EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000016741 (Gene tree)
Gene ID: -
Gene Symbol: scaf4a
Alias: -
Full Name: SR-related CTD-associated factor 4a
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 7766 bases
Position: chrKN463115.1:309108-316873
Accession: ZDB-GENE-030131-9003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000020672	RRM_1	PF00076.22	6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000022034	-	2823	-	ENSPMGP00000020672	940 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000016741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000016741's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000016741	scaf4a	54	61.429	ENSG00000156304	SCAF4	66	61.011	Homo_sapiens
ENSPMGG00000016741	scaf4a	68	69.928	ENSAPOG00000002946	scaf4a	100	51.309	Acanthochromis_polyacanthus
ENSPMGG00000016741	scaf4a	66	72.464	ENSAOCG00000000615	scaf4a	100	51.571	Amphiprion_ocellaris
ENSPMGG00000016741	scaf4a	88	72.464	ENSAPEG00000021229	scaf4a	100	51.396	Amphiprion_percula
ENSPMGG00000016741	scaf4a	78	75.974	ENSACAG00000002569	SCAF4	54	59.231	Anolis_carolinensis
ENSPMGG00000016741	scaf4a	78	60.627	ENSAMXG00000008585	scaf4a	73	57.508	Astyanax_mexicanus
ENSPMGG00000016741	scaf4a	99	51.542	ENSCSEG00000019549	scaf4a	97	48.587	Cynoglossus_semilaevis
ENSPMGG00000016741	scaf4a	75	50.409	ENSDARG00000077093	scaf4a	100	47.133	Danio_rerio
ENSPMGG00000016741	scaf4a	63	66.255	ENSELUG00000009909	scaf4a	67	69.744	Esox_lucius
ENSPMGG00000016741	scaf4a	80	64.609	ENSFHEG00000017866	scaf4a	72	68.952	Fundulus_heteroclitus
ENSPMGG00000016741	scaf4a	54	54.682	ENSGMOG00000015188	scaf4a	56	63.485	Gadus_morhua
ENSPMGG00000016741	scaf4a	50	68.182	ENSGAFG00000019460	scaf4a	78	66.548	Gambusia_affinis
ENSPMGG00000016741	scaf4a	66	65.328	ENSGACG00000020580	scaf4a	72	66.791	Gasterosteus_aculeatus
ENSPMGG00000016741	scaf4a	61	61.429	ENSGGOG00000015557	SCAF4	62	61.011	Gorilla_gorilla
ENSPMGG00000016741	scaf4a	67	52.075	ENSKMAG00000005742	scaf4b	79	51.331	Kryptolebias_marmoratus
ENSPMGG00000016741	scaf4a	93	52.536	ENSLBEG00000014675	scaf4a	100	51.447	Labrus_bergylta
ENSPMGG00000016741	scaf4a	61	49.860	ENSMAMG00000013223	scaf4a	83	49.459	Mastacembelus_armatus
ENSPMGG00000016741	scaf4a	78	61.232	ENSMODG00000021040	SCAF4	60	60.769	Monodelphis_domestica
ENSPMGG00000016741	scaf4a	83	72.180	ENSMALG00000013825	scaf4a	88	70.677	Monopterus_albus
ENSPMGG00000016741	scaf4a	76	70.968	ENSONIG00000004687	scaf4a	78	67.384	Oreochromis_niloticus
ENSPMGG00000016741	scaf4a	60	58.088	ENSORLG00000004384	scaf4a	59	57.833	Oryzias_latipes
ENSPMGG00000016741	scaf4a	78	41.911	ENSORLG00000003420	scaf4b	99	42.490	Oryzias_latipes
ENSPMGG00000016741	scaf4a	68	51.685	ENSORLG00020013853	scaf4b	79	52.290	Oryzias_latipes_hni
ENSPMGG00000016741	scaf4a	99	50.128	ENSORLG00020011857	scaf4a	59	57.856	Oryzias_latipes_hni
ENSPMGG00000016741	scaf4a	60	59.178	ENSORLG00015017880	scaf4a	81	46.786	Oryzias_latipes_hsok
ENSPMGG00000016741	scaf4a	73	66.784	ENSPFOG00000017156	scaf4a	78	65.248	Poecilia_formosa
ENSPMGG00000016741	scaf4a	50	68.182	ENSPLAG00000001972	scaf4a	64	70.850	Poecilia_latipinna
ENSPMGG00000016741	scaf4a	53	60.674	ENSPCOG00000018710	SCAF4	64	60.377	Propithecus_coquereli
ENSPMGG00000016741	scaf4a	57	66.071	ENSPNAG00000016892	scaf4a	75	60.690	Pygocentrus_nattereri
ENSPMGG00000016741	scaf4a	53	59.924	ENSSHAG00000001581	SCAF4	61	60.385	Sarcophilus_harrisii
ENSPMGG00000016741	scaf4a	97	50.132	ENSSMAG00000017901	scaf4a	99	48.778	Scophthalmus_maximus
ENSPMGG00000016741	scaf4a	97	52.281	ENSSDUG00000012918	scaf4a	94	57.724	Seriola_dumerili
ENSPMGG00000016741	scaf4a	78	53.762	ENSSLDG00000021671	scaf4a	62	50.136	Seriola_lalandi_dorsalis
ENSPMGG00000016741	scaf4a	61	49.228	ENSSLDG00000023152	-	52	43.735	Seriola_lalandi_dorsalis
ENSPMGG00000016741	scaf4a	64	56.364	ENSTRUG00000023543	scaf4a	88	48.750	Takifugu_rubripes
ENSPMGG00000016741	scaf4a	74	68.978	ENSTNIG00000009945	scaf4a	58	68.248	Tetraodon_nigroviridis
ENSPMGG00000016741	scaf4a	51	59.854	ENSXETG00000007351	scaf4	65	59.854	Xenopus_tropicalis