EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000016672 (Gene tree)
Gene ID: -
Gene Symbol: rtcb
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 3953 bases
Position: chrKN464377.1:827202-831154
Accession: ZDB-GENE-040426-2096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000020595	RtcB	PF01139.17	3.3e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000021947	-	1518	-	ENSPMGP00000020595	505 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000016672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000016672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000016672	rtcb	100	94.653	ENSG00000100220	RTCB	100	94.653	Homo_sapiens
ENSPMGG00000016672	rtcb	100	97.030	ENSAPOG00000006040	rtcb	100	97.030	Acanthochromis_polyacanthus
ENSPMGG00000016672	rtcb	100	94.851	ENSAMEG00000016152	RTCB	100	94.851	Ailuropoda_melanoleuca
ENSPMGG00000016672	rtcb	100	92.079	ENSACIG00000009083	rtcb	100	92.079	Amphilophus_citrinellus
ENSPMGG00000016672	rtcb	100	97.228	ENSAOCG00000005662	rtcb	100	97.391	Amphiprion_ocellaris
ENSPMGG00000016672	rtcb	100	97.228	ENSAPEG00000024701	rtcb	100	97.228	Amphiprion_percula
ENSPMGG00000016672	rtcb	96	91.992	ENSAPEG00000024653	rtcb	100	91.992	Amphiprion_percula
ENSPMGG00000016672	rtcb	100	96.832	ENSATEG00000000618	rtcb	100	96.832	Anabas_testudineus
ENSPMGG00000016672	rtcb	100	91.329	ENSACAG00000014817	RTCB	100	91.329	Anolis_carolinensis
ENSPMGG00000016672	rtcb	100	79.010	ENSANAG00000018191	-	91	79.010	Aotus_nancymaae
ENSPMGG00000016672	rtcb	72	97.222	ENSANAG00000023724	-	84	97.222	Aotus_nancymaae
ENSPMGG00000016672	rtcb	100	95.248	ENSACLG00000008367	rtcb	100	95.870	Astatotilapia_calliptera
ENSPMGG00000016672	rtcb	100	95.842	ENSAMXG00000042320	rtcb	100	95.842	Astyanax_mexicanus
ENSPMGG00000016672	rtcb	100	95.050	ENSBTAG00000011070	RTCB	100	95.050	Bos_taurus
ENSPMGG00000016672	rtcb	100	73.663	WBGene00008877	rtcb-1	100	73.663	Caenorhabditis_elegans
ENSPMGG00000016672	rtcb	100	94.455	ENSCJAG00000006128	RTCB	100	94.455	Callithrix_jacchus
ENSPMGG00000016672	rtcb	100	90.891	ENSCAFG00000010789	-	100	90.891	Canis_familiaris
ENSPMGG00000016672	rtcb	100	94.851	ENSCAFG00000001785	RTCB	100	94.851	Canis_familiaris
ENSPMGG00000016672	rtcb	100	94.851	ENSCAFG00020004890	-	100	94.851	Canis_lupus_dingo
ENSPMGG00000016672	rtcb	87	90.909	ENSCAFG00020018953	-	99	90.909	Canis_lupus_dingo
ENSPMGG00000016672	rtcb	100	94.851	ENSCHIG00000027009	-	100	94.851	Capra_hircus
ENSPMGG00000016672	rtcb	100	94.455	ENSTSYG00000012320	RTCB	100	94.455	Carlito_syrichta
ENSPMGG00000016672	rtcb	94	94.340	ENSCAPG00000011647	RTCB	96	94.340	Cavia_aperea
ENSPMGG00000016672	rtcb	100	94.455	ENSCCAG00000000618	RTCB	100	94.455	Cebus_capucinus
ENSPMGG00000016672	rtcb	100	94.653	ENSCATG00000033424	RTCB	100	94.653	Cercocebus_atys
