	ENSMGAG00000001004	PARN	77	76.327	Meleagris_gallopavo
ENSPMGG00000014431	parn	76	68.327	ENSMAUG00000008025	Parn	81	71.456	Mesocricetus_auratus
ENSPMGG00000014431	parn	77	73.646	ENSMICG00000016053	PARN	91	74.576	Microcebus_murinus
ENSPMGG00000014431	parn	68	75.506	ENSMOCG00000022211	Parn	100	75.506	Microtus_ochrogaster
ENSPMGG00000014431	parn	77	80.466	ENSMMOG00000011333	parn	91	79.570	Mola_mola
ENSPMGG00000014431	parn	68	76.056	ENSMODG00000004915	PARN	99	75.654	Monodelphis_domestica
ENSPMGG00000014431	parn	76	85.145	ENSMALG00000019426	parn	93	84.783	Monopterus_albus
ENSPMGG00000014431	parn	80	69.896	MGP_CAROLIEiJ_G0020466	Parn	81	75.439	Mus_caroli
ENSPMGG00000014431	parn	71	75.195	ENSMUSG00000022685	Parn	100	74.390	Mus_musculus
ENSPMGG00000014431	parn	80	69.550	MGP_PahariEiJ_G0016172	Parn	81	75.244	Mus_pahari
ENSPMGG00000014431	parn	74	73.684	MGP_SPRETEiJ_G0021361	Parn	81	75.244	Mus_spretus
ENSPMGG00000014431	parn	77	73.466	ENSMPUG00000014464	PARN	80	76.848	Mustela_putorius_furo
ENSPMGG00000014431	parn	68	76.364	ENSMLUG00000005414	PARN	100	75.758	Myotis_lucifugus
ENSPMGG00000014431	parn	77	81.688	ENSNBRG00000006805	parn	94	81.867	Neolamprologus_brichardi
ENSPMGG00000014431	parn	75	75.046	ENSNLEG00000010241	PARN	91	76.271	Nomascus_leucogenys
ENSPMGG00000014431	parn	76	51.913	ENSMEUG00000008178	-	80	54.348	Notamacropus_eugenii
ENSPMGG00000014431	parn	73	71.321	ENSOPRG00000012187	PARN	83	70.510	Ochotona_princeps
ENSPMGG00000014431	parn	77	67.684	ENSODEG00000001617	PARN	82	70.793	Octodon_degus
ENSPMGG00000014431	parn	85	80.065	ENSONIG00000000151	parn	90	79.739	Oreochromis_niloticus
ENSPMGG00000014431	parn	76	73.953	ENSOCUG00000000322	PARN	80	77.407	Oryctolagus_cuniculus
ENSPMGG00000014431	parn	82	78.283	ENSORLG00020010313	parn	88	78.283	Oryzias_latipes_hni
ENSPMGG00000014431	parn	82	77.946	ENSORLG00015000300	parn	88	77.946	Oryzias_latipes_hsok
ENSPMGG00000014431	parn	83	77.759	ENSOMEG00000019555	parn	97	75.342	Oryzias_melastigma
ENSPMGG00000014431	parn	68	75.000	ENSOGAG00000014626	PARN	100	73.939	Otolemur_garnettii
ENSPMGG00000014431	parn	68	76.768	ENSOARG00000007574	PARN	100	76.364	Ovis_aries
ENSPMGG00000014431	parn	75	74.770	ENSPPAG00000031438	PARN	91	76.271	Pan_paniscus
ENSPMGG00000014431	parn	77	73.466	ENSPPRG00000018583	PARN	80	76.848	Panthera_pardus
ENSPMGG00000014431	parn	77	73.466	ENSPTIG00000012135	PARN	80	76.848	Panthera_tigris_altaica
ENSPMGG00000014431	parn	75	74.770	ENSPTRG00000007792	PARN	91	76.271	Pan_troglodytes
ENSPMGG00000014431	parn	75	72.913	ENSPANG00000020099	PARN	80	74.701	Papio_anubis
ENSPMGG00000014431	parn	85	70.569	ENSPKIG00000022807	parn	87	72.093	Paramormyrops_kingsleyae
ENSPMGG00000014431	parn	79	72.329	ENSPSIG00000014804	PARN	89	71.454	Pelodiscus_sinensis
ENSPMGG00000014431	parn	77	69.589	ENSPEMG00000018439	Parn	81	73.633	Peromyscus_maniculatus_bairdii
