EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000016141 (Gene tree)
Gene ID: -
Gene Symbol: rif1
Alias: -
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 15106 bases
Position: chrKN461130.1:67225-82330
Accession: ZDB-GENE-030131-3406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000022065	Rif1_N	PF12231.8	5.3e-79	1	1
ENSPMGP00000022203	Rif1_N	PF12231.8	5.4e-79	1	1
ENSPMGP00000022031	Rif1_N	PF12231.8	6.6e-79	1	1
ENSPMGP00000022071	Rif1_N	PF12231.8	2e-78	1	1
ENSPMGP00000022194	Rif1_N	PF12231.8	2e-76	1	1
ENSPMGP00000022185	Rif1_N	PF12231.8	2e-76	1	1
ENSPMGP00000022189	Rif1_N	PF12231.8	3.2e-76	1	1
ENSPMGP00000022048	Rif1_N	PF12231.8	1.8e-75	1	1
ENSPMGP00000022046	Rif1_N	PF12231.8	1.9e-75	1	1
ENSPMGP00000022053	Rif1_N	PF12231.8	2e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000023488	-	5724	-	ENSPMGP00000022053	1907 (aa)	-	-
ENSPMGT00000023464	-	5952	-	ENSPMGP00000022031	1983 (aa)	-	-
ENSPMGT00000023637	-	5595	-	ENSPMGP00000022194	1864 (aa)	-	-
ENSPMGT00000023632	-	5619	-	ENSPMGP00000022189	1872 (aa)	-	-
ENSPMGT00000023646	-	5292	-	ENSPMGP00000022203	1763 (aa)	-	-
ENSPMGT00000023482	-	5751	-	ENSPMGP00000022048	1916 (aa)	-	-
ENSPMGT00000023628	-	5622	-	ENSPMGP00000022185	1873 (aa)	-	-
ENSPMGT00000023509	-	5766	-	ENSPMGP00000022071	1921 (aa)	-	-
ENSPMGT00000023502	-	5835	-	ENSPMGP00000022065	1944 (aa)	-	-
ENSPMGT00000023479	-	5826	-	ENSPMGP00000022046	1941 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000016141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000016141's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000016141	rif1	84	44.980	ENSG00000080345	RIF1	92	50.512	Homo_sapiens
ENSPMGG00000016141	rif1	91	63.352	ENSAPOG00000011073	rif1	76	62.200	Acanthochromis_polyacanthus
ENSPMGG00000016141	rif1	79	45.151	ENSAMEG00000008461	RIF1	66	45.927	Ailuropoda_melanoleuca
ENSPMGG00000016141	rif1	85	65.561	ENSACIG00000017765	rif1	76	64.963	Amphilophus_citrinellus
ENSPMGG00000016141	rif1	99	58.209	ENSAOCG00000017231	rif1	77	61.873	Amphiprion_ocellaris
ENSPMGG00000016141	rif1	90	67.125	ENSAPEG00000013228	rif1	77	65.483	Amphiprion_percula
ENSPMGG00000016141	rif1	95	64.403	ENSATEG00000022887	rif1	79	64.518	Anabas_testudineus
ENSPMGG00000016141	rif1	77	47.196	ENSAPLG00000007092	RIF1	70	47.390	Anas_platyrhynchos
ENSPMGG00000016141	rif1	81	44.393	ENSACAG00000003714	RIF1	69	44.590	Anolis_carolinensis
ENSPMGG00000016141	rif1	76	46.154	ENSANAG00000024840	RIF1	63	46.280	Aotus_nancymaae
ENSPMGG00000016141	rif1	89	55.004	ENSAMXG00000010910	rif1	70	62.893	Astyanax_mexicanus
ENSPMGG00000016141	rif1	71	45.009	ENSBTAG00000021020	RIF1	63	46.000	Bos_taurus
