EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000014950 (Gene tree)
Gene ID: -
Gene Symbol: rpusd1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 1305 bases
Position: chrKN465588.1:97412-98716
Accession: ZDB-GENE-060929-444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000018299	PseudoU_synth_2	PF00849.22	1.1e-24	1	1
ENSPMGP00000018297	PseudoU_synth_2	PF00849.22	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000019518	-	927	-	ENSPMGP00000018297	308 (aa)	-	-
ENSPMGT00000019520	-	882	-	ENSPMGP00000018299	293 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000014950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000014950's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000014950	rpusd1	98	56.721	ENSG00000007376	RPUSD1	99	65.269	Homo_sapiens
ENSPMGG00000014950	rpusd1	99	74.593	ENSAPOG00000022221	rpusd1	99	74.675	Acanthochromis_polyacanthus
ENSPMGG00000014950	rpusd1	99	58.054	ENSAMEG00000007461	RPUSD1	99	58.054	Ailuropoda_melanoleuca
ENSPMGG00000014950	rpusd1	99	71.935	ENSACIG00000015863	rpusd1	100	72.903	Amphilophus_citrinellus
ENSPMGG00000014950	rpusd1	99	74.110	ENSAOCG00000021975	rpusd1	97	75.081	Amphiprion_ocellaris
ENSPMGG00000014950	rpusd1	99	74.434	ENSAPEG00000001316	rpusd1	97	75.405	Amphiprion_percula
ENSPMGG00000014950	rpusd1	99	73.463	ENSATEG00000002984	rpusd1	99	73.463	Anabas_testudineus
ENSPMGG00000014950	rpusd1	77	57.741	ENSAPLG00000012316	RPUSD1	98	58.228	Anas_platyrhynchos
ENSPMGG00000014950	rpusd1	99	64.548	ENSACAG00000008953	RPUSD1	99	64.548	Anolis_carolinensis
ENSPMGG00000014950	rpusd1	98	56.721	ENSANAG00000024709	RPUSD1	98	56.721	Aotus_nancymaae
ENSPMGG00000014950	rpusd1	99	70.096	ENSACLG00000013692	rpusd1	100	70.740	Astatotilapia_calliptera
ENSPMGG00000014950	rpusd1	98	66.781	ENSAMXG00000019802	rpusd1	99	66.781	Astyanax_mexicanus
ENSPMGG00000014950	rpusd1	98	58.416	ENSBTAG00000000179	RPUSD1	98	58.416	Bos_taurus
ENSPMGG00000014950	rpusd1	98	56.066	ENSCJAG00000012253	RPUSD1	98	56.393	Callithrix_jacchus
ENSPMGG00000014950	rpusd1	97	58.844	ENSCAFG00000019614	RPUSD1	97	58.844	Canis_familiaris
ENSPMGG00000014950	rpusd1	97	58.844	ENSCAFG00020008891	RPUSD1	97	58.844	Canis_lupus_dingo
ENSPMGG00000014950	rpusd1	98	58.553	ENSCHIG00000012872	RPUSD1	98	59.136	Capra_hircus
ENSPMGG00000014950	rpusd1	98	57.288	ENSTSYG00000036934	RPUSD1	98	57.288	Carlito_syrichta
ENSPMGG00000014950	rpusd1	98	58.528	ENSCAPG00000014219	RPUSD1	98	58.528	Cavia_aperea
ENSPMGG00000014950	rpusd1	98	58.528	ENSCPOG00000034604	RPUSD1	98	58.528	Cavia_porcellus
ENSPMGG00000014950	rpusd1	98	57.049	ENSCCAG00000034385	RPUSD1	98	57.049	Cebus_capucinus