ENSPMGG00000016672	rtcb	100	94.653	ENSCLAG00000007997	RTCB	100	94.653	Chinchilla_lanigera
ENSPMGG00000016672	rtcb	100	94.455	ENSCSAG00000008351	RTCB	100	94.455	Chlorocebus_sabaeus
ENSPMGG00000016672	rtcb	100	80.990	ENSCHOG00000009123	RTCB	100	80.990	Choloepus_hoffmanni
ENSPMGG00000016672	rtcb	100	93.267	ENSCPBG00000023184	RTCB	100	93.267	Chrysemys_picta_bellii
ENSPMGG00000016672	rtcb	100	81.980	ENSCING00000003830	-	100	81.980	Ciona_intestinalis
ENSPMGG00000016672	rtcb	100	82.178	ENSCSAVG00000008124	-	100	81.777	Ciona_savignyi
ENSPMGG00000016672	rtcb	100	90.891	ENSCANG00000001891	RTCB	100	90.891	Colobus_angolensis_palliatus
ENSPMGG00000016672	rtcb	100	94.653	ENSCGRG00001011173	Rtcb	100	94.653	Cricetulus_griseus_chok1gshd
ENSPMGG00000016672	rtcb	93	95.319	ENSCGRG00000009587	-	96	95.319	Cricetulus_griseus_crigri
ENSPMGG00000016672	rtcb	100	96.634	ENSCSEG00000003986	rtcb	100	96.634	Cynoglossus_semilaevis
ENSPMGG00000016672	rtcb	82	95.673	ENSCVAG00000000569	rtcb	95	95.673	Cyprinodon_variegatus
ENSPMGG00000016672	rtcb	100	95.842	ENSDARG00000101047	rtcb	100	95.842	Danio_rerio
ENSPMGG00000016672	rtcb	80	90.418	ENSDNOG00000012425	RTCB	99	90.418	Dasypus_novemcinctus
ENSPMGG00000016672	rtcb	100	94.257	ENSDORG00000010855	Rtcb	100	94.257	Dipodomys_ordii
ENSPMGG00000016672	rtcb	99	84.891	FBgn0032781	RtcB	99	84.891	Drosophila_melanogaster
ENSPMGG00000016672	rtcb	100	88.515	ENSETEG00000001988	RTCB	100	88.515	Echinops_telfairi
ENSPMGG00000016672	rtcb	100	85.743	ENSEBUG00000014235	rtcb	100	85.743	Eptatretus_burgeri
ENSPMGG00000016672	rtcb	100	94.851	ENSEASG00005019059	RTCB	100	94.851	Equus_asinus_asinus
ENSPMGG00000016672	rtcb	100	94.851	ENSECAG00000023998	RTCB	100	94.851	Equus_caballus
ENSPMGG00000016672	rtcb	89	86.130	ENSEEUG00000006251	RTCB	100	86.130	Erinaceus_europaeus
ENSPMGG00000016672	rtcb	100	83.176	ENSELUG00000009275	rtcb	100	83.176	Esox_lucius
ENSPMGG00000016672	rtcb	100	94.653	ENSFCAG00000026480	RTCB	100	94.653	Felis_catus
ENSPMGG00000016672	rtcb	100	94.851	ENSFALG00000013334	RTCB	100	94.851	Ficedula_albicollis
ENSPMGG00000016672	rtcb	100	94.455	ENSFDAG00000018150	RTCB	100	94.455	Fukomys_damarensis
ENSPMGG00000016672	rtcb	100	96.040	ENSFHEG00000009595	rtcb	100	96.040	Fundulus_heteroclitus
ENSPMGG00000016672	rtcb	100	92.475	ENSGMOG00000018882	rtcb	100	92.475	Gadus_morhua
ENSPMGG00000016672	rtcb	100	94.653	ENSGALG00000012611	RTCB	100	94.653	Gallus_gallus
ENSPMGG00000016672	rtcb	100	96.634	ENSGAFG00000004198	rtcb	100	96.634	Gambusia_affinis
ENSPMGG00000016672	rtcb	100	95.842	ENSGACG00000000586	rtcb	100	95.842	Gasterosteus_aculeatus
ENSPMGG00000016672	rtcb	93	92.340	ENSGAGG00000019133	RTCB	98	92.340	Gopherus_agassizii
ENSPMGG00000016672	rtcb	100	94.653	ENSGGOG00000011402	RTCB	100	94.653	Gorilla_gorilla