ENSPMGG00000016141	rif1	78	45.411	ENSCJAG00000003138	RIF1	65	46.737	Callithrix_jacchus
ENSPMGG00000016141	rif1	79	44.339	ENSCAFG00000005670	RIF1	63	45.244	Canis_familiaris
ENSPMGG00000016141	rif1	79	44.436	ENSCAFG00020016401	RIF1	66	45.244	Canis_lupus_dingo
ENSPMGG00000016141	rif1	78	46.011	ENSCHIG00000020327	RIF1	65	46.452	Capra_hircus
ENSPMGG00000016141	rif1	84	41.969	ENSTSYG00000008861	RIF1	69	43.537	Carlito_syrichta
ENSPMGG00000016141	rif1	63	42.444	ENSCAPG00000008957	RIF1	69	38.636	Cavia_aperea
ENSPMGG00000016141	rif1	71	55.714	ENSCPOG00000037898	RIF1	63	55.666	Cavia_porcellus
ENSPMGG00000016141	rif1	76	44.118	ENSCCAG00000024760	RIF1	63	44.118	Cebus_capucinus
ENSPMGG00000016141	rif1	82	45.210	ENSCATG00000033353	RIF1	66	46.386	Cercocebus_atys
ENSPMGG00000016141	rif1	68	62.469	ENSCLAG00000001517	RIF1	61	62.469	Chinchilla_lanigera
ENSPMGG00000016141	rif1	80	46.545	ENSCSAG00000016089	RIF1	66	46.545	Chlorocebus_sabaeus
ENSPMGG00000016141	rif1	74	50.220	ENSCHOG00000007187	RIF1	62	50.661	Choloepus_hoffmanni
ENSPMGG00000016141	rif1	93	41.877	ENSCPBG00000025885	RIF1	82	46.474	Chrysemys_picta_bellii
ENSPMGG00000016141	rif1	81	44.684	ENSCANG00000028962	RIF1	65	46.148	Colobus_angolensis_palliatus
ENSPMGG00000016141	rif1	77	44.391	ENSCGRG00001024589	Rif1	79	41.304	Cricetulus_griseus_chok1gshd
ENSPMGG00000016141	rif1	75	45.230	ENSCGRG00000010713	Rif1	79	41.304	Cricetulus_griseus_crigri
ENSPMGG00000016141	rif1	91	75.000	ENSCSEG00000003945	rif1	74	75.000	Cynoglossus_semilaevis
ENSPMGG00000016141	rif1	88	61.080	ENSCVAG00000022479	rif1	77	61.080	Cyprinodon_variegatus
ENSPMGG00000016141	rif1	81	59.938	ENSDARG00000062650	rif1	71	59.938	Danio_rerio
ENSPMGG00000016141	rif1	79	43.770	ENSDNOG00000011194	RIF1	63	44.947	Dasypus_novemcinctus
ENSPMGG00000016141	rif1	72	54.806	ENSETEG00000012421	RIF1	60	54.806	Echinops_telfairi
ENSPMGG00000016141	rif1	71	66.007	ENSEASG00005023434	RIF1	58	66.007	Equus_asinus_asinus
ENSPMGG00000016141	rif1	77	45.315	ENSECAG00000012679	RIF1	63	46.073	Equus_caballus
ENSPMGG00000016141	rif1	76	72.269	ENSELUG00000006826	rif1	59	71.717	Esox_lucius
ENSPMGG00000016141	rif1	79	45.347	ENSFCAG00000029742	RIF1	65	45.982	Felis_catus
ENSPMGG00000016141	rif1	66	47.143	ENSFALG00000013874	RIF1	65	47.278	Ficedula_albicollis
ENSPMGG00000016141	rif1	73	59.118	ENSFDAG00000006538	RIF1	63	59.118	Fukomys_damarensis
ENSPMGG00000016141	rif1	94	64.870	ENSFHEG00000013721	rif1	93	60.510	Fundulus_heteroclitus
ENSPMGG00000016141	rif1	78	64.444	ENSGMOG00000003517	rif1	99	64.444	Gadus_morhua