ENSPMGG00000014950	rpusd1	98	56.721	ENSCATG00000042983	RPUSD1	98	56.721	Cercocebus_atys
ENSPMGG00000014950	rpusd1	98	57.860	ENSCLAG00000013966	RPUSD1	98	57.860	Chinchilla_lanigera
ENSPMGG00000014950	rpusd1	98	56.721	ENSCSAG00000012121	RPUSD1	98	56.721	Chlorocebus_sabaeus
ENSPMGG00000014950	rpusd1	98	62.252	ENSCPBG00000021101	RPUSD1	99	61.667	Chrysemys_picta_bellii
ENSPMGG00000014950	rpusd1	86	62.992	ENSCANG00000028576	RPUSD1	90	63.241	Colobus_angolensis_palliatus
ENSPMGG00000014950	rpusd1	99	57.525	ENSCGRG00001014253	Rpusd1	99	57.525	Cricetulus_griseus_chok1gshd
ENSPMGG00000014950	rpusd1	99	57.525	ENSCGRG00000017995	Rpusd1	99	57.525	Cricetulus_griseus_crigri
ENSPMGG00000014950	rpusd1	98	74.570	ENSCSEG00000018512	rpusd1	99	74.570	Cynoglossus_semilaevis
ENSPMGG00000014950	rpusd1	99	75.000	ENSCVAG00000022746	rpusd1	100	74.675	Cyprinodon_variegatus
ENSPMGG00000014950	rpusd1	99	70.205	ENSDARG00000060192	rpusd1	99	70.205	Danio_rerio
ENSPMGG00000014950	rpusd1	99	54.605	ENSDNOG00000003721	RPUSD1	98	55.482	Dasypus_novemcinctus
ENSPMGG00000014950	rpusd1	99	56.856	ENSDORG00000026656	Rpusd1	98	57.432	Dipodomys_ordii
ENSPMGG00000014950	rpusd1	97	47.771	ENSEBUG00000008767	rpusd1	93	47.712	Eptatretus_burgeri
ENSPMGG00000014950	rpusd1	98	55.305	ENSEASG00005018421	RPUSD1	74	55.305	Equus_asinus_asinus
ENSPMGG00000014950	rpusd1	99	66.340	ENSELUG00000014307	rpusd1	89	67.647	Esox_lucius
ENSPMGG00000014950	rpusd1	99	57.047	ENSFCAG00000010359	RPUSD1	99	57.047	Felis_catus
ENSPMGG00000014950	rpusd1	99	62.500	ENSFALG00000003211	RPUSD1	99	62.500	Ficedula_albicollis
ENSPMGG00000014950	rpusd1	98	58.194	ENSFDAG00000013398	RPUSD1	98	58.194	Fukomys_damarensis
ENSPMGG00000014950	rpusd1	99	75.244	ENSFHEG00000004736	rpusd1	100	75.244	Fundulus_heteroclitus
ENSPMGG00000014950	rpusd1	99	72.313	ENSGMOG00000010756	rpusd1	99	72.964	Gadus_morhua
ENSPMGG00000014950	rpusd1	99	63.576	ENSGALG00000005315	RPUSD1	99	63.576	Gallus_gallus
ENSPMGG00000014950	rpusd1	99	74.026	ENSGAFG00000009886	rpusd1	100	73.355	Gambusia_affinis
ENSPMGG00000014950	rpusd1	99	71.521	ENSGACG00000014276	rpusd1	100	73.463	Gasterosteus_aculeatus
ENSPMGG00000014950	rpusd1	98	61.921	ENSGAGG00000004181	RPUSD1	99	61.258	Gopherus_agassizii
ENSPMGG00000014950	rpusd1	99	57.143	ENSGGOG00000013997	RPUSD1	99	57.143	Gorilla_gorilla
ENSPMGG00000014950	rpusd1	99	70.418	ENSHBUG00000023728	rpusd1	100	71.061	Haplochromis_burtoni
ENSPMGG00000014950	rpusd1	98	57.860	ENSHGLG00000002595	RPUSD1	98	57.860	Heterocephalus_glaber_female
