EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000016561 (Gene tree)
Gene ID: -
Gene Symbol: scrt2
Alias: -
Full Name: scratch family zinc finger 2
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 6992 bases
Position: chrKN466703.1:1176165-1183156
Accession: ZDB-GENE-030131-4097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000020483	zf-C2H2	PF00096.26	1.5e-26	1	5
ENSPMGP00000020483	zf-C2H2	PF00096.26	1.5e-26	2	5
ENSPMGP00000020483	zf-C2H2	PF00096.26	1.5e-26	3	5
ENSPMGP00000020483	zf-C2H2	PF00096.26	1.5e-26	4	5
ENSPMGP00000020483	zf-C2H2	PF00096.26	1.5e-26	5	5
ENSPMGP00000020483	zf-met	PF12874.7	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000021821	-	855	-	ENSPMGP00000020483	284 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000016561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000016561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000016561	scrt2	100	82.927	ENSAPOG00000003680	scrt2	100	82.927	Acanthochromis_polyacanthus
ENSPMGG00000016561	scrt2	96	70.397	ENSAPOG00000009279	scrt1b	96	70.397	Acanthochromis_polyacanthus
ENSPMGG00000016561	scrt2	96	67.143	ENSAPOG00000015197	-	97	67.143	Acanthochromis_polyacanthus
ENSPMGG00000016561	scrt2	96	65.753	ENSACIG00000006586	-	97	65.753	Amphilophus_citrinellus
ENSPMGG00000016561	scrt2	100	81.185	ENSACIG00000012604	scrt2	100	81.185	Amphilophus_citrinellus
ENSPMGG00000016561	scrt2	100	62.058	ENSACIG00000001296	-	100	61.415	Amphilophus_citrinellus
ENSPMGG00000016561	scrt2	96	68.231	ENSACIG00000013613	scrt1b	96	68.231	Amphilophus_citrinellus
ENSPMGG00000016561	scrt2	96	65.411	ENSAOCG00000023304	-	97	65.411	Amphiprion_ocellaris
ENSPMGG00000016561	scrt2	96	70.397	ENSAOCG00000003910	scrt1b	96	70.397	Amphiprion_ocellaris
ENSPMGG00000016561	scrt2	100	82.927	ENSAOCG00000021557	scrt2	100	82.927	Amphiprion_ocellaris
ENSPMGG00000016561	scrt2	100	82.927	ENSAPEG00000022558	scrt2	100	82.927	Amphiprion_percula
ENSPMGG00000016561	scrt2	96	65.411	ENSAPEG00000005677	-	97	65.411	Amphiprion_percula
ENSPMGG00000016561	scrt2	96	70.397	ENSAPEG00000000869	scrt1b	96	70.397	Amphiprion_percula
ENSPMGG00000016561	scrt2	100	77.812	ENSATEG00000023998	scrt2	100	77.812	Anabas_testudineus
ENSPMGG00000016561	scrt2	96	67.500	ENSATEG00000011660	-	97	67.500	Anabas_testudineus
ENSPMGG00000016561	scrt2	100	57.975	ENSATEG00000003195	-	100	57.975	Anabas_testudineus
ENSPMGG00000016561	scrt2	96	70.758	ENSATEG00000002302	scrt1b	96	70.758	Anabas_testudineus
ENSPMGG00000016561	scrt2	76	76.037	ENSACAG00000016109	SCRT2	94	76.037	Anolis_carolinensis
ENSPMGG00000016561	scrt2	96	70.036	ENSACLG00000007162	scrt1b	96	70.036	Astatotilapia_calliptera
ENSPMGG00000016561	scrt2	96	64.430	ENSACLG00000012046	-	97	64.430	Astatotilapia_calliptera
ENSPMGG00000016561	scrt2	96	72.101	ENSAMXG00000038085	scrt1a	97	72.464	Astyanax_mexicanus