ENSPMGG00000016141	rif1	65	50.575	ENSGALG00000012484	RIF1	63	50.958	Gallus_gallus
ENSPMGG00000016141	rif1	92	66.350	ENSGAFG00000017196	rif1	99	58.345	Gambusia_affinis
ENSPMGG00000016141	rif1	84	71.250	ENSGACG00000008579	rif1	77	63.860	Gasterosteus_aculeatus
ENSPMGG00000016141	rif1	80	46.748	ENSGAGG00000012595	RIF1	79	45.833	Gopherus_agassizii
ENSPMGG00000016141	rif1	70	55.267	ENSGGOG00000040178	RIF1	57	54.962	Gorilla_gorilla
ENSPMGG00000016141	rif1	89	70.000	ENSHBUG00000007125	rif1	79	70.000	Haplochromis_burtoni
ENSPMGG00000016141	rif1	69	50.549	ENSHGLG00100009807	RIF1	61	50.549	Heterocephalus_glaber_male
ENSPMGG00000016141	rif1	93	56.638	ENSHCOG00000015943	rif1	72	57.200	Hippocampus_comes
ENSPMGG00000016141	rif1	98	52.767	ENSIPUG00000021703	rif1	75	61.465	Ictalurus_punctatus
ENSPMGG00000016141	rif1	85	45.118	ENSSTOG00000020712	RIF1	65	45.447	Ictidomys_tridecemlineatus
ENSPMGG00000016141	rif1	75	43.902	ENSJJAG00000023000	Rif1	68	43.598	Jaculus_jaculus
ENSPMGG00000016141	rif1	88	63.562	ENSKMAG00000002852	rif1	79	59.551	Kryptolebias_marmoratus
ENSPMGG00000016141	rif1	85	76.119	ENSLBEG00000023196	rif1	66	76.119	Labrus_bergylta
ENSPMGG00000016141	rif1	82	47.246	ENSLACG00000005425	RIF1	76	46.006	Latimeria_chalumnae
ENSPMGG00000016141	rif1	87	58.485	ENSLOCG00000002657	rif1	81	59.394	Lepisosteus_oculatus
ENSPMGG00000016141	rif1	75	46.645	ENSLAFG00000009796	RIF1	63	47.006	Loxodonta_africana
ENSPMGG00000016141	rif1	82	45.202	ENSMFAG00000032233	RIF1	66	46.343	Macaca_fascicularis
ENSPMGG00000016141	rif1	82	45.202	ENSMMUG00000008611	RIF1	66	46.343	Macaca_mulatta
ENSPMGG00000016141	rif1	82	45.123	ENSMNEG00000031616	RIF1	66	46.386	Macaca_nemestrina
ENSPMGG00000016141	rif1	82	45.210	ENSMLEG00000042945	RIF1	66	46.386	Mandrillus_leucophaeus
ENSPMGG00000016141	rif1	93	59.868	ENSMAMG00000001745	rif1	80	59.868	Mastacembelus_armatus
ENSPMGG00000016141	rif1	96	61.125	ENSMZEG00005020920	rif1	83	61.753	Maylandia_zebra
ENSPMGG00000016141	rif1	70	53.814	ENSMGAG00000012732	RIF1	64	54.237	Meleagris_gallopavo
ENSPMGG00000016141	rif1	71	63.559	ENSMAUG00000013158	Rif1	62	63.559	Mesocricetus_auratus
ENSPMGG00000016141	rif1	88	44.314	ENSMICG00000046127	RIF1	65	45.476	Microcebus_murinus
ENSPMGG00000016141	rif1	75	45.192	ENSMOCG00000009381	Rif1	66	43.644	Microtus_ochrogaster
ENSPMGG00000016141	rif1	92	61.949	ENSMMOG00000006519	rif1	78	59.002	Mola_mola
ENSPMGG00000016141	rif1	75	46.955	ENSMODG00000003703	RIF1	67	45.020	Monodelphis_domestica
ENSPMGG00000016141	rif1	90	61.841	ENSMALG00000016759	rif1	88	59.677	Monopterus_albus
ENSPMGG00000016141	rif1	75	44.984	MGP_CAROLIEiJ_G0023555	Rif1	66	45.595	Mus_caroli
ENSPMGG00000016141	rif1	76	44.532	ENSMUSG00000036202	Rif1	72	43.038	Mus_musculus
ENSPMGG00000016141	rif1	79	41.920	MGP_PahariEiJ_G0025006	Rif1	67	42.627	Mus_pahari
ENSPMGG00000016141	rif1	75	45.498	MGP_SPRETEiJ_G0024476	Rif1	64	45.527	Mus_spretus
ENSPMGG00000016141	rif1	81	45.000	ENSMPUG00000000371	RIF1	65	45.810	Mustela_putorius_furo
ENSPMGG00000016141	rif1	65	42.247	ENSMLUG00000003376	RIF1	62	42.247	Myotis_lucifugus
ENSPMGG00000016141	rif1	77	45.447	ENSNGAG00000009268	Rif1	66	45.756	Nannospalax_galili
ENSPMGG00000016141	rif1	96	60.452	ENSNBRG00000014257	rif1	81	62.855	Neolamprologus_brichardi
ENSPMGG00000016141	rif1	79	44.488	ENSNLEG00000010955	RIF1	65	45.669	Nomascus_leucogenys
ENSPMGG00000016141	rif1	61	61.883	ENSMEUG00000007601	-	53	61.883	Notamacropus_eugenii
ENSPMGG00000016141	rif1	74	45.223	ENSODEG00000003950	RIF1	63	45.223	Octodon_degus
ENSPMGG00000016141	rif1	96	61.755	ENSONIG00000013657	rif1	80	63.137	Oreochromis_niloticus
ENSPMGG00000016141	rif1	64	49.197	ENSOANG00000006078	-	55	49.386	Ornithorhynchus_anatinus
ENSPMGG00000016141	rif1	79	44.613	ENSOCUG00000017435	RIF1	65	46.553	Oryctolagus_cuniculus
ENSPMGG00000016141	rif1	87	61.518	ENSORLG00020001302	rif1	79	61.518	Oryzias_latipes_hni
ENSPMGG00000016141	rif1	99	58.587	ENSORLG00015000009	rif1	78	61.518	Oryzias_latipes_hsok
ENSPMGG00000016141	rif1	86	65.217	ENSOMEG00000021513	rif1	76	65.217	Oryzias_melastigma
ENSPMGG00000016141	rif1	80	45.622	ENSOGAG00000006141	RIF1	65	45.756	Otolemur_garnettii
ENSPMGG00000016141	rif1	79	45.997	ENSOARG00000008930	RIF1	65	46.817	Ovis_aries
ENSPMGG00000016141	rif1	79	44.980	ENSPPAG00000023754	RIF1	65	46.307	Pan_paniscus
ENSPMGG00000016141	rif1	79	45.103	ENSPPRG00000003618	RIF1	65	46.221	Panthera_pardus
ENSPMGG00000016141	rif1	79	45.103	ENSPTIG00000020652	RIF1	65	46.221	Panthera_tigris_altaica
ENSPMGG00000016141	rif1	79	45.059	ENSPTRG00000012534	RIF1	65	46.386	Pan_troglodytes
ENSPMGG00000016141	rif1	82	45.225	ENSPANG00000008525	RIF1	66	46.307	Papio_anubis
ENSPMGG00000016141	rif1	97	60.317	ENSPKIG00000004267	rif1	78	60.317	Paramormyrops_kingsleyae
ENSPMGG00000016141	rif1	76	45.344	ENSPEMG00000000446	Rif1	66	45.803	Peromyscus_maniculatus_bairdii
ENSPMGG00000016141	rif1	75	47.003	ENSPCIG00000009185	RIF1	64	47.452	Phascolarctos_cinereus
ENSPMGG00000016141	rif1	86	58.273	ENSPFOG00000000554	-	79	59.484	Poecilia_formosa
ENSPMGG00000016141	rif1	94	60.256	ENSPFOG00000017804	rif1	80	61.585	Poecilia_formosa
ENSPMGG00000016141	rif1	94	77.479	ENSPLAG00000017945	rif1	76	77.479	Poecilia_latipinna
ENSPMGG00000016141	rif1	81	56.990	ENSPMEG00000006897	-	78	58.320	Poecilia_mexicana
ENSPMGG00000016141	rif1	74	78.495	ENSPREG00000018052	rif1	79	61.659	Poecilia_reticulata
ENSPMGG00000016141	rif1	79	45.146	ENSPPYG00000012846	RIF1	65	46.704	Pongo_abelii
ENSPMGG00000016141	rif1	75	46.497	ENSPCOG00000027888	RIF1	62	46.497	Propithecus_coquereli
ENSPMGG00000016141	rif1	66	58.980	ENSPVAG00000014276	RIF1	57	58.678	Pteropus_vampyrus
ENSPMGG00000016141	rif1	94	60.093	ENSPNYG00000012940	rif1	81	61.861	Pundamilia_nyererei
ENSPMGG00000016141	rif1	94	52.826	ENSPNAG00000016685	rif1	76	62.424	Pygocentrus_nattereri
ENSPMGG00000016141	rif1	76	43.807	ENSRNOG00000054901	Rif1	64	44.411	Rattus_norvegicus
ENSPMGG00000016141	rif1	82	44.321	ENSRBIG00000003704	RIF1	65	46.296	Rhinopithecus_bieti
ENSPMGG00000016141	rif1	80	46.742	ENSRROG00000028206	RIF1	65	46.742	Rhinopithecus_roxellana
ENSPMGG00000016141	rif1	75	50.562	ENSSBOG00000029530	RIF1	64	51.087	Saimiri_boliviensis_boliviensis
ENSPMGG00000016141	rif1	75	45.912	ENSSHAG00000018552	RIF1	64	45.938	Sarcophilus_harrisii
ENSPMGG00000016141	rif1	93	54.122	ENSSFOG00015021539	rif1	87	54.108	Scleropages_formosus
ENSPMGG00000016141	rif1	90	66.282	ENSSMAG00000011704	rif1	73	66.282	Scophthalmus_maximus
ENSPMGG00000016141	rif1	92	65.479	ENSSDUG00000015632	rif1	79	65.842	Seriola_dumerili
ENSPMGG00000016141	rif1	95	61.735	ENSSLDG00000019531	rif1	77	64.529	Seriola_lalandi_dorsalis
ENSPMGG00000016141	rif1	77	49.088	ENSSPUG00000003062	RIF1	69	49.088	Sphenodon_punctatus
ENSPMGG00000016141	rif1	79	73.374	ENSSPAG00000018359	rif1	95	74.227	Stegastes_partitus
ENSPMGG00000016141	rif1	79	45.242	ENSSSCG00000016395	RIF1	66	46.462	Sus_scrofa
ENSPMGG00000016141	rif1	54	50.588	ENSTGUG00000016761	RIF1	100	50.869	Taeniopygia_guttata
ENSPMGG00000016141	rif1	94	62.245	ENSTRUG00000015808	rif1	86	59.161	Takifugu_rubripes
ENSPMGG00000016141	rif1	91	60.411	ENSTNIG00000011538	rif1	82	60.411	Tetraodon_nigroviridis
ENSPMGG00000016141	rif1	65	53.673	ENSTBEG00000016082	RIF1	54	53.673	Tupaia_belangeri
ENSPMGG00000016141	rif1	75	45.860	ENSTTRG00000011190	RIF1	63	46.478	Tursiops_truncatus
ENSPMGG00000016141	rif1	66	42.179	ENSUAMG00000026385	RIF1	61	42.634	Ursus_americanus
ENSPMGG00000016141	rif1	85	43.799	ENSUMAG00000000337	RIF1	69	44.444	Ursus_maritimus
ENSPMGG00000016141	rif1	77	44.847	ENSVPAG00000002162	RIF1	63	46.054	Vicugna_pacos
ENSPMGG00000016141	rif1	83	44.321	ENSVVUG00000011293	RIF1	66	45.447	Vulpes_vulpes
ENSPMGG00000016141	rif1	84	47.811	ENSXETG00000004530	rif1	74	48.148	Xenopus_tropicalis
ENSPMGG00000016141	rif1	94	56.382	ENSXMAG00000000506	rif1	79	57.682	Xiphophorus_maculatus