EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000017342 (Gene tree)
Gene ID: -
Gene Symbol: cirbpa
Alias: -
Full Name: cold inducible RNA binding protein a
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 916 bases
Position: chrKN463009.1:198815-199730
Accession: ZDB-GENE-050417-329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000021556	RRM_1	PF00076.22	7.5e-26	1	1
ENSPMGP00000021543	RRM_1	PF00076.22	9.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000022961	-	585	-	ENSPMGP00000021556	194 (aa)	-	-
ENSPMGT00000022948	-	678	-	ENSPMGP00000021543	225 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000017342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000017342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000017342	cirbpa	65	82.946	ENSAPOG00000004458	cirbpa	53	90.000	Acanthochromis_polyacanthus
ENSPMGG00000017342	cirbpa	95	70.968	ENSACIG00000016116	cirbpa	99	73.118	Amphilophus_citrinellus
ENSPMGG00000017342	cirbpa	95	73.514	ENSAOCG00000016212	cirbpa	99	68.108	Amphiprion_ocellaris
ENSPMGG00000017342	cirbpa	94	74.863	ENSAPEG00000011989	cirbpa	99	73.626	Amphiprion_percula
ENSPMGG00000017342	cirbpa	95	72.043	ENSATEG00000014985	cirbpa	99	69.780	Anabas_testudineus
ENSPMGG00000017342	cirbpa	94	74.054	ENSACLG00000002094	-	99	73.656	Astatotilapia_calliptera
ENSPMGG00000017342	cirbpa	95	57.214	ENSCSEG00000014344	cirbpa	99	56.931	Cynoglossus_semilaevis
ENSPMGG00000017342	cirbpa	95	74.468	ENSCVAG00000004853	cirbpa	99	76.630	Cyprinodon_variegatus
ENSPMGG00000017342	cirbpa	95	49.302	ENSDARG00000103672	cirbpa	98	56.701	Danio_rerio
ENSPMGG00000017342	cirbpa	95	54.634	ENSDARG00000013351	cirbpb	92	59.406	Danio_rerio
ENSPMGG00000017342	cirbpa	95	73.913	ENSFHEG00000002580	cirbpa	99	75.138	Fundulus_heteroclitus
ENSPMGG00000017342	cirbpa	95	57.071	ENSGMOG00000007179	cirbpb	98	53.807	Gadus_morhua
ENSPMGG00000017342	cirbpa	100	72.362	ENSGAFG00000008654	cirbpa	99	73.262	Gambusia_affinis
ENSPMGG00000017342	cirbpa	93	57.377	ENSGACG00000014978	-	58	82.178	Gasterosteus_aculeatus
ENSPMGG00000017342	cirbpa	94	62.963	ENSGACG00000015206	cirbpa	98	65.426	Gasterosteus_aculeatus
ENSPMGG00000017342	cirbpa	95	73.262	ENSHBUG00000022060	cirbpa	99	73.656	Haplochromis_burtoni
ENSPMGG00000017342	cirbpa	94	65.789	ENSKMAG00000005905	cirbpa	99	64.835	Kryptolebias_marmoratus
ENSPMGG00000017342	cirbpa	95	62.304	ENSLBEG00000000292	cirbpa	99	62.431	Labrus_bergylta
ENSPMGG00000017342	cirbpa	95	68.280	ENSMAMG00000010168	cirbpa	99	68.478	Mastacembelus_armatus
ENSPMGG00000017342	cirbpa	95	73.262	ENSMZEG00005025577	-	99	73.656	Maylandia_zebra
ENSPMGG00000017342	cirbpa	94	70.109	ENSMALG00000020092	cirbpa	99	70.166	Monopterus_albus
ENSPMGG00000017342	cirbpa	95	73.262	ENSNBRG00000019658	cirbpa	99	73.656	Neolamprologus_brichardi
ENSPMGG00000017342	cirbpa	95	70.968	ENSONIG00000010169	cirbpa	99	73.656	Oreochromis_niloticus
ENSPMGG00000017342	cirbpa	95	67.368	ENSORLG00000015433	cirbpa	99	71.196	Oryzias_latipes
ENSPMGG00000017342	cirbpa	95	67.368	ENSORLG00020016909	cirbpa	99	71.196	Oryzias_latipes_hni
ENSPMGG00000017342	cirbpa	95	67.368	ENSORLG00015016636	cirbpa	99	71.196	Oryzias_latipes_hsok
ENSPMGG00000017342	cirbpa	95	68.947	ENSOMEG00000021469	cirbpa	72	71.823	Oryzias_melastigma
ENSPMGG00000017342	cirbpa	95	72.632	ENSPFOG00000015653	cirbpa	99	76.757	Poecilia_formosa
ENSPMGG00000017342	cirbpa	95	74.074	ENSPLAG00000011125	cirbpa	100	76.064	Poecilia_latipinna
ENSPMGG00000017342	cirbpa	95	73.016	ENSPMEG00000013878	cirbpa	99	76.757	Poecilia_mexicana
ENSPMGG00000017342	cirbpa	100	70.854	ENSPREG00000018042	cirbpa	99	71.795	Poecilia_reticulata
ENSPMGG00000017342	cirbpa	95	73.262	ENSPNYG00000007198	-	99	72.487	Pundamilia_nyererei
ENSPMGG00000017342	cirbpa	95	53.623	ENSPNAG00000019997	cirbpb	57	52.672	Pygocentrus_nattereri
ENSPMGG00000017342	cirbpa	95	55.556	ENSSFOG00015005346	cirbpb	99	60.963	Scleropages_formosus
ENSPMGG00000017342	cirbpa	95	64.322	ENSSMAG00000002412	cirbpa	99	58.673	Scophthalmus_maximus
ENSPMGG00000017342	cirbpa	93	67.956	ENSSPAG00000023037	cirbpa	97	61.905	Stegastes_partitus
ENSPMGG00000017342	cirbpa	95	64.130	ENSTRUG00000010187	cirbpa	99	63.043	Takifugu_rubripes
ENSPMGG00000017342	cirbpa	95	66.848	ENSTNIG00000000450	cirbpa	99	66.138	Tetraodon_nigroviridis
ENSPMGG00000017342	cirbpa	95	73.545	ENSXCOG00000008262	cirbpa	92	91.781	Xiphophorus_couchianus
ENSPMGG00000017342	cirbpa	95	73.016	ENSXMAG00000019336	cirbpa	99	72.973	Xiphophorus_maculatus