ENSPMGG00000016561	scrt2	86	86.800	ENSAMXG00000034158	scrt2	90	86.800	Astyanax_mexicanus
ENSPMGG00000016561	scrt2	96	69.504	ENSAMXG00000042624	SCRT1	98	69.504	Astyanax_mexicanus
ENSPMGG00000016561	scrt2	57	61.963	WBGene00000468	ces-1	59	61.963	Caenorhabditis_elegans
ENSPMGG00000016561	scrt2	86	64.706	ENSCPBG00000027613	SCRT2	100	65.098	Chrysemys_picta_bellii
ENSPMGG00000016561	scrt2	97	71.841	ENSCPBG00000018899	SCRT1	97	71.841	Chrysemys_picta_bellii
ENSPMGG00000016561	scrt2	96	69.675	ENSCSEG00000008596	scrt1b	96	69.675	Cynoglossus_semilaevis
ENSPMGG00000016561	scrt2	100	78.981	ENSCSEG00000021542	scrt2	100	78.981	Cynoglossus_semilaevis
ENSPMGG00000016561	scrt2	96	64.286	ENSCSEG00000014892	-	97	64.286	Cynoglossus_semilaevis
ENSPMGG00000016561	scrt2	99	64.784	ENSCVAG00000003190	-	100	64.784	Cyprinodon_variegatus
ENSPMGG00000016561	scrt2	96	70.758	ENSCVAG00000009561	scrt1b	96	70.758	Cyprinodon_variegatus
ENSPMGG00000016561	scrt2	100	77.812	ENSCVAG00000021038	scrt2	100	77.812	Cyprinodon_variegatus
ENSPMGG00000016561	scrt2	96	72.101	ENSDARG00000100821	scrt1a	97	72.101	Danio_rerio
ENSPMGG00000016561	scrt2	96	73.188	ENSDARG00000040214	scrt1b	97	73.188	Danio_rerio
ENSPMGG00000016561	scrt2	96	72.662	ENSELUG00000022228	scrt1a	96	72.662	Esox_lucius
ENSPMGG00000016561	scrt2	100	76.380	ENSELUG00000023883	scrt2	100	76.380	Esox_lucius
ENSPMGG00000016561	scrt2	96	72.826	ENSELUG00000005435	scrt1b	96	72.826	Esox_lucius
ENSPMGG00000016561	scrt2	83	70.763	ENSFALG00000005718	SCRT2	96	72.152	Ficedula_albicollis
ENSPMGG00000016561	scrt2	97	59.353	ENSFDAG00000008733	SCRT1	98	59.353	Fukomys_damarensis
ENSPMGG00000016561	scrt2	96	70.036	ENSFHEG00000014820	scrt1b	96	70.036	Fundulus_heteroclitus
ENSPMGG00000016561	scrt2	100	85.017	ENSFHEG00000005732	scrt2	100	85.017	Fundulus_heteroclitus
ENSPMGG00000016561	scrt2	96	65.068	ENSFHEG00000009794	-	97	65.068	Fundulus_heteroclitus
ENSPMGG00000016561	scrt2	99	71.517	ENSGMOG00000019519	scrt2	99	71.517	Gadus_morhua
ENSPMGG00000016561	scrt2	96	69.708	ENSGMOG00000000629	scrt1b	96	69.708	Gadus_morhua
ENSPMGG00000016561	scrt2	96	65.343	ENSGALG00000028912	SCRT2	97	66.187	Gallus_gallus
ENSPMGG00000016561	scrt2	96	70.758	ENSGAFG00000007636	scrt1b	96	70.758	Gambusia_affinis
ENSPMGG00000016561	scrt2	99	64.211	ENSGAFG00000009650	-	100	64.211	Gambusia_affinis
ENSPMGG00000016561	scrt2	100	79.545	ENSGAFG00000003093	scrt2	100	79.545	Gambusia_affinis
ENSPMGG00000016561	scrt2	96	65.636	ENSGACG00000004072	-	97	65.636	Gasterosteus_aculeatus
ENSPMGG00000016561	scrt2	96	68.498	ENSGACG00000008982	scrt1b	96	68.498	Gasterosteus_aculeatus
ENSPMGG00000016561	scrt2	97	70.290	ENSGAGG00000011736	SCRT1	98	70.290	Gopherus_agassizii
ENSPMGG00000016561	scrt2	100	66.319	ENSGAGG00000020761	SCRT2	100	66.667	Gopherus_agassizii
