EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000014877 (Gene tree)
Gene ID: -
Gene Symbol: chd6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 60006 bases
Position: chrKN460559.1:7787-67792
Accession: ZDB-GENE-130530-559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000018197	ResIII	PF04851.15	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000019411	-	6714	-	ENSPMGP00000018197	2237 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000014877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000014877's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000014877	chd6	88	76.671	ENSG00000124177	CHD6	99	81.395	Homo_sapiens
ENSPMGG00000014877	chd6	99	79.219	ENSAPOG00000013736	chd6	78	80.350	Acanthochromis_polyacanthus
ENSPMGG00000014877	chd6	84	75.413	ENSAMEG00000009496	CHD6	76	76.420	Ailuropoda_melanoleuca
ENSPMGG00000014877	chd6	96	78.970	ENSATEG00000005608	chd6	77	80.221	Anabas_testudineus
ENSPMGG00000014877	chd6	86	76.277	ENSAPLG00000015592	CHD6	75	77.098	Anas_platyrhynchos
ENSPMGG00000014877	chd6	82	73.099	ENSACAG00000006842	CHD6	74	70.981	Anolis_carolinensis
ENSPMGG00000014877	chd6	88	76.879	ENSANAG00000037548	CHD6	99	82.202	Aotus_nancymaae
ENSPMGG00000014877	chd6	91	74.206	ENSAMXG00000009576	chd6	76	74.656	Astyanax_mexicanus
ENSPMGG00000014877	chd6	89	76.458	ENSBTAG00000005733	CHD6	77	76.420	Bos_taurus
ENSPMGG00000014877	chd6	88	76.879	ENSCJAG00000017920	CHD6	99	82.202	Callithrix_jacchus
ENSPMGG00000014877	chd6	88	75.275	ENSCAFG00000009236	CHD6	76	76.349	Canis_familiaris
ENSPMGG00000014877	chd6	88	75.622	ENSCAFG00020012906	CHD6	95	84.749	Canis_lupus_dingo
ENSPMGG00000014877	chd6	89	76.753	ENSCHIG00000017606	CHD6	77	77.100	Capra_hircus
ENSPMGG00000014877	chd6	75	77.500	ENSTSYG00000014635	CHD6	82	77.417	Carlito_syrichta
ENSPMGG00000014877	chd6	89	75.069	ENSCPOG00000015641	CHD6	76	76.065	Cavia_porcellus
ENSPMGG00000014877	chd6	88	76.951	ENSCCAG00000036828	CHD6	99	82.202	Cebus_capucinus
ENSPMGG00000014877	chd6	83	76.686	ENSCATG00000039248	CHD6	99	82.202	Cercocebus_atys
ENSPMGG00000014877	chd6	84	75.275	ENSCLAG00000013743	CHD6	76	76.387	Chinchilla_lanigera
ENSPMGG00000014877	chd6	88	76.529	ENSCSAG00000013997	CHD6	77	76.387	Chlorocebus_sabaeus
ENSPMGG00000014877	chd6	67	73.620	ENSCHOG00000012647	CHD6	62	73.620	Choloepus_hoffmanni
ENSPMGG00000014877	chd6	88	78.339	ENSCPBG00000019382	CHD6	76	77.532	Chrysemys_picta_bellii
ENSPMGG00000014877	chd6	88	77.188	ENSCANG00000043435	CHD6	99	82.202	Colobus_angolensis_palliatus
ENSPMGG00000014877	chd6	84	74.862	ENSCGRG00001002694	Chd6	77	75.818	Cricetulus_griseus_chok1gshd
ENSPMGG00000014877	chd6	89	78.958	ENSDARG00000017244	chd6	76	78.958	Danio_rerio
ENSPMGG00000014877	chd6	88	76.600	ENSDNOG00000004176	CHD6	77	76.655	Dasypus_novemcinctus
ENSPMGG00000014877	chd6	83	77.315	ENSEASG00005023433	CHD6	95	86.293	Equus_asinus_asinus