ENSPMGG00000014950	rpusd1	98	57.860	ENSHGLG00100014303	RPUSD1	98	57.860	Heterocephalus_glaber_male
ENSPMGG00000014950	rpusd1	98	73.611	ENSHCOG00000002390	rpusd1	99	73.611	Hippocampus_comes
ENSPMGG00000014950	rpusd1	97	65.552	ENSIPUG00000001570	rpusd1	98	65.541	Ictalurus_punctatus
ENSPMGG00000014950	rpusd1	98	57.860	ENSSTOG00000004276	RPUSD1	98	57.860	Ictidomys_tridecemlineatus
ENSPMGG00000014950	rpusd1	99	56.436	ENSJJAG00000015696	Rpusd1	98	57.426	Jaculus_jaculus
ENSPMGG00000014950	rpusd1	99	73.770	ENSKMAG00000017287	rpusd1	100	74.351	Kryptolebias_marmoratus
ENSPMGG00000014950	rpusd1	99	73.786	ENSLBEG00000013354	RPUSD1	99	74.110	Labrus_bergylta
ENSPMGG00000014950	rpusd1	99	73.786	ENSLBEG00000022502	rpusd1	99	74.110	Labrus_bergylta
ENSPMGG00000014950	rpusd1	98	63.087	ENSLACG00000008869	RPUSD1	99	63.087	Latimeria_chalumnae
ENSPMGG00000014950	rpusd1	74	79.167	ENSLOCG00000005682	rpusd1	99	79.167	Lepisosteus_oculatus
ENSPMGG00000014950	rpusd1	98	57.627	ENSLAFG00000002115	RPUSD1	98	57.627	Loxodonta_africana
ENSPMGG00000014950	rpusd1	98	56.721	ENSMFAG00000003961	RPUSD1	98	56.721	Macaca_fascicularis
ENSPMGG00000014950	rpusd1	98	56.721	ENSMMUG00000000842	RPUSD1	98	56.721	Macaca_mulatta
ENSPMGG00000014950	rpusd1	98	56.721	ENSMNEG00000042712	RPUSD1	98	56.721	Macaca_nemestrina
ENSPMGG00000014950	rpusd1	98	56.721	ENSMLEG00000030591	RPUSD1	98	56.721	Mandrillus_leucophaeus
ENSPMGG00000014950	rpusd1	99	76.129	ENSMAMG00000004735	rpusd1	99	76.774	Mastacembelus_armatus
ENSPMGG00000014950	rpusd1	99	70.096	ENSMZEG00005003214	rpusd1	100	70.740	Maylandia_zebra
ENSPMGG00000014950	rpusd1	97	63.087	ENSMGAG00000005447	RPUSD1	99	63.087	Meleagris_gallopavo
ENSPMGG00000014950	rpusd1	85	56.746	ENSMAUG00000019998	Rpusd1	96	56.746	Mesocricetus_auratus
ENSPMGG00000014950	rpusd1	98	57.667	ENSMICG00000017561	RPUSD1	98	57.667	Microcebus_murinus
ENSPMGG00000014950	rpusd1	99	58.278	ENSMOCG00000014082	Rpusd1	99	58.278	Microtus_ochrogaster
ENSPMGG00000014950	rpusd1	99	74.098	ENSMMOG00000012569	rpusd1	99	74.740	Mola_mola
ENSPMGG00000014950	rpusd1	99	61.716	ENSMODG00000016882	RPUSD1	97	62.542	Monodelphis_domestica
ENSPMGG00000014950	rpusd1	99	74.516	ENSMALG00000017818	rpusd1	99	74.839	Monopterus_albus
ENSPMGG00000014950	rpusd1	99	58.278	MGP_CAROLIEiJ_G0021244	Rpusd1	98	58.528	Mus_caroli
ENSPMGG00000014950	rpusd1	98	58.528	ENSMUSG00000041199	Rpusd1	98	58.528	Mus_musculus
ENSPMGG00000014950	rpusd1	99	56.818	MGP_PahariEiJ_G0023562	Rpusd1	99	57.143	Mus_pahari
ENSPMGG00000014950	rpusd1	98	58.528	MGP_SPRETEiJ_G0022155	Rpusd1	98	58.528	Mus_spretus
ENSPMGG00000014950	rpusd1	97	56.997	ENSMPUG00000015897	RPUSD1	97	56.997	Mustela_putorius_furo