ENSPMGG00000016561	scrt2	68	78.351	ENSGAGG00000020760	-	74	78.866	Gopherus_agassizii
ENSPMGG00000016561	scrt2	100	82.230	ENSHBUG00000012492	scrt2	100	82.230	Haplochromis_burtoni
ENSPMGG00000016561	scrt2	96	70.036	ENSHBUG00000016621	scrt1b	96	70.036	Haplochromis_burtoni
ENSPMGG00000016561	scrt2	96	65.068	ENSHBUG00000019101	-	97	65.068	Haplochromis_burtoni
ENSPMGG00000016561	scrt2	96	69.314	ENSHCOG00000016704	scrt1b	96	69.314	Hippocampus_comes
ENSPMGG00000016561	scrt2	96	63.103	ENSHCOG00000016179	-	97	63.103	Hippocampus_comes
ENSPMGG00000016561	scrt2	100	79.801	ENSHCOG00000008116	scrt2	100	79.801	Hippocampus_comes
ENSPMGG00000016561	scrt2	96	65.950	ENSIPUG00000005547	-	98	65.950	Ictalurus_punctatus
ENSPMGG00000016561	scrt2	96	71.480	ENSIPUG00000004551	scrt1a	97	71.480	Ictalurus_punctatus
ENSPMGG00000016561	scrt2	100	77.188	ENSKMAG00000018087	scrt2	100	77.188	Kryptolebias_marmoratus
ENSPMGG00000016561	scrt2	99	62.706	ENSKMAG00000009489	-	100	63.576	Kryptolebias_marmoratus
ENSPMGG00000016561	scrt2	96	70.758	ENSKMAG00000005484	scrt1b	96	70.758	Kryptolebias_marmoratus
ENSPMGG00000016561	scrt2	96	64.948	ENSLBEG00000023388	-	97	64.948	Labrus_bergylta
ENSPMGG00000016561	scrt2	100	78.193	ENSLBEG00000015419	scrt2	100	78.193	Labrus_bergylta
ENSPMGG00000016561	scrt2	96	72.924	ENSLACG00000003588	SCRT1	96	72.924	Latimeria_chalumnae
ENSPMGG00000016561	scrt2	96	74.460	ENSLOCG00000007573	scrt1b	97	74.460	Lepisosteus_oculatus
ENSPMGG00000016561	scrt2	100	59.006	ENSLOCG00000002246	scrt2	100	59.006	Lepisosteus_oculatus
ENSPMGG00000016561	scrt2	96	70.036	ENSMAMG00000011698	scrt1b	96	70.036	Mastacembelus_armatus
ENSPMGG00000016561	scrt2	100	78.438	ENSMAMG00000001291	scrt2	100	78.438	Mastacembelus_armatus
ENSPMGG00000016561	scrt2	96	70.036	ENSMZEG00005005627	scrt1b	96	70.036	Maylandia_zebra
ENSPMGG00000016561	scrt2	96	65.068	ENSMZEG00005026702	-	97	65.068	Maylandia_zebra
ENSPMGG00000016561	scrt2	100	82.230	ENSMZEG00005026445	scrt2	100	82.230	Maylandia_zebra
ENSPMGG00000016561	scrt2	83	71.064	ENSMGAG00000016579	SCRT2	96	72.034	Meleagris_gallopavo
ENSPMGG00000016561	scrt2	99	77.848	ENSMMOG00000009272	scrt2	99	77.778	Mola_mola
ENSPMGG00000016561	scrt2	96	69.314	ENSMMOG00000003327	scrt1b	96	69.314	Mola_mola
ENSPMGG00000016561	scrt2	96	64.527	ENSMMOG00000018345	-	97	64.527	Mola_mola
ENSPMGG00000016561	scrt2	100	83.045	ENSMALG00000013656	scrt2	100	83.045	Monopterus_albus
ENSPMGG00000016561	scrt2	96	70.397	ENSMALG00000012704	scrt1b	96	70.397	Monopterus_albus
ENSPMGG00000016561	scrt2	96	53.846	ENSNGAG00000020815	Scrt2	99	52.482	Nannospalax_galili
ENSPMGG00000016561	scrt2	96	69.395	ENSNBRG00000013983	scrt1b	96	69.395	Neolamprologus_brichardi
ENSPMGG00000016561	scrt2	100	82.230	ENSNBRG00000007221	scrt2	100	82.230	Neolamprologus_brichardi
ENSPMGG00000016561	scrt2	96	65.068	ENSNBRG00000014882	-	97	65.068	Neolamprologus_brichardi