ENSPMGG00000014877	chd6	83	76.562	ENSECAG00000011761	CHD6	77	76.491	Equus_caballus
ENSPMGG00000014877	chd6	89	80.014	ENSELUG00000012309	chd6	93	80.014	Esox_lucius
ENSPMGG00000014877	chd6	84	75.309	ENSFCAG00000003572	CHD6	75	76.491	Felis_catus
ENSPMGG00000014877	chd6	85	76.797	ENSFALG00000012563	CHD6	73	76.726	Ficedula_albicollis
ENSPMGG00000014877	chd6	90	75.378	ENSFDAG00000013791	CHD6	77	76.491	Fukomys_damarensis
ENSPMGG00000014877	chd6	84	76.657	ENSGMOG00000011715	chd6	89	78.069	Gadus_morhua
ENSPMGG00000014877	chd6	96	66.719	ENSGACG00000000037	chd6	95	67.610	Gasterosteus_aculeatus
ENSPMGG00000014877	chd6	88	76.736	ENSGGOG00000013123	CHD6	99	82.202	Gorilla_gorilla
ENSPMGG00000014877	chd6	96	78.709	ENSHBUG00000014701	chd6	77	79.916	Haplochromis_burtoni
ENSPMGG00000014877	chd6	84	75.069	ENSHGLG00000004548	CHD6	76	76.387	Heterocephalus_glaber_female
ENSPMGG00000014877	chd6	84	75.069	ENSHGLG00100006401	CHD6	76	76.387	Heterocephalus_glaber_male
ENSPMGG00000014877	chd6	92	75.382	ENSIPUG00000003692	chd6	76	86.842	Ictalurus_punctatus
ENSPMGG00000014877	chd6	84	75.482	ENSSTOG00000013382	CHD6	77	76.529	Ictidomys_tridecemlineatus
ENSPMGG00000014877	chd6	82	76.836	ENSLACG00000010881	CHD6	77	76.836	Latimeria_chalumnae
ENSPMGG00000014877	chd6	82	79.738	ENSLOCG00000007386	chd6	76	79.669	Lepisosteus_oculatus
ENSPMGG00000014877	chd6	88	76.726	ENSLAFG00000012144	CHD6	78	76.316	Loxodonta_africana
ENSPMGG00000014877	chd6	83	77.061	ENSMFAG00000032830	CHD6	99	82.202	Macaca_fascicularis
ENSPMGG00000014877	chd6	83	76.600	ENSMMUG00000020458	CHD6	99	82.202	Macaca_mulatta
ENSPMGG00000014877	chd6	86	76.600	ENSMNEG00000040847	CHD6	99	82.202	Macaca_nemestrina
ENSPMGG00000014877	chd6	86	76.600	ENSMLEG00000031965	CHD6	99	82.202	Mandrillus_leucophaeus
ENSPMGG00000014877	chd6	96	80.061	ENSMAMG00000013111	chd6	76	81.130	Mastacembelus_armatus
ENSPMGG00000014877	chd6	87	73.720	ENSMGAG00000001121	CHD6	77	73.652	Meleagris_gallopavo
ENSPMGG00000014877	chd6	88	76.600	ENSMICG00000016641	CHD6	99	82.018	Microcebus_murinus
ENSPMGG00000014877	chd6	81	78.171	ENSMODG00000000720	-	80	78.171	Monodelphis_domestica
ENSPMGG00000014877	chd6	85	74.708	MGP_CAROLIEiJ_G0024604	Chd6	80	84.591	Mus_caroli
ENSPMGG00000014877	chd6	84	74.777	ENSMUSG00000057133	Chd6	80	84.696	Mus_musculus
ENSPMGG00000014877	chd6	84	74.380	MGP_PahariEiJ_G0026048	Chd6	80	84.486	Mus_pahari
ENSPMGG00000014877	chd6	84	74.777	MGP_SPRETEiJ_G0025526	Chd6	80	84.696	Mus_spretus
ENSPMGG00000014877	chd6	84	75.395	ENSMPUG00000017695	CHD6	76	76.579	Mustela_putorius_furo
ENSPMGG00000014877	chd6	88	76.190	ENSMLUG00000016247	CHD6	77	75.926	Myotis_lucifugus
ENSPMGG00000014877	chd6	93	85.601	ENSNBRG00000013839	chd6	85	85.553	Neolamprologus_brichardi
ENSPMGG00000014877	chd6	83	75.447	ENSNLEG00000006496	CHD6	77	75.683	Nomascus_leucogenys
