EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000015135 (Gene tree)
Gene ID: -
Gene Symbol: pspc1
Alias: -
Full Name: paraspeckle component 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 4125 bases
Position: chrKN467651.1:165802-169926
Accession: ZDB-GENE-030131-9530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000018555	RRM_1	PF00076.22	5.4e-28	1	2
ENSPMGP00000018555	RRM_1	PF00076.22	5.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000019793	-	1089	-	ENSPMGP00000018555	362 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000015135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000015135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000015135	pspc1	80	73.611	ENSG00000121390	PSPC1	78	70.476	Homo_sapiens
ENSPMGG00000015135	pspc1	98	74.576	ENSAPOG00000015946	pspc1	77	73.636	Acanthochromis_polyacanthus
ENSPMGG00000015135	pspc1	86	70.382	ENSAMEG00000017420	PSPC1	59	70.476	Ailuropoda_melanoleuca
ENSPMGG00000015135	pspc1	91	72.205	ENSACIG00000018695	pspc1	66	72.205	Amphilophus_citrinellus
ENSPMGG00000015135	pspc1	98	74.859	ENSAOCG00000005279	pspc1	76	73.795	Amphiprion_ocellaris
ENSPMGG00000015135	pspc1	98	74.859	ENSAPEG00000015927	pspc1	76	73.795	Amphiprion_percula
ENSPMGG00000015135	pspc1	91	71.386	ENSATEG00000004878	pspc1	64	71.687	Anabas_testudineus
ENSPMGG00000015135	pspc1	63	76.419	ENSAPLG00000006246	PSPC1	57	76.190	Anas_platyrhynchos
ENSPMGG00000015135	pspc1	79	67.133	ENSAPLG00000003643	SFPQ	55	67.133	Anas_platyrhynchos
ENSPMGG00000015135	pspc1	84	70.957	ENSACAG00000002093	PSPC1	58	70.096	Anolis_carolinensis
ENSPMGG00000015135	pspc1	87	70.476	ENSANAG00000000059	PSPC1	82	69.018	Aotus_nancymaae
ENSPMGG00000015135	pspc1	92	71.471	ENSACLG00000027220	pspc1	69	71.471	Astatotilapia_calliptera
ENSPMGG00000015135	pspc1	98	65.634	ENSAMXG00000036881	pspc1	66	66.759	Astyanax_mexicanus
ENSPMGG00000015135	pspc1	83	72.000	ENSBTAG00000003934	PSPC1	58	72.093	Bos_taurus
ENSPMGG00000015135	pspc1	86	70.382	ENSCJAG00000004554	PSPC1	59	70.476	Callithrix_jacchus
ENSPMGG00000015135	pspc1	80	73.611	ENSCAFG00020002009	PSPC1	82	69.018	Canis_lupus_dingo
ENSPMGG00000015135	pspc1	83	72.000	ENSCHIG00000016708	PSPC1	58	72.093	Capra_hircus
ENSPMGG00000015135	pspc1	80	73.611	ENSCPOG00000000395	PSPC1	79	70.382	Cavia_porcellus
ENSPMGG00000015135	pspc1	86	70.382	ENSCCAG00000033498	PSPC1	59	70.476	Cebus_capucinus
ENSPMGG00000015135	pspc1	80	73.611	ENSCATG00000036434	PSPC1	85	70.064	Cercocebus_atys
ENSPMGG00000015135	pspc1	62	76.991	ENSCLAG00000005241	PSPC1	51	77.093	Chinchilla_lanigera
ENSPMGG00000015135	pspc1	86	69.551	ENSCHOG00000008913	PSPC1	58	69.649	Choloepus_hoffmanni
ENSPMGG00000015135	pspc1	82	71.141	ENSCPBG00000020859	PSPC1	57	71.000	Chrysemys_picta_bellii
ENSPMGG00000015135	pspc1	78	54.930	ENSCSAVG00000003533	-	54	54.930	Ciona_savignyi
ENSPMGG00000015135	pspc1	62	76.991	ENSCANG00000018948	PSPC1	75	77.093	Colobus_angolensis_palliatus
ENSPMGG00000015135	pspc1	85	71.383	ENSCGRG00001018368	Pspc1	59	71.474	Cricetulus_griseus_chok1gshd
ENSPMGG00000015135	pspc1	85	71.383	ENSCGRG00000011724	Pspc1	59	71.474	Cricetulus_griseus_crigri
ENSPMGG00000015135	pspc1	52	59.043	ENSCSEG00000008899	-	94	59.043	Cynoglossus_semilaevis
ENSPMGG00000015135	pspc1	98	68.539	ENSCVAG00000007679	-	69	69.359	Cyprinodon_variegatus
ENSPMGG00000015135	pspc1	87	70.159	ENSDARG00000006621	pspc1	57	77.533	Danio_rerio
ENSPMGG00000015135	pspc1	80	73.611	ENSDNOG00000011078	PSPC1	59	71.019	Dasypus_novemcinctus
ENSPMGG00000015135	pspc1	85	67.846	ENSDORG00000016050	Pspc1	59	67.949	Dipodomys_ordii
ENSPMGG00000015135	pspc1	81	43.963	ENSEBUG00000010133	pspc1	76	45.548	Eptatretus_burgeri
ENSPMGG00000015135	pspc1	86	65.273	ENSEBUG00000003964	-	64	59.066	Eptatretus_burgeri
ENSPMGG00000015135	pspc1	80	73.611	ENSEASG00005000119	PSPC1	79	69.745	Equus_asinus_asinus
ENSPMGG00000015135	pspc1	80	73.611	ENSECAG00000017286	PSPC1	79	69.745	Equus_caballus
ENSPMGG00000015135	pspc1	72	63.077	ENSEEUG00000011288	-	53	61.594	Erinaceus_europaeus
ENSPMGG00000015135	pspc1	98	65.546	ENSELUG00000003746	pspc1	86	65.833	Esox_lucius
ENSPMGG00000015135	pspc1	80	73.611	ENSFCAG00000027841	PSPC1	82	69.018	Felis_catus
ENSPMGG00000015135	pspc1	83	71.429	ENSFALG00000008750	PSPC1	60	69.841	Ficedula_albicollis
ENSPMGG00000015135	pspc1	86	69.649	ENSFDAG00000002617	PSPC1	61	69.745	Fukomys_damarensis
ENSPMGG00000015135	pspc1	80	73.702	ENSGMOG00000015074	pspc1	70	64.067	Gadus_morhua
ENSPMGG00000015135	pspc1	79	73.519	ENSGALG00000017142	PSPC1	59	70.550	Gallus_gallus
ENSPMGG00000015135	pspc1	98	71.629	ENSGAFG00000006327	pspc1	73	71.866	Gambusia_affinis
ENSPMGG00000015135	pspc1	98	66.947	ENSGACG00000014901	pspc1	87	74.920	Gasterosteus_aculeatus
ENSPMGG00000015135	pspc1	82	71.141	ENSGAGG00000019164	PSPC1	57	71.000	Gopherus_agassizii
ENSPMGG00000015135	pspc1	80	73.611	ENSGGOG00000003414	PSPC1	78	70.476	Gorilla_gorilla
ENSPMGG00000015135	pspc1	98	73.876	ENSHBUG00000001139	pspc1	69	74.095	Haplochromis_burtoni
ENSPMGG00000015135	pspc1	86	70.288	ENSHGLG00000018811	PSPC1	59	70.382	Heterocephalus_glaber_female
ENSPMGG00000015135	pspc1	86	69.524	ENSHGLG00100007962	PSPC1	96	69.524	Heterocephalus_glaber_male
ENSPMGG00000015135	pspc1	89	73.209	ENSHCOG00000013251	pspc1	78	68.750	Hippocampus_comes
ENSPMGG00000015135	pspc1	98	68.258	ENSIPUG00000013192	pspc1	71	66.022	Ictalurus_punctatus
ENSPMGG00000015135	pspc1	86	70.288	ENSSTOG00000026833	PSPC1	78	70.382	Ictidomys_tridecemlineatus
ENSPMGG00000015135	pspc1	80	73.611	ENSJJAG00000018334	Pspc1	59	69.745	Jaculus_jaculus
ENSPMGG00000015135	pspc1	99	61.389	ENSKMAG00000013525	-	84	62.983	Kryptolebias_marmoratus
ENSPMGG00000015135	pspc1	94	71.429	ENSLBEG00000004474	pspc1	74	71.552	Labrus_bergylta
ENSPMGG00000015135	pspc1	78	74.468	ENSLACG00000010762	PSPC1	55	73.702	Latimeria_chalumnae
ENSPMGG00000015135	pspc1	86	73.163	ENSLOCG00000010832	pspc1	62	73.418	Lepisosteus_oculatus
ENSPMGG00000015135	pspc1	80	73.611	ENSLAFG00000010968	PSPC1	55	73.702	Loxodonta_africana
ENSPMGG00000015135	pspc1	80	73.611	ENSMFAG00000032728	PSPC1	86	70.476	Macaca_fascicularis
ENSPMGG00000015135	pspc1	80	73.611	ENSMMUG00000020262	PSPC1	83	70.476	Macaca_mulatta
ENSPMGG00000015135	pspc1	80	73.611	ENSMNEG00000027401	PSPC1	66	70.476	Macaca_nemestrina
ENSPMGG00000015135	pspc1	62	76.991	ENSMLEG00000039043	PSPC1	53	77.093	Mandrillus_leucophaeus
ENSPMGG00000015135	pspc1	98	72.753	ENSMAMG00000004333	pspc1	67	72.207	Mastacembelus_armatus
ENSPMGG00000015135	pspc1	92	71.471	ENSMZEG00005005726	pspc1	69	71.471	Maylandia_zebra
ENSPMGG00000015135	pspc1	64	76.190	ENSMGAG00000015134	PSPC1	57	75.966	Meleagris_gallopavo
ENSPMGG00000015135	pspc1	84	63.804	ENSMAUG00000021067	Pspc1	62	69.611	Mesocricetus_auratus
ENSPMGG00000015135	pspc1	83	70.820	ENSMICG00000013970	PSPC1	84	67.584	Microcebus_murinus
ENSPMGG00000015135	pspc1	86	69.968	ENSMOCG00000006060	Pspc1	59	71.154	Microtus_ochrogaster
ENSPMGG00000015135	pspc1	75	58.824	ENSMMOG00000004352	pspc1	55	55.298	Mola_mola
ENSPMGG00000015135	pspc1	86	70.096	ENSMODG00000008029	PSPC1	50	70.064	Monodelphis_domestica
ENSPMGG00000015135	pspc1	98	69.944	ENSMALG00000008914	pspc1	69	70.637	Monopterus_albus
ENSPMGG00000015135	pspc1	86	69.968	MGP_CAROLIEiJ_G0019341	Pspc1	81	61.702	Mus_caroli
ENSPMGG00000015135	pspc1	86	69.968	ENSMUSG00000021938	Pspc1	80	61.702	Mus_musculus
ENSPMGG00000015135	pspc1	86	69.968	MGP_PahariEiJ_G0030359	Pspc1	81	61.702	Mus_pahari
ENSPMGG00000015135	pspc1	86	69.968	MGP_SPRETEiJ_G0020232	Pspc1	81	61.702	Mus_spretus
ENSPMGG00000015135	pspc1	80	73.611	ENSMPUG00000013347	PSPC1	61	69.018	Mustela_putorius_furo
ENSPMGG00000015135	pspc1	80	72.509	ENSMLUG00000017663	PSPC1	61	67.988	Myotis_lucifugus
ENSPMGG00000015135	pspc1	86	69.649	ENSNGAG00000011271	Pspc1	59	69.745	Nannospalax_galili
ENSPMGG00000015135	pspc1	92	71.687	ENSNBRG00000014059	pspc1	79	71.687	Neolamprologus_brichardi
ENSPMGG00000015135	pspc1	80	73.611	ENSNLEG00000001294	PSPC1	59	70.159	Nomascus_leucogenys
ENSPMGG00000015135	pspc1	72	62.357	ENSODEG00000007817	-	52	59.722	Octodon_degus
ENSPMGG00000015135	pspc1	78	70.213	ENSODEG00000019012	-	59	67.097	Octodon_degus
ENSPMGG00000015135	pspc1	98	74.157	ENSONIG00000012010	pspc1	68	74.373	Oreochromis_niloticus
ENSPMGG00000015135	pspc1	62	76.991	ENSOANG00000009017	-	57	77.093	Ornithorhynchus_anatinus
ENSPMGG00000015135	pspc1	82	60.738	ENSOANG00000011381	-	62	60.738	Ornithorhynchus_anatinus
ENSPMGG00000015135	pspc1	80	73.611	ENSOCUG00000006153	PSPC1	59	70.701	Oryctolagus_cuniculus
ENSPMGG00000015135	pspc1	98	68.732	ENSORLG00000004232	-	70	69.806	Oryzias_latipes
ENSPMGG00000015135	pspc1	98	68.732	ENSORLG00020000578	PSPC1	70	69.806	Oryzias_latipes_hni
ENSPMGG00000015135	pspc1	98	68.732	ENSORLG00015017480	pspc1	70	69.806	Oryzias_latipes_hsok
ENSPMGG00000015135	pspc1	59	81.604	ENSOMEG00000003779	pspc1	97	81.604	Oryzias_melastigma
ENSPMGG00000015135	pspc1	85	70.968	ENSOGAG00000012643	PSPC1	59	70.476	Otolemur_garnettii
ENSPMGG00000015135	pspc1	78	73.852	ENSOARG00000014163	PSPC1	58	73.852	Ovis_aries
ENSPMGG00000015135	pspc1	81	73.129	ENSPPAG00000009836	PSPC1	83	73.220	Pan_paniscus
ENSPMGG00000015135	pspc1	80	73.611	ENSPPRG00000008833	PSPC1	59	70.476	Panthera_pardus
ENSPMGG00000015135	pspc1	80	73.611	ENSPTRG00000005677	PSPC1	78	70.476	Pan_troglodytes
ENSPMGG00000015135	pspc1	80	73.611	ENSPANG00000001992	PSPC1	85	70.476	Papio_anubis
ENSPMGG00000015135	pspc1	98	67.507	ENSPKIG00000003578	pspc1	68	67.778	Paramormyrops_kingsleyae
ENSPMGG00000015135	pspc1	83	70.234	ENSPSIG00000005168	PSPC1	57	70.100	Pelodiscus_sinensis
ENSPMGG00000015135	pspc1	86	69.968	ENSPEMG00000015214	Pspc1	59	70.064	Peromyscus_maniculatus_bairdii
ENSPMGG00000015135	pspc1	80	43.051	ENSPMAG00000004618	pspc1	89	43.051	Petromyzon_marinus
ENSPMGG00000015135	pspc1	86	70.096	ENSPCIG00000017680	PSPC1	59	70.064	Phascolarctos_cinereus
ENSPMGG00000015135	pspc1	94	74.487	ENSPFOG00000003362	pspc1	66	74.709	Poecilia_formosa
ENSPMGG00000015135	pspc1	98	72.191	ENSPLAG00000011540	pspc1	69	72.423	Poecilia_latipinna
ENSPMGG00000015135	pspc1	98	72.191	ENSPMEG00000008322	pspc1	69	72.423	Poecilia_mexicana
ENSPMGG00000015135	pspc1	98	71.910	ENSPREG00000007786	pspc1	69	72.145	Poecilia_reticulata
ENSPMGG00000015135	pspc1	80	73.611	ENSPPYG00000005186	PSPC1	69	67.278	Pongo_abelii
ENSPMGG00000015135	pspc1	80	73.611	ENSPCOG00000014364	PSPC1	57	73.702	Propithecus_coquereli
ENSPMGG00000015135	pspc1	80	73.264	ENSPVAG00000005036	PSPC1	59	70.064	Pteropus_vampyrus
ENSPMGG00000015135	pspc1	92	71.171	ENSPNYG00000008893	pspc1	69	71.171	Pundamilia_nyererei
ENSPMGG00000015135	pspc1	80	76.389	ENSPNAG00000016511	pspc1	75	68.802	Pygocentrus_nattereri
ENSPMGG00000015135	pspc1	89	68.308	ENSRNOG00000020782	Pspc1	70	68.405	Rattus_norvegicus
ENSPMGG00000015135	pspc1	86	70.701	ENSRBIG00000036057	PSPC1	86	70.794	Rhinopithecus_bieti
ENSPMGG00000015135	pspc1	86	70.833	ENSRROG00000036334	PSPC1	78	70.794	Rhinopithecus_roxellana
ENSPMGG00000015135	pspc1	66	73.333	ENSSBOG00000028172	PSPC1	76	75.966	Saimiri_boliviensis_boliviensis
ENSPMGG00000015135	pspc1	84	65.017	ENSSHAG00000004696	PSPC1	54	67.361	Sarcophilus_harrisii
ENSPMGG00000015135	pspc1	79	77.700	ENSSFOG00015001395	pspc1	62	77.931	Scleropages_formosus
ENSPMGG00000015135	pspc1	98	71.866	ENSSMAG00000001761	pspc1	73	80.272	Scophthalmus_maximus
ENSPMGG00000015135	pspc1	98	71.549	ENSSDUG00000010651	pspc1	66	74.238	Seriola_dumerili
ENSPMGG00000015135	pspc1	91	69.697	ENSSLDG00000004284	pspc1	68	71.988	Seriola_lalandi_dorsalis
ENSPMGG00000015135	pspc1	72	71.923	ENSSARG00000000888	PSPC1	55	67.230	Sorex_araneus
ENSPMGG00000015135	pspc1	80	66.667	ENSSPUG00000008550	PSPC1	58	67.247	Sphenodon_punctatus
ENSPMGG00000015135	pspc1	98	76.056	ENSSPAG00000001921	pspc1	67	77.159	Stegastes_partitus
ENSPMGG00000015135	pspc1	80	73.264	ENSSSCG00000009569	PSPC1	79	70.740	Sus_scrofa
ENSPMGG00000015135	pspc1	79	73.519	ENSTGUG00000011295	PSPC1	62	73.356	Taeniopygia_guttata
ENSPMGG00000015135	pspc1	98	68.258	ENSTRUG00000011335	pspc1	69	68.524	Takifugu_rubripes
ENSPMGG00000015135	pspc1	98	66.854	ENSTNIG00000010358	pspc1	71	69.208	Tetraodon_nigroviridis
ENSPMGG00000015135	pspc1	85	63.107	ENSTBEG00000002361	PSPC1	59	63.226	Tupaia_belangeri
ENSPMGG00000015135	pspc1	87	69.206	ENSTTRG00000003343	PSPC1	60	69.304	Tursiops_truncatus
ENSPMGG00000015135	pspc1	87	70.476	ENSUAMG00000012309	PSPC1	91	69.018	Ursus_americanus
ENSPMGG00000015135	pspc1	86	70.064	ENSUMAG00000013993	PSPC1	86	70.159	Ursus_maritimus
ENSPMGG00000015135	pspc1	62	76.991	ENSVPAG00000010029	PSPC1	57	77.093	Vicugna_pacos
ENSPMGG00000015135	pspc1	80	73.611	ENSVVUG00000006414	PSPC1	83	69.018	Vulpes_vulpes
ENSPMGG00000015135	pspc1	98	71.910	ENSXCOG00000017438	pspc1	84	72.145	Xiphophorus_couchianus
ENSPMGG00000015135	pspc1	98	71.910	ENSXMAG00000007929	pspc1	84	72.145	Xiphophorus_maculatus