EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000017463 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 8052 bases
Position: chrKN468340.1:6-8057
Accession: ZDB-GENE-040718-407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000021588	RNase_H	PF00075.24	7.3e-40	1	1
ENSPMGP00000021601	RNase_H	PF00075.24	3.2e-33	1	1
ENSPMGP00000021604	RNase_H	PF00075.24	2.6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000023009	-	903	-	ENSPMGP00000021604	300 (aa)	-	-
ENSPMGT00000023005	-	822	-	ENSPMGP00000021601	273 (aa)	-	-
ENSPMGT00000022993	-	774	-	ENSPMGP00000021588	258 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000017463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000017463's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000017463	rnaseh1	90	52.510	ENSG00000171865	RNASEH1	89	52.510	Homo_sapiens
ENSPMGG00000017463	rnaseh1	99	66.207	ENSAPOG00000000412	rnaseh1	96	66.897	Acanthochromis_polyacanthus
ENSPMGG00000017463	rnaseh1	90	55.336	ENSAMEG00000018433	RNASEH1	89	55.336	Ailuropoda_melanoleuca
ENSPMGG00000017463	rnaseh1	99	65.141	ENSACIG00000014666	rnaseh1	95	65.493	Amphilophus_citrinellus
ENSPMGG00000017463	rnaseh1	99	66.552	ENSAOCG00000015210	rnaseh1	96	67.586	Amphiprion_ocellaris
ENSPMGG00000017463	rnaseh1	99	67.241	ENSAPEG00000014104	rnaseh1	96	68.276	Amphiprion_percula
ENSPMGG00000017463	rnaseh1	99	67.241	ENSATEG00000000598	rnaseh1	99	65.845	Anabas_testudineus
ENSPMGG00000017463	rnaseh1	85	52.344	ENSAPLG00000001961	RNASEH1	99	52.344	Anas_platyrhynchos
ENSPMGG00000017463	rnaseh1	87	57.955	ENSACAG00000016857	rnaseh1	94	42.345	Anolis_carolinensis
ENSPMGG00000017463	rnaseh1	90	54.054	ENSANAG00000024055	RNASEH1	89	54.054	Aotus_nancymaae
ENSPMGG00000017463	rnaseh1	99	62.712	ENSACLG00000006741	rnaseh1	96	61.538	Astatotilapia_calliptera
ENSPMGG00000017463	rnaseh1	99	52.190	ENSAMXG00000042940	rnaseh1	97	53.788	Astyanax_mexicanus
ENSPMGG00000017463	rnaseh1	90	56.126	ENSBTAG00000016235	RNASEH1	90	56.126	Bos_taurus
ENSPMGG00000017463	rnaseh1	93	38.911	WBGene00004382	rnh-1.0	97	39.357	Caenorhabditis_elegans
ENSPMGG00000017463	rnaseh1	90	52.273	ENSCJAG00000035450	RNASEH1	89	52.273	Callithrix_jacchus
ENSPMGG00000017463	rnaseh1	98	52.297	ENSCAFG00000003259	RNASEH1	98	52.297	Canis_familiaris
ENSPMGG00000017463	rnaseh1	56	65.101	ENSCAFG00020004994	RNASEH1	96	65.101	Canis_lupus_dingo
ENSPMGG00000017463	rnaseh1	90	56.126	ENSCHIG00000022264	-	89	56.126	Capra_hircus
ENSPMGG00000017463	rnaseh1	85	41.152	ENSCHIG00000022230	-	98	44.304	Capra_hircus
ENSPMGG00000017463	rnaseh1	90	53.516	ENSTSYG00000012926	RNASEH1	89	53.516	Carlito_syrichta
ENSPMGG00000017463	rnaseh1	83	54.959	ENSCAPG00000004813	RNASEH1	98	54.959	Cavia_aperea
ENSPMGG00000017463	rnaseh1	90	54.826	ENSCPOG00000022278	Rnaseh1	86	54.826	Cavia_porcellus
ENSPMGG00000017463	rnaseh1	98	50.347	ENSCCAG00000038017	RNASEH1	98	50.347	Cebus_capucinus
ENSPMGG00000017463	rnaseh1	90	52.896	ENSCATG00000016515	-	89	52.896	Cercocebus_atys
ENSPMGG00000017463	rnaseh1	90	50.800	ENSCATG00000016818	-	89	50.800	Cercocebus_atys
ENSPMGG00000017463	rnaseh1	90	54.826	ENSCLAG00000002440	RNASEH1	89	54.826	Chinchilla_lanigera
ENSPMGG00000017463	rnaseh1	90	54.510	ENSCSAG00000006943	RNASEH1	89	54.510	Chlorocebus_sabaeus
ENSPMGG00000017463	rnaseh1	64	60.571	ENSCHOG00000008547	RNASEH1	86	60.571	Choloepus_hoffmanni
ENSPMGG00000017463	rnaseh1	97	47.331	ENSCPBG00000021620	RNASEH1	98	53.383	Chrysemys_picta_bellii
ENSPMGG00000017463	rnaseh1	90	33.333	ENSCING00000014054	-	92	33.333	Ciona_intestinalis
ENSPMGG00000017463	rnaseh1	77	33.482	ENSCSAVG00000000009	-	96	36.199	Ciona_savignyi
ENSPMGG00000017463	rnaseh1	90	53.282	ENSCANG00000037763	RNASEH1	89	53.282	Colobus_angolensis_palliatus