ENSPMGG00000014877	chd6	84	72.934	ENSOPRG00000013376	-	72	73.811	Ochotona_princeps
ENSPMGG00000014877	chd6	96	86.477	ENSONIG00000000393	chd6	87	86.477	Oreochromis_niloticus
ENSPMGG00000014877	chd6	85	74.824	ENSOANG00000014347	CHD6	62	74.543	Ornithorhynchus_anatinus
ENSPMGG00000014877	chd6	82	76.458	ENSOCUG00000012394	CHD6	72	76.190	Oryctolagus_cuniculus
ENSPMGG00000014877	chd6	92	77.989	ENSORLG00020021891	chd6	95	93.988	Oryzias_latipes_hni
ENSPMGG00000014877	chd6	88	76.546	ENSOGAG00000002427	CHD6	77	76.278	Otolemur_garnettii
ENSPMGG00000014877	chd6	89	75.678	ENSOARG00000002597	CHD6	77	75.641	Ovis_aries
ENSPMGG00000014877	chd6	84	75.378	ENSPPRG00000014756	CHD6	75	76.562	Panthera_pardus
ENSPMGG00000014877	chd6	84	75.172	ENSPTIG00000011094	CHD6	74	76.349	Panthera_tigris_altaica
ENSPMGG00000014877	chd6	88	77.243	ENSPTRG00000013504	CHD6	99	82.202	Pan_troglodytes
ENSPMGG00000014877	chd6	86	76.989	ENSPANG00000025554	CHD6	99	82.202	Papio_anubis
ENSPMGG00000014877	chd6	86	79.459	ENSPKIG00000005578	chd6	76	80.014	Paramormyrops_kingsleyae
ENSPMGG00000014877	chd6	86	75.017	ENSPCIG00000028037	CHD6	77	76.487	Phascolarctos_cinereus
ENSPMGG00000014877	chd6	96	89.338	ENSPLAG00000003128	chd6	79	80.272	Poecilia_latipinna
ENSPMGG00000014877	chd6	94	89.474	ENSPREG00000022653	chd6	99	94.128	Poecilia_reticulata
ENSPMGG00000014877	chd6	86	76.671	ENSPPYG00000011016	CHD6	75	76.458	Pongo_abelii
ENSPMGG00000014877	chd6	88	76.671	ENSPCOG00000001089	CHD6	99	82.202	Propithecus_coquereli
ENSPMGG00000014877	chd6	91	84.476	ENSPNYG00000022516	chd6	85	84.432	Pundamilia_nyererei
ENSPMGG00000014877	chd6	86	75.584	ENSPNAG00000012825	chd6	76	75.584	Pygocentrus_nattereri
ENSPMGG00000014877	chd6	84	74.878	ENSRNOG00000016744	Chd6	73	76.060	Rattus_norvegicus
ENSPMGG00000014877	chd6	88	77.022	ENSSBOG00000022089	CHD6	99	82.202	Saimiri_boliviensis_boliviensis
ENSPMGG00000014877	chd6	86	75.447	ENSSHAG00000017072	CHD6	77	76.901	Sarcophilus_harrisii
ENSPMGG00000014877	chd6	90	76.893	ENSSFOG00015012920	chd6	77	77.985	Scleropages_formosus
ENSPMGG00000014877	chd6	57	92.157	ENSSARG00000002615	-	50	92.157	Sorex_araneus
ENSPMGG00000014877	chd6	90	77.184	ENSSSCG00000007360	CHD6	77	77.217	Sus_scrofa
ENSPMGG00000014877	chd6	94	70.186	ENSTGUG00000003179	CHD6	84	70.062	Taeniopygia_guttata
ENSPMGG00000014877	chd6	91	78.755	ENSTNIG00000017487	chd6	92	79.459	Tetraodon_nigroviridis
ENSPMGG00000014877	chd6	87	79.245	ENSTTRG00000013438	CHD6	72	82.401	Tursiops_truncatus
ENSPMGG00000014877	chd6	88	74.618	ENSUAMG00000024036	CHD6	95	84.749	Ursus_americanus
ENSPMGG00000014877	chd6	84	76.025	ENSUMAG00000002017	CHD6	95	84.749	Ursus_maritimus
ENSPMGG00000014877	chd6	76	82.623	ENSVPAG00000007941	CHD6	64	82.623	Vicugna_pacos
ENSPMGG00000014877	chd6	88	75.275	ENSVVUG00000029164	CHD6	76	76.349	Vulpes_vulpes
ENSPMGG00000014877	chd6	84	69.320	ENSXETG00000021445	chd6	73	69.320	Xenopus_tropicalis