ENSPMGG00000014950	rpusd1	99	56.352	ENSMLUG00000001089	RPUSD1	99	56.678	Myotis_lucifugus
ENSPMGG00000014950	rpusd1	99	57.616	ENSNGAG00000003595	Rpusd1	98	57.860	Nannospalax_galili
ENSPMGG00000014950	rpusd1	99	72.964	ENSNBRG00000006457	rpusd1	100	73.826	Neolamprologus_brichardi
ENSPMGG00000014950	rpusd1	54	48.521	ENSNLEG00000008424	-	97	48.521	Nomascus_leucogenys
ENSPMGG00000014950	rpusd1	97	63.014	ENSMEUG00000016049	RPUSD1	97	63.014	Notamacropus_eugenii
ENSPMGG00000014950	rpusd1	99	50.508	ENSOPRG00000008340	RPUSD1	99	50.508	Ochotona_princeps
ENSPMGG00000014950	rpusd1	98	58.194	ENSODEG00000016945	RPUSD1	98	58.194	Octodon_degus
ENSPMGG00000014950	rpusd1	99	72.078	ENSONIG00000015672	rpusd1	100	73.701	Oreochromis_niloticus
ENSPMGG00000014950	rpusd1	99	71.096	ENSORLG00000013009	rpusd1	99	71.096	Oryzias_latipes
ENSPMGG00000014950	rpusd1	99	71.096	ENSORLG00020010382	rpusd1	99	71.096	Oryzias_latipes_hni
ENSPMGG00000014950	rpusd1	99	70.432	ENSORLG00015021354	rpusd1	99	70.432	Oryzias_latipes_hsok
ENSPMGG00000014950	rpusd1	99	70.395	ENSOMEG00000021426	rpusd1	99	70.432	Oryzias_melastigma
ENSPMGG00000014950	rpusd1	98	56.536	ENSOGAG00000003795	RPUSD1	98	56.536	Otolemur_garnettii
ENSPMGG00000014950	rpusd1	98	58.746	ENSOARG00000014254	RPUSD1	98	58.746	Ovis_aries
ENSPMGG00000014950	rpusd1	98	57.049	ENSPPAG00000034797	RPUSD1	98	57.049	Pan_paniscus
ENSPMGG00000014950	rpusd1	99	57.047	ENSPPRG00000012389	RPUSD1	99	57.047	Panthera_pardus
ENSPMGG00000014950	rpusd1	98	57.239	ENSPTIG00000008545	RPUSD1	77	71.287	Panthera_tigris_altaica
ENSPMGG00000014950	rpusd1	98	57.049	ENSPTRG00000007565	RPUSD1	98	57.049	Pan_troglodytes
ENSPMGG00000014950	rpusd1	98	56.721	ENSPANG00000024401	RPUSD1	98	56.721	Papio_anubis
ENSPMGG00000014950	rpusd1	99	68.197	ENSPKIG00000018890	rpusd1	91	68.197	Paramormyrops_kingsleyae
ENSPMGG00000014950	rpusd1	99	62.500	ENSPSIG00000013945	RPUSD1	99	62.171	Pelodiscus_sinensis
ENSPMGG00000014950	rpusd1	98	57.525	ENSPEMG00000000497	Rpusd1	98	57.525	Peromyscus_maniculatus_bairdii
ENSPMGG00000014950	rpusd1	99	51.803	ENSPMAG00000001563	rpusd1	99	50.987	Petromyzon_marinus
ENSPMGG00000014950	rpusd1	99	63.123	ENSPCIG00000021216	-	93	63.123	Phascolarctos_cinereus
ENSPMGG00000014950	rpusd1	99	74.919	ENSPFOG00000007946	rpusd1	100	74.919	Poecilia_formosa
ENSPMGG00000014950	rpusd1	99	75.244	ENSPLAG00000011925	rpusd1	100	75.244	Poecilia_latipinna
ENSPMGG00000014950	rpusd1	99	74.919	ENSPMEG00000002910	rpusd1	100	74.919	Poecilia_mexicana
ENSPMGG00000014950	rpusd1	99	75.325	ENSPREG00000019851	rpusd1	100	75.325	Poecilia_reticulata