ENSPMGG00000016672	rtcb	100	95.248	ENSHBUG00000020571	rtcb	100	95.248	Haplochromis_burtoni
ENSPMGG00000016672	rtcb	100	94.455	ENSHGLG00000004492	RTCB	100	94.455	Heterocephalus_glaber_female
ENSPMGG00000016672	rtcb	93	67.804	ENSHGLG00000001066	-	99	67.804	Heterocephalus_glaber_female
ENSPMGG00000016672	rtcb	100	94.455	ENSHGLG00100008965	RTCB	100	94.455	Heterocephalus_glaber_male
ENSPMGG00000016672	rtcb	100	93.688	ENSHCOG00000006450	rtcb	100	93.688	Hippocampus_comes
ENSPMGG00000016672	rtcb	100	94.851	ENSIPUG00000015443	rtcb	100	94.851	Ictalurus_punctatus
ENSPMGG00000016672	rtcb	100	94.455	ENSSTOG00000003878	RTCB	100	94.455	Ictidomys_tridecemlineatus
ENSPMGG00000016672	rtcb	100	94.851	ENSJJAG00000010667	Rtcb	100	94.851	Jaculus_jaculus
ENSPMGG00000016672	rtcb	100	96.634	ENSKMAG00000013178	rtcb	100	96.634	Kryptolebias_marmoratus
ENSPMGG00000016672	rtcb	100	94.851	ENSLBEG00000000214	rtcb	100	94.851	Labrus_bergylta
ENSPMGG00000016672	rtcb	100	96.040	ENSLBEG00000010566	RTCB	100	96.040	Labrus_bergylta
ENSPMGG00000016672	rtcb	100	94.455	ENSLACG00000013033	RTCB	100	94.455	Latimeria_chalumnae
ENSPMGG00000016672	rtcb	100	95.446	ENSLOCG00000016515	rtcb	99	95.446	Lepisosteus_oculatus
ENSPMGG00000016672	rtcb	100	94.059	ENSLAFG00000002082	RTCB	100	94.059	Loxodonta_africana
ENSPMGG00000016672	rtcb	100	94.455	ENSMFAG00000034419	RTCB	100	94.455	Macaca_fascicularis
ENSPMGG00000016672	rtcb	100	94.455	ENSMMUG00000006720	RTCB	100	94.455	Macaca_mulatta
ENSPMGG00000016672	rtcb	100	94.455	ENSMNEG00000040669	RTCB	100	94.455	Macaca_nemestrina
ENSPMGG00000016672	rtcb	100	94.653	ENSMLEG00000040505	RTCB	100	94.653	Mandrillus_leucophaeus
ENSPMGG00000016672	rtcb	100	97.624	ENSMAMG00000020676	rtcb	100	97.624	Mastacembelus_armatus
ENSPMGG00000016672	rtcb	100	95.248	ENSMZEG00005018942	rtcb	100	95.248	Maylandia_zebra
ENSPMGG00000016672	rtcb	100	94.280	ENSMGAG00000012805	RTCB	100	94.280	Meleagris_gallopavo
ENSPMGG00000016672	rtcb	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSPMGG00000016672	rtcb	100	75.446	ENSMICG00000036677	-	100	75.446	Microcebus_murinus
ENSPMGG00000016672	rtcb	100	94.455	ENSMICG00000013303	-	100	94.455	Microcebus_murinus
ENSPMGG00000016672	rtcb	100	95.050	ENSMOCG00000002440	Rtcb	100	95.050	Microtus_ochrogaster
ENSPMGG00000016672	rtcb	100	97.030	ENSMMOG00000005987	rtcb	100	97.030	Mola_mola
ENSPMGG00000016672	rtcb	100	94.851	ENSMODG00000001414	RTCB	100	94.851	Monodelphis_domestica
ENSPMGG00000016672	rtcb	100	97.030	ENSMALG00000007603	rtcb	100	97.030	Monopterus_albus
ENSPMGG00000016672	rtcb	100	94.653	MGP_CAROLIEiJ_G0015689	Rtcb	100	94.653	Mus_caroli
ENSPMGG00000016672	rtcb	100	94.653	ENSMUSG00000001783	Rtcb	100	94.653	Mus_musculus
ENSPMGG00000016672	rtcb	100	94.653	MGP_PahariEiJ_G0031396	Rtcb	100	94.653	Mus_pahari