ENSPMGG00000016561	scrt2	99	65.854	ENSONIG00000003152	-	100	65.854	Oreochromis_niloticus
ENSPMGG00000016561	scrt2	100	77.812	ENSONIG00000016758	scrt2	100	77.812	Oreochromis_niloticus
ENSPMGG00000016561	scrt2	96	61.438	ENSONIG00000019809	-	100	61.438	Oreochromis_niloticus
ENSPMGG00000016561	scrt2	96	69.675	ENSONIG00000006007	scrt1b	100	66.323	Oreochromis_niloticus
ENSPMGG00000016561	scrt2	100	77.812	ENSORLG00000024051	scrt2	100	77.812	Oryzias_latipes
ENSPMGG00000016561	scrt2	96	70.968	ENSORLG00000025651	scrt1b	96	70.968	Oryzias_latipes
ENSPMGG00000016561	scrt2	99	62.706	ENSORLG00000022825	-	100	62.706	Oryzias_latipes
ENSPMGG00000016561	scrt2	96	70.968	ENSORLG00020012967	scrt1b	96	70.968	Oryzias_latipes_hni
ENSPMGG00000016561	scrt2	100	77.812	ENSORLG00020011478	scrt2	100	77.812	Oryzias_latipes_hni
ENSPMGG00000016561	scrt2	100	77.812	ENSORLG00015005524	scrt2	100	77.812	Oryzias_latipes_hsok
ENSPMGG00000016561	scrt2	96	70.968	ENSORLG00015019165	scrt1b	96	70.968	Oryzias_latipes_hsok
ENSPMGG00000016561	scrt2	99	62.295	ENSORLG00015010104	-	100	62.295	Oryzias_latipes_hsok
ENSPMGG00000016561	scrt2	100	77.812	ENSOMEG00000002661	scrt2	100	77.812	Oryzias_melastigma
ENSPMGG00000016561	scrt2	99	63.366	ENSOMEG00000000286	-	100	63.366	Oryzias_melastigma
ENSPMGG00000016561	scrt2	96	70.968	ENSOMEG00000003925	scrt1b	96	70.968	Oryzias_melastigma
ENSPMGG00000016561	scrt2	96	73.551	ENSPKIG00000020085	scrt1a	97	73.551	Paramormyrops_kingsleyae
ENSPMGG00000016561	scrt2	96	74.101	ENSPKIG00000022303	SCRT1	97	74.101	Paramormyrops_kingsleyae
ENSPMGG00000016561	scrt2	96	63.823	ENSPMGG00000021402	-	97	63.823	Periophthalmus_magnuspinnatus
ENSPMGG00000016561	scrt2	96	70.803	ENSPMGG00000002260	scrt1b	96	70.803	Periophthalmus_magnuspinnatus
ENSPMGG00000016561	scrt2	96	70.758	ENSPFOG00000017719	scrt1b	96	70.758	Poecilia_formosa
ENSPMGG00000016561	scrt2	100	78.125	ENSPFOG00000007738	scrt2	100	78.125	Poecilia_formosa
ENSPMGG00000016561	scrt2	99	63.758	ENSPFOG00000005616	-	100	63.758	Poecilia_formosa
ENSPMGG00000016561	scrt2	96	70.758	ENSPLAG00000009876	scrt1b	96	70.758	Poecilia_latipinna
ENSPMGG00000016561	scrt2	99	63.758	ENSPLAG00000011718	-	100	63.758	Poecilia_latipinna
ENSPMGG00000016561	scrt2	100	85.366	ENSPLAG00000005765	scrt2	100	85.366	Poecilia_latipinna
ENSPMGG00000016561	scrt2	96	70.758	ENSPMEG00000013274	scrt1b	96	70.758	Poecilia_mexicana
ENSPMGG00000016561	scrt2	99	63.758	ENSPMEG00000011706	-	100	63.758	Poecilia_mexicana
ENSPMGG00000016561	scrt2	100	85.366	ENSPMEG00000001538	scrt2	100	85.366	Poecilia_mexicana
ENSPMGG00000016561	scrt2	96	70.758	ENSPREG00000018985	scrt1b	96	70.758	Poecilia_reticulata
ENSPMGG00000016561	scrt2	100	78.125	ENSPREG00000001147	scrt2	100	78.125	Poecilia_reticulata
ENSPMGG00000016561	scrt2	99	63.758	ENSPREG00000012166	-	100	63.758	Poecilia_reticulata