ENSPMGG00000014431	parn	72	67.052	ENSPMAG00000003956	parn	98	66.602	Petromyzon_marinus
ENSPMGG00000014431	parn	58	71.394	ENSPCIG00000001259	PARN	91	76.271	Phascolarctos_cinereus
ENSPMGG00000014431	parn	85	76.260	ENSPFOG00000012823	parn	90	75.935	Poecilia_formosa
ENSPMGG00000014431	parn	85	76.423	ENSPLAG00000006395	parn	90	76.098	Poecilia_latipinna
ENSPMGG00000014431	parn	85	76.260	ENSPMEG00000007711	parn	90	75.935	Poecilia_mexicana
ENSPMGG00000014431	parn	85	76.423	ENSPREG00000000147	parn	90	76.098	Poecilia_reticulata
ENSPMGG00000014431	parn	75	74.312	ENSPPYG00000007123	PARN	80	76.357	Pongo_abelii
ENSPMGG00000014431	parn	72	63.916	ENSPCAG00000001741	PARN	79	66.250	Procavia_capensis
ENSPMGG00000014431	parn	77	73.655	ENSPCOG00000019292	PARN	91	74.576	Propithecus_coquereli
ENSPMGG00000014431	parn	76	71.298	ENSPVAG00000002547	PARN	80	74.556	Pteropus_vampyrus
ENSPMGG00000014431	parn	85	79.902	ENSPNYG00000006835	parn	94	79.821	Pundamilia_nyererei
ENSPMGG00000014431	parn	76	74.589	ENSPNAG00000018905	parn	88	74.406	Pygocentrus_nattereri
ENSPMGG00000014431	parn	80	69.603	ENSRNOG00000002912	Parn	96	79.592	Rattus_norvegicus
ENSPMGG00000014431	parn	75	73.383	ENSSBOG00000034726	PARN	80	75.292	Saimiri_boliviensis_boliviensis
ENSPMGG00000014431	parn	57	74.224	ENSSHAG00000008493	PARN	94	73.508	Sarcophilus_harrisii
ENSPMGG00000014431	parn	85	71.151	ENSSFOG00015014165	parn	98	70.370	Scleropages_formosus
ENSPMGG00000014431	parn	85	78.029	ENSSMAG00000000685	parn	91	78.826	Scophthalmus_maximus
ENSPMGG00000014431	parn	85	79.903	ENSSDUG00000014555	parn	90	79.903	Seriola_dumerili
ENSPMGG00000014431	parn	60	76.552	ENSSARG00000014339	PARN	75	76.092	Sorex_araneus
ENSPMGG00000014431	parn	79	71.454	ENSSPUG00000007719	PARN	80	76.070	Sphenodon_punctatus
ENSPMGG00000014431	parn	85	79.870	ENSSPAG00000007095	parn	90	79.383	Stegastes_partitus
ENSPMGG00000014431	parn	77	73.184	ENSSSCG00000007878	PARN	77	72.563	Sus_scrofa
ENSPMGG00000014431	parn	79	71.103	ENSTGUG00000004971	PARN	89	70.877	Taeniopygia_guttata
ENSPMGG00000014431	parn	78	81.996	ENSTNIG00000008252	parn	89	81.640	Tetraodon_nigroviridis
ENSPMGG00000014431	parn	68	62.348	ENSTBEG00000010407	PARN	78	65.419	Tupaia_belangeri
ENSPMGG00000014431	parn	67	76.337	ENSTTRG00000002843	PARN	77	75.720	Tursiops_truncatus
ENSPMGG00000014431	parn	60	72.340	ENSUAMG00000008283	PARN	94	68.085	Ursus_americanus
ENSPMGG00000014431	parn	77	73.285	ENSUMAG00000004527	PARN	80	76.654	Ursus_maritimus
ENSPMGG00000014431	parn	76	70.567	ENSVPAG00000008968	PARN	82	73.570	Vicugna_pacos
ENSPMGG00000014431	parn	77	73.285	ENSVVUG00000019509	PARN	80	76.654	Vulpes_vulpes
ENSPMGG00000014431	parn	74	73.258	ENSXETG00000010994	parn	98	73.828	Xenopus_tropicalis
ENSPMGG00000014431	parn	83	76.689	ENSXCOG00000015990	parn	99	76.182	Xiphophorus_couchianus
ENSPMGG00000014431	parn	85	76.748	ENSXMAG00000014783	parn	90	76.098	Xiphophorus_maculatus