ENSPMGG00000016672	rtcb	100	94.653	MGP_SPRETEiJ_G0016507	Rtcb	100	94.653	Mus_spretus
ENSPMGG00000016672	rtcb	100	94.851	ENSMPUG00000012285	RTCB	100	94.851	Mustela_putorius_furo
ENSPMGG00000016672	rtcb	100	92.110	ENSMLUG00000007803	RTCB	100	92.110	Myotis_lucifugus
ENSPMGG00000016672	rtcb	72	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSPMGG00000016672	rtcb	100	95.248	ENSNBRG00000017202	rtcb	100	95.248	Neolamprologus_brichardi
ENSPMGG00000016672	rtcb	100	94.653	ENSNLEG00000004960	RTCB	100	94.653	Nomascus_leucogenys
ENSPMGG00000016672	rtcb	100	70.891	ENSMEUG00000007809	-	100	70.891	Notamacropus_eugenii
ENSPMGG00000016672	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSPMGG00000016672	rtcb	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSPMGG00000016672	rtcb	100	63.168	ENSODEG00000005042	-	100	63.168	Octodon_degus
ENSPMGG00000016672	rtcb	100	95.644	ENSONIG00000007474	rtcb	100	95.644	Oreochromis_niloticus
ENSPMGG00000016672	rtcb	100	94.455	ENSOANG00000005524	RTCB	100	94.455	Ornithorhynchus_anatinus
ENSPMGG00000016672	rtcb	93	94.255	ENSOCUG00000008270	RTCB	96	94.255	Oryctolagus_cuniculus
ENSPMGG00000016672	rtcb	100	96.238	ENSORLG00000020093	rtcb	100	96.238	Oryzias_latipes
ENSPMGG00000016672	rtcb	100	96.238	ENSORLG00020003706	rtcb	100	96.238	Oryzias_latipes_hni
ENSPMGG00000016672	rtcb	100	96.436	ENSORLG00015002968	rtcb	100	96.436	Oryzias_latipes_hsok
ENSPMGG00000016672	rtcb	100	96.040	ENSOMEG00000021278	rtcb	100	96.040	Oryzias_melastigma
ENSPMGG00000016672	rtcb	100	93.861	ENSOGAG00000001425	RTCB	100	93.861	Otolemur_garnettii
ENSPMGG00000016672	rtcb	100	94.851	ENSOARG00000018008	RTCB	100	94.851	Ovis_aries
ENSPMGG00000016672	rtcb	100	94.653	ENSPPAG00000028667	RTCB	100	94.653	Pan_paniscus
ENSPMGG00000016672	rtcb	100	94.653	ENSPPRG00000004038	RTCB	100	94.653	Panthera_pardus
ENSPMGG00000016672	rtcb	94	90.526	ENSPTIG00000020499	RTCB	97	91.579	Panthera_tigris_altaica
ENSPMGG00000016672	rtcb	100	94.653	ENSPTRG00000014287	RTCB	100	94.653	Pan_troglodytes
ENSPMGG00000016672	rtcb	100	94.455	ENSPANG00000016035	RTCB	100	94.455	Papio_anubis
ENSPMGG00000016672	rtcb	100	95.248	ENSPKIG00000001881	rtcb	100	95.248	Paramormyrops_kingsleyae
ENSPMGG00000016672	rtcb	91	94.348	ENSPSIG00000011690	RTCB	100	94.348	Pelodiscus_sinensis
ENSPMGG00000016672	rtcb	100	94.653	ENSPEMG00000019548	Rtcb	100	94.653	Peromyscus_maniculatus_bairdii
ENSPMGG00000016672	rtcb	100	90.891	ENSPMAG00000005657	rtcb	100	90.891	Petromyzon_marinus
ENSPMGG00000016672	rtcb	100	94.851	ENSPCIG00000009467	RTCB	100	94.851	Phascolarctos_cinereus
ENSPMGG00000016672	rtcb	100	96.634	ENSPFOG00000003058	rtcb	100	96.634	Poecilia_formosa
ENSPMGG00000016672	rtcb	100	96.436	ENSPLAG00000017663	rtcb	100	96.436	Poecilia_latipinna
ENSPMGG00000016672	rtcb	100	96.634	ENSPMEG00000006227	rtcb	100	96.634	Poecilia_mexicana
ENSPMGG00000016672	rtcb	100	96.040	ENSPREG00000018467	rtcb	100	96.040	Poecilia_reticulata
ENSPMGG00000016672	rtcb	100	94.653	ENSPPYG00000011752	RTCB	100	94.653	Pongo_abelii
ENSPMGG00000016672	rtcb	93	77.331	ENSPCAG00000013641	RTCB	100	77.331	Procavia_capensis
ENSPMGG00000016672	rtcb	100	94.653	ENSPCOG00000017243	RTCB	100	94.653	Propithecus_coquereli
ENSPMGG00000016672	rtcb	93	93.404	ENSPVAG00000002380	RTCB	100	93.404	Pteropus_vampyrus
ENSPMGG00000016672	rtcb	100	95.248	ENSPNYG00000022760	rtcb	100	95.248	Pundamilia_nyererei
ENSPMGG00000016672	rtcb	100	95.446	ENSPNAG00000009209	rtcb	100	95.446	Pygocentrus_nattereri
ENSPMGG00000016672	rtcb	100	94.653	ENSRNOG00000004813	Rtcb	100	94.653	Rattus_norvegicus
ENSPMGG00000016672	rtcb	100	86.561	ENSRBIG00000042090	RTCB	100	86.561	Rhinopithecus_bieti
ENSPMGG00000016672	rtcb	100	89.901	ENSSBOG00000020085	-	100	89.901	Saimiri_boliviensis_boliviensis
ENSPMGG00000016672	rtcb	94	95.148	ENSSHAG00000016277	RTCB	100	95.148	Sarcophilus_harrisii
ENSPMGG00000016672	rtcb	100	94.059	ENSSFOG00015011572	RTCB	100	94.059	Scleropages_formosus
ENSPMGG00000016672	rtcb	100	94.653	ENSSFOG00015000763	rtcb	100	94.653	Scleropages_formosus
ENSPMGG00000016672	rtcb	100	94.455	ENSSMAG00000005096	rtcb	100	94.455	Scophthalmus_maximus
ENSPMGG00000016672	rtcb	100	97.030	ENSSDUG00000012605	rtcb	100	97.030	Seriola_dumerili
ENSPMGG00000016672	rtcb	100	97.228	ENSSLDG00000019458	rtcb	100	97.228	Seriola_lalandi_dorsalis
ENSPMGG00000016672	rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSPMGG00000016672	rtcb	100	93.069	ENSSPUG00000012814	RTCB	100	93.069	Sphenodon_punctatus
ENSPMGG00000016672	rtcb	100	97.228	ENSSPAG00000004623	rtcb	100	97.228	Stegastes_partitus
ENSPMGG00000016672	rtcb	100	94.653	ENSSSCG00000000158	RTCB	100	94.653	Sus_scrofa
ENSPMGG00000016672	rtcb	100	94.851	ENSTGUG00000010947	RTCB	99	94.851	Taeniopygia_guttata
ENSPMGG00000016672	rtcb	91	96.957	ENSTRUG00000009880	rtcb	100	96.957	Takifugu_rubripes
ENSPMGG00000016672	rtcb	100	94.653	ENSTNIG00000002484	rtcb	100	94.653	Tetraodon_nigroviridis
ENSPMGG00000016672	rtcb	100	82.178	ENSTBEG00000004418	RTCB	100	82.178	Tupaia_belangeri
ENSPMGG00000016672	rtcb	93	93.404	ENSTTRG00000006417	RTCB	100	93.404	Tursiops_truncatus
ENSPMGG00000016672	rtcb	100	94.851	ENSUAMG00000022792	RTCB	100	94.851	Ursus_americanus
ENSPMGG00000016672	rtcb	100	94.851	ENSUMAG00000017225	RTCB	100	94.851	Ursus_maritimus
ENSPMGG00000016672	rtcb	100	94.455	ENSVPAG00000005375	RTCB	100	94.455	Vicugna_pacos
ENSPMGG00000016672	rtcb	100	94.851	ENSVVUG00000023408	RTCB	100	95.577	Vulpes_vulpes
ENSPMGG00000016672	rtcb	100	93.861	ENSXETG00000011523	rtcb	100	93.861	Xenopus_tropicalis
ENSPMGG00000016672	rtcb	100	96.238	ENSXMAG00000002855	rtcb	100	96.238	Xiphophorus_maculatus