ENSPMGG00000016561	scrt2	96	70.036	ENSPNYG00000017733	scrt1b	96	70.036	Pundamilia_nyererei
ENSPMGG00000016561	scrt2	100	82.230	ENSPNYG00000013109	scrt2	100	82.230	Pundamilia_nyererei
ENSPMGG00000016561	scrt2	96	65.068	ENSPNYG00000008865	-	97	65.068	Pundamilia_nyererei
ENSPMGG00000016561	scrt2	96	73.551	ENSPNAG00000017415	scrt1a	97	73.551	Pygocentrus_nattereri
ENSPMGG00000016561	scrt2	96	70.036	ENSPNAG00000027880	-	98	70.036	Pygocentrus_nattereri
ENSPMGG00000016561	scrt2	96	72.464	ENSSFOG00015001195	SCRT1	97	72.464	Scleropages_formosus
ENSPMGG00000016561	scrt2	96	69.675	ENSSMAG00000019207	scrt1b	96	69.675	Scophthalmus_maximus
ENSPMGG00000016561	scrt2	96	63.851	ENSSMAG00000005122	-	97	63.851	Scophthalmus_maximus
ENSPMGG00000016561	scrt2	96	64.626	ENSSDUG00000013215	-	97	64.626	Seriola_dumerili
ENSPMGG00000016561	scrt2	96	78.840	ENSSDUG00000001637	scrt2	95	78.840	Seriola_dumerili
ENSPMGG00000016561	scrt2	96	70.397	ENSSDUG00000007752	scrt1b	96	70.397	Seriola_dumerili
ENSPMGG00000016561	scrt2	96	70.397	ENSSLDG00000017166	scrt1b	96	70.397	Seriola_lalandi_dorsalis
ENSPMGG00000016561	scrt2	96	64.626	ENSSLDG00000016454	-	97	64.626	Seriola_lalandi_dorsalis
ENSPMGG00000016561	scrt2	100	78.438	ENSSLDG00000013565	scrt2	100	78.438	Seriola_lalandi_dorsalis
ENSPMGG00000016561	scrt2	96	68.841	ENSSPUG00000018637	SCRT2	97	69.203	Sphenodon_punctatus
ENSPMGG00000016561	scrt2	96	70.397	ENSSPAG00000002200	scrt1b	96	70.397	Stegastes_partitus
ENSPMGG00000016561	scrt2	96	65.085	ENSSPAG00000006788	-	97	65.986	Stegastes_partitus
ENSPMGG00000016561	scrt2	100	83.275	ENSSPAG00000014018	scrt2	100	83.275	Stegastes_partitus
ENSPMGG00000016561	scrt2	83	70.638	ENSTGUG00000006801	SCRT2	99	72.034	Taeniopygia_guttata
ENSPMGG00000016561	scrt2	99	80.399	ENSTRUG00000007620	scrt2	99	80.399	Takifugu_rubripes
ENSPMGG00000016561	scrt2	96	69.343	ENSTRUG00000011637	scrt1b	97	69.343	Takifugu_rubripes
ENSPMGG00000016561	scrt2	83	70.339	ENSTRUG00000019558	-	78	70.339	Takifugu_rubripes
ENSPMGG00000016561	scrt2	96	65.753	ENSTRUG00000012719	-	97	65.753	Takifugu_rubripes
ENSPMGG00000016561	scrt2	99	85.121	ENSTNIG00000012473	scrt2	100	85.121	Tetraodon_nigroviridis
ENSPMGG00000016561	scrt2	96	69.343	ENSTNIG00000018384	scrt1b	96	69.343	Tetraodon_nigroviridis
ENSPMGG00000016561	scrt2	100	79.870	ENSXCOG00000014367	scrt2	100	79.870	Xiphophorus_couchianus
ENSPMGG00000016561	scrt2	96	70.758	ENSXCOG00000019675	scrt1b	96	70.758	Xiphophorus_couchianus
ENSPMGG00000016561	scrt2	99	63.860	ENSXCOG00000019861	-	100	63.860	Xiphophorus_couchianus
ENSPMGG00000016561	scrt2	100	78.125	ENSXMAG00000028567	scrt2	100	78.125	Xiphophorus_maculatus
ENSPMGG00000016561	scrt2	99	63.423	ENSXMAG00000015353	-	100	63.423	Xiphophorus_maculatus
ENSPMGG00000016561	scrt2	96	70.758	ENSXMAG00000027885	scrt1b	96	70.758	Xiphophorus_maculatus