ENSPMGG00000014950	rpusd1	98	44.558	ENSPCAG00000002258	RPUSD1	98	44.558	Procavia_capensis
ENSPMGG00000014950	rpusd1	98	56.209	ENSPCOG00000022582	RPUSD1	98	56.209	Propithecus_coquereli
ENSPMGG00000014950	rpusd1	98	53.922	ENSPVAG00000013104	RPUSD1	98	53.922	Pteropus_vampyrus
ENSPMGG00000014950	rpusd1	99	74.315	ENSPNYG00000024076	rpusd1	100	74.315	Pundamilia_nyererei
ENSPMGG00000014950	rpusd1	98	65.986	ENSPNAG00000013806	rpusd1	99	65.986	Pygocentrus_nattereri
ENSPMGG00000014950	rpusd1	99	57.049	ENSRNOG00000023639	Rpusd1	99	57.049	Rattus_norvegicus
ENSPMGG00000014950	rpusd1	98	56.721	ENSRBIG00000030238	RPUSD1	98	56.721	Rhinopithecus_bieti
ENSPMGG00000014950	rpusd1	98	56.721	ENSRROG00000036663	RPUSD1	98	56.721	Rhinopithecus_roxellana
ENSPMGG00000014950	rpusd1	98	57.627	ENSSBOG00000033063	RPUSD1	98	57.966	Saimiri_boliviensis_boliviensis
ENSPMGG00000014950	rpusd1	97	62.373	ENSSHAG00000013500	RPUSD1	97	62.373	Sarcophilus_harrisii
ENSPMGG00000014950	rpusd1	98	69.360	ENSSFOG00015014394	rpusd1	99	69.360	Scleropages_formosus
ENSPMGG00000014950	rpusd1	99	74.434	ENSSMAG00000008045	rpusd1	93	74.110	Scophthalmus_maximus
ENSPMGG00000014950	rpusd1	86	82.609	ENSSDUG00000001829	rpusd1	97	74.757	Seriola_dumerili
ENSPMGG00000014950	rpusd1	86	82.609	ENSSLDG00000020853	rpusd1	97	74.757	Seriola_lalandi_dorsalis
ENSPMGG00000014950	rpusd1	56	70.060	ENSSARG00000011187	-	100	70.060	Sorex_araneus
ENSPMGG00000014950	rpusd1	63	59.585	ENSSPUG00000005119	-	99	59.788	Sphenodon_punctatus
ENSPMGG00000014950	rpusd1	99	76.052	ENSSPAG00000012708	rpusd1	99	76.699	Stegastes_partitus
ENSPMGG00000014950	rpusd1	98	56.863	ENSSSCG00000008000	RPUSD1	98	62.598	Sus_scrofa
ENSPMGG00000014950	rpusd1	86	68.651	ENSTGUG00000015375	RPUSD1	99	68.651	Taeniopygia_guttata
ENSPMGG00000014950	rpusd1	99	73.139	ENSTRUG00000003041	rpusd1	99	73.786	Takifugu_rubripes
ENSPMGG00000014950	rpusd1	99	71.626	ENSTNIG00000002660	rpusd1	99	71.626	Tetraodon_nigroviridis
ENSPMGG00000014950	rpusd1	99	57.468	ENSTTRG00000010167	RPUSD1	98	57.980	Tursiops_truncatus
ENSPMGG00000014950	rpusd1	97	58.503	ENSUAMG00000012736	RPUSD1	97	58.503	Ursus_americanus
ENSPMGG00000014950	rpusd1	97	58.503	ENSUMAG00000021174	RPUSD1	97	58.503	Ursus_maritimus
ENSPMGG00000014950	rpusd1	97	58.163	ENSVVUG00000012357	RPUSD1	97	58.163	Vulpes_vulpes
ENSPMGG00000014950	rpusd1	98	62.034	ENSXETG00000007184	rpusd1	98	62.034	Xenopus_tropicalis
ENSPMGG00000014950	rpusd1	99	74.351	ENSXCOG00000017930	rpusd1	100	73.684	Xiphophorus_couchianus
ENSPMGG00000014950	rpusd1	99	74.675	ENSXMAG00000024084	rpusd1	100	74.013	Xiphophorus_maculatus