EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000016596 (Gene tree)
Gene ID: -
Gene Symbol: apex1
Alias: -
Full Name: APEX nuclease (multifunctional DNA repair enzyme) 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 3753 bases
Position: chrKN465672.1:47-3799
Accession: ZDB-GENE-040426-2761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000020518	Exo_endo_phos	PF03372.23	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000021863	-	1002	-	ENSPMGP00000020518	333 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000016596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000016596's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000016596	apex1	73	66.667	ENSG00000100823	APEX1	76	66.667	Homo_sapiens
ENSPMGG00000016596	apex1	80	75.824	ENSAPOG00000017002	apex1	89	75.824	Acanthochromis_polyacanthus
ENSPMGG00000016596	apex1	73	66.667	ENSAMEG00000005418	APEX1	76	66.667	Ailuropoda_melanoleuca
ENSPMGG00000016596	apex1	80	76.923	ENSACIG00000010653	apex1	92	76.923	Amphilophus_citrinellus
ENSPMGG00000016596	apex1	74	81.377	ENSAOCG00000009649	apex1	79	81.377	Amphiprion_ocellaris
ENSPMGG00000016596	apex1	80	75.824	ENSAPEG00000021453	apex1	88	75.824	Amphiprion_percula
ENSPMGG00000016596	apex1	80	76.103	ENSATEG00000002883	apex1	85	76.103	Anabas_testudineus
ENSPMGG00000016596	apex1	71	74.043	ENSACAG00000008099	APEX1	74	74.043	Anolis_carolinensis
ENSPMGG00000016596	apex1	73	67.078	ENSANAG00000030117	APEX1	76	67.078	Aotus_nancymaae
ENSPMGG00000016596	apex1	80	77.656	ENSACLG00000018441	apex1	88	77.656	Astatotilapia_calliptera
ENSPMGG00000016596	apex1	79	76.580	ENSAMXG00000034699	apex1	86	76.580	Astyanax_mexicanus
ENSPMGG00000016596	apex1	73	66.255	ENSBTAG00000002745	APEX1	76	66.255	Bos_taurus
ENSPMGG00000016596	apex1	70	44.444	WBGene00001372	exo-3	80	44.444	Caenorhabditis_elegans
ENSPMGG00000016596	apex1	73	67.078	ENSCJAG00000009726	APEX1	76	67.078	Callithrix_jacchus
ENSPMGG00000016596	apex1	73	67.078	ENSCAFG00000032033	APEX1	76	67.078	Canis_familiaris
ENSPMGG00000016596	apex1	73	67.078	ENSCAFG00020014377	-	76	67.078	Canis_lupus_dingo
ENSPMGG00000016596	apex1	73	66.255	ENSCHIG00000007298	-	76	66.255	Capra_hircus
ENSPMGG00000016596	apex1	71	53.814	ENSCHIG00000014537	-	74	53.814	Capra_hircus
ENSPMGG00000016596	apex1	73	65.432	ENSTSYG00000034813	APEX1	76	65.432	Carlito_syrichta
ENSPMGG00000016596	apex1	71	68.220	ENSCAPG00000016235	APEX1	91	68.220	Cavia_aperea
ENSPMGG00000016596	apex1	73	67.490	ENSCPOG00000030909	APEX1	76	67.490	Cavia_porcellus
ENSPMGG00000016596	apex1	73	67.078	ENSCCAG00000033056	-	76	67.078	Cebus_capucinus
ENSPMGG00000016596	apex1	72	56.846	ENSCCAG00000031931	-	77	56.846	Cebus_capucinus
ENSPMGG00000016596	apex1	73	66.255	ENSCATG00000015580	APEX1	76	66.255	Cercocebus_atys
ENSPMGG00000016596	apex1	73	66.255	ENSCLAG00000001002	APEX1	76	66.255	Chinchilla_lanigera
ENSPMGG00000016596	apex1	73	66.667	ENSCSAG00000016670	-	76	66.667	Chlorocebus_sabaeus
ENSPMGG00000016596	apex1	73	66.667	ENSCSAG00000016685	-	76	66.667	Chlorocebus_sabaeus
ENSPMGG00000016596	apex1	77	69.231	ENSCPBG00000009567	APEX1	81	69.231	Chrysemys_picta_bellii
ENSPMGG00000016596	apex1	82	52.747	ENSCING00000008137	-	85	52.747	Ciona_intestinalis
ENSPMGG00000016596	apex1	71	52.321	ENSCSAVG00000007144	-	92	52.321	Ciona_savignyi
ENSPMGG00000016596	apex1	73	66.667	ENSCANG00000030726	APEX1	76	66.667	Colobus_angolensis_palliatus
ENSPMGG00000016596	apex1	97	54.381	ENSCGRG00001017046	Apex1	100	54.381	Cricetulus_griseus_chok1gshd
ENSPMGG00000016596	apex1	97	54.381	ENSCGRG00000008984	Apex1	100	54.381	Cricetulus_griseus_crigri
ENSPMGG00000016596	apex1	79	75.836	ENSCSEG00000017499	apex1	86	75.836	Cynoglossus_semilaevis
ENSPMGG00000016596	apex1	80	75.824	ENSCVAG00000022075	apex1	88	75.824	Cyprinodon_variegatus
ENSPMGG00000016596	apex1	78	76.404	ENSDARG00000045843	apex1	86	76.404	Danio_rerio
ENSPMGG00000016596	apex1	73	63.786	ENSDNOG00000042234	APEX1	71	63.786	Dasypus_novemcinctus
ENSPMGG00000016596	apex1	73	66.667	ENSDORG00000001616	Apex1	76	66.667	Dipodomys_ordii
ENSPMGG00000016596	apex1	73	67.078	ENSETEG00000004855	-	76	67.078	Echinops_telfairi
ENSPMGG00000016596	apex1	71	60.593	ENSEBUG00000000622	-	91	60.593	Eptatretus_burgeri
ENSPMGG00000016596	apex1	72	67.220	ENSEASG00005017489	APEX1	56	67.220	Equus_asinus_asinus
ENSPMGG00000016596	apex1	72	67.220	ENSECAG00000022325	APEX1	62	67.220	Equus_caballus
ENSPMGG00000016596	apex1	70	65.665	ENSEEUG00000012569	APEX1	81	65.665	Erinaceus_europaeus
ENSPMGG00000016596	apex1	79	75.093	ENSELUG00000021706	apex1	86	75.093	Esox_lucius
ENSPMGG00000016596	apex1	73	66.667	ENSFCAG00000030869	APEX1	76	66.667	Felis_catus
ENSPMGG00000016596	apex1	75	65.759	ENSFDAG00000006120	APEX1	81	65.759	Fukomys_damarensis
ENSPMGG00000016596	apex1	79	76.580	ENSFHEG00000009031	apex1	72	76.580	Fundulus_heteroclitus
ENSPMGG00000016596	apex1	74	73.279	ENSGMOG00000007943	apex1	78	73.279	Gadus_morhua
ENSPMGG00000016596	apex1	79	77.323	ENSGAFG00000005311	apex1	86	77.323	Gambusia_affinis
ENSPMGG00000016596	apex1	78	77.186	ENSGACG00000019497	apex1	97	77.186	Gasterosteus_aculeatus
ENSPMGG00000016596	apex1	80	66.912	ENSGAGG00000014999	APEX1	85	66.912	Gopherus_agassizii
ENSPMGG00000016596	apex1	73	66.255	ENSGGOG00000002128	APEX1	76	66.255	Gorilla_gorilla
ENSPMGG00000016596	apex1	80	77.656	ENSHBUG00000005894	apex1	88	77.656	Haplochromis_burtoni
ENSPMGG00000016596	apex1	73	67.078	ENSHGLG00000002848	APEX1	76	67.078	Heterocephalus_glaber_female
ENSPMGG00000016596	apex1	73	67.078	ENSHGLG00100017878	APEX1	76	67.078	Heterocephalus_glaber_male
ENSPMGG00000016596	apex1	74	80.972	ENSHCOG00000009961	apex1	78	80.972	Hippocampus_comes
ENSPMGG00000016596	apex1	74	82.186	ENSIPUG00000005799	apex1	78	82.186	Ictalurus_punctatus
ENSPMGG00000016596	apex1	73	67.490	ENSSTOG00000010096	APEX1	76	67.490	Ictidomys_tridecemlineatus
ENSPMGG00000016596	apex1	73	58.025	ENSJJAG00000020465	-	77	58.025	Jaculus_jaculus
ENSPMGG00000016596	apex1	73	65.432	ENSJJAG00000012067	-	76	65.432	Jaculus_jaculus
ENSPMGG00000016596	apex1	80	54.579	ENSJJAG00000003660	-	86	54.579	Jaculus_jaculus
ENSPMGG00000016596	apex1	80	75.824	ENSKMAG00000021171	apex1	88	75.824	Kryptolebias_marmoratus
ENSPMGG00000016596	apex1	79	76.208	ENSLBEG00000010248	apex1	86	76.208	Labrus_bergylta
ENSPMGG00000016596	apex1	79	71.004	ENSLACG00000008617	APEX1	85	71.004	Latimeria_chalumnae
ENSPMGG00000016596	apex1	80	72.161	ENSLOCG00000015516	apex1	86	72.161	Lepisosteus_oculatus
ENSPMGG00000016596	apex1	73	67.078	ENSLAFG00000021872	APEX1	76	67.078	Loxodonta_africana
ENSPMGG00000016596	apex1	73	66.255	ENSMFAG00000002565	APEX1	76	66.255	Macaca_fascicularis
ENSPMGG00000016596	apex1	73	66.255	ENSMMUG00000048039	APEX1	76	66.255	Macaca_mulatta
ENSPMGG00000016596	apex1	73	66.255	ENSMNEG00000036944	APEX1	76	66.255	Macaca_nemestrina
ENSPMGG00000016596	apex1	73	66.255	ENSMLEG00000042125	APEX1	76	66.255	Mandrillus_leucophaeus
ENSPMGG00000016596	apex1	79	76.580	ENSMAMG00000023526	apex1	86	76.580	Mastacembelus_armatus
ENSPMGG00000016596	apex1	80	77.656	ENSMZEG00005014187	apex1	88	77.656	Maylandia_zebra
ENSPMGG00000016596	apex1	97	54.985	ENSMAUG00000013994	Apex1	100	54.985	Mesocricetus_auratus
ENSPMGG00000016596	apex1	73	66.255	ENSMICG00000043554	APEX1	76	66.255	Microcebus_murinus
ENSPMGG00000016596	apex1	73	67.078	ENSMOCG00000013721	Apex1	76	67.078	Microtus_ochrogaster
ENSPMGG00000016596	apex1	80	73.993	ENSMMOG00000010031	apex1	86	73.993	Mola_mola
ENSPMGG00000016596	apex1	73	66.255	ENSMODG00000007125	APEX1	76	66.255	Monodelphis_domestica
ENSPMGG00000016596	apex1	80	69.231	ENSMALG00000011699	apex1	73	69.231	Monopterus_albus
ENSPMGG00000016596	apex1	72	66.529	MGP_CAROLIEiJ_G0019209	Apex1	76	66.529	Mus_caroli
ENSPMGG00000016596	apex1	73	67.078	ENSMUSG00000035960	Apex1	76	67.078	Mus_musculus
ENSPMGG00000016596	apex1	73	67.078	MGP_PahariEiJ_G0030232	Apex1	100	54.079	Mus_pahari
ENSPMGG00000016596	apex1	73	67.078	MGP_SPRETEiJ_G0020101	Apex1	76	67.078	Mus_spretus
ENSPMGG00000016596	apex1	73	66.255	ENSMLUG00000028957	APEX1	76	66.255	Myotis_lucifugus
ENSPMGG00000016596	apex1	61	50.000	ENSNGAG00000021748	-	59	50.000	Nannospalax_galili
ENSPMGG00000016596	apex1	73	66.255	ENSNGAG00000002725	-	76	66.255	Nannospalax_galili
ENSPMGG00000016596	apex1	80	77.656	ENSNBRG00000005334	apex1	80	77.656	Neolamprologus_brichardi
ENSPMGG00000016596	apex1	73	66.255	ENSNLEG00000010839	APEX1	77	66.255	Nomascus_leucogenys
ENSPMGG00000016596	apex1	73	66.255	ENSMEUG00000014519	APEX1	77	66.255	Notamacropus_eugenii
ENSPMGG00000016596	apex1	73	65.844	ENSOPRG00000014029	APEX1	76	65.844	Ochotona_princeps
ENSPMGG00000016596	apex1	72	53.527	ENSODEG00000006583	-	75	53.527	Octodon_degus
ENSPMGG00000016596	apex1	69	54.741	ENSODEG00000004777	-	78	54.741	Octodon_degus
ENSPMGG00000016596	apex1	73	66.667	ENSODEG00000001703	-	76	66.667	Octodon_degus
ENSPMGG00000016596	apex1	80	78.022	ENSONIG00000012089	apex1	88	78.022	Oreochromis_niloticus
ENSPMGG00000016596	apex1	72	66.390	ENSOANG00000008836	APEX1	61	65.323	Ornithorhynchus_anatinus
ENSPMGG00000016596	apex1	73	66.667	ENSOCUG00000005022	APEX1	76	66.667	Oryctolagus_cuniculus
ENSPMGG00000016596	apex1	79	77.323	ENSORLG00000012378	apex1	77	84.100	Oryzias_latipes
ENSPMGG00000016596	apex1	79	77.323	ENSORLG00020021371	apex1	77	84.100	Oryzias_latipes_hni
ENSPMGG00000016596	apex1	79	77.323	ENSORLG00015020089	apex1	77	84.100	Oryzias_latipes_hsok
ENSPMGG00000016596	apex1	72	84.937	ENSOMEG00000018876	apex1	77	84.937	Oryzias_melastigma
ENSPMGG00000016596	apex1	72	58.776	ENSOGAG00000029355	-	78	58.776	Otolemur_garnettii
ENSPMGG00000016596	apex1	73	67.078	ENSOGAG00000013335	-	76	67.078	Otolemur_garnettii
ENSPMGG00000016596	apex1	73	66.667	ENSOARG00000019740	-	76	66.667	Ovis_aries
ENSPMGG00000016596	apex1	71	55.932	ENSOARG00000014424	-	75	55.932	Ovis_aries
ENSPMGG00000016596	apex1	70	63.948	ENSOARG00000001876	-	75	63.948	Ovis_aries
ENSPMGG00000016596	apex1	73	66.667	ENSPPAG00000038760	APEX1	77	66.667	Pan_paniscus
ENSPMGG00000016596	apex1	73	66.667	ENSPPRG00000011794	APEX1	76	66.667	Panthera_pardus
ENSPMGG00000016596	apex1	73	66.667	ENSPTIG00000014829	APEX1	76	66.667	Panthera_tigris_altaica
ENSPMGG00000016596	apex1	73	66.667	ENSPTRG00000006093	APEX1	77	66.667	Pan_troglodytes
ENSPMGG00000016596	apex1	73	66.255	ENSPANG00000022757	APEX1	76	66.255	Papio_anubis
ENSPMGG00000016596	apex1	79	74.349	ENSPKIG00000003504	apex1	85	74.349	Paramormyrops_kingsleyae
ENSPMGG00000016596	apex1	97	54.381	ENSPEMG00000019097	Apex1	100	54.381	Peromyscus_maniculatus_bairdii
ENSPMGG00000016596	apex1	71	72.034	ENSPMAG00000007275	-	80	72.034	Petromyzon_marinus
ENSPMGG00000016596	apex1	80	61.172	ENSPCIG00000023274	APEX1	85	61.172	Phascolarctos_cinereus
ENSPMGG00000016596	apex1	79	76.952	ENSPFOG00000004178	apex1	86	76.952	Poecilia_formosa
ENSPMGG00000016596	apex1	78	77.903	ENSPLAG00000012779	apex1	86	77.903	Poecilia_latipinna
ENSPMGG00000016596	apex1	79	76.952	ENSPMEG00000019623	apex1	86	76.952	Poecilia_mexicana
ENSPMGG00000016596	apex1	79	76.208	ENSPREG00000014298	apex1	86	76.208	Poecilia_reticulata
ENSPMGG00000016596	apex1	73	66.255	ENSPPYG00000005565	APEX1	76	66.255	Pongo_abelii
ENSPMGG00000016596	apex1	73	65.021	ENSPCAG00000010376	APEX1	76	65.021	Procavia_capensis
ENSPMGG00000016596	apex1	73	66.667	ENSPCOG00000021564	APEX1	76	66.667	Propithecus_coquereli
ENSPMGG00000016596	apex1	73	66.255	ENSPVAG00000010736	APEX1	76	66.255	Pteropus_vampyrus
ENSPMGG00000016596	apex1	80	78.022	ENSPNYG00000023940	apex1	88	78.022	Pundamilia_nyererei
ENSPMGG00000016596	apex1	75	73.930	ENSPNAG00000020897	apex1	82	76.230	Pygocentrus_nattereri
ENSPMGG00000016596	apex1	97	54.683	ENSRNOG00000009663	Apex1	100	54.683	Rattus_norvegicus
ENSPMGG00000016596	apex1	73	66.667	ENSRBIG00000038325	APEX1	75	66.667	Rhinopithecus_bieti
ENSPMGG00000016596	apex1	73	57.613	ENSSBOG00000031372	-	78	57.613	Saimiri_boliviensis_boliviensis
ENSPMGG00000016596	apex1	73	67.078	ENSSBOG00000018921	-	76	67.078	Saimiri_boliviensis_boliviensis
ENSPMGG00000016596	apex1	73	65.714	ENSSHAG00000013524	APEX1	96	53.963	Sarcophilus_harrisii
ENSPMGG00000016596	apex1	74	79.352	ENSSFOG00015001948	apex1	78	79.352	Scleropages_formosus
ENSPMGG00000016596	apex1	79	76.208	ENSSMAG00000013348	apex1	85	76.208	Scophthalmus_maximus
ENSPMGG00000016596	apex1	79	76.952	ENSSDUG00000016377	apex1	86	76.952	Seriola_dumerili
ENSPMGG00000016596	apex1	79	77.323	ENSSLDG00000023005	apex1	86	77.323	Seriola_lalandi_dorsalis
ENSPMGG00000016596	apex1	74	68.293	ENSSPUG00000000531	APEX1	81	68.293	Sphenodon_punctatus
ENSPMGG00000016596	apex1	79	77.323	ENSSPAG00000000458	apex1	88	77.323	Stegastes_partitus
ENSPMGG00000016596	apex1	73	67.078	ENSSSCG00000040060	-	76	67.078	Sus_scrofa
ENSPMGG00000016596	apex1	73	40.964	ENSSSCG00000039705	-	81	40.964	Sus_scrofa
ENSPMGG00000016596	apex1	71	56.170	ENSTGUG00000014378	APEX1	100	56.170	Taeniopygia_guttata
ENSPMGG00000016596	apex1	79	73.978	ENSTRUG00000004268	apex1	81	73.978	Takifugu_rubripes
ENSPMGG00000016596	apex1	79	75.093	ENSTNIG00000005778	apex1	87	75.093	Tetraodon_nigroviridis
ENSPMGG00000016596	apex1	73	62.963	ENSTBEG00000006405	APEX1	76	62.963	Tupaia_belangeri
ENSPMGG00000016596	apex1	71	66.383	ENSTTRG00000007860	APEX1	100	66.383	Tursiops_truncatus
ENSPMGG00000016596	apex1	73	66.667	ENSUAMG00000010457	APEX1	76	66.667	Ursus_americanus
ENSPMGG00000016596	apex1	73	66.667	ENSUMAG00000009178	APEX1	76	66.667	Ursus_maritimus
ENSPMGG00000016596	apex1	71	63.404	ENSVPAG00000005083	APEX1	100	63.404	Vicugna_pacos
ENSPMGG00000016596	apex1	73	67.078	ENSVVUG00000009010	APEX1	76	67.078	Vulpes_vulpes
ENSPMGG00000016596	apex1	82	66.787	ENSXETG00000024773	apex1	100	60.182	Xenopus_tropicalis
ENSPMGG00000016596	apex1	79	77.323	ENSXCOG00000015233	apex1	86	77.323	Xiphophorus_couchianus
ENSPMGG00000016596	apex1	79	77.323	ENSXMAG00000006195	apex1	86	77.323	Xiphophorus_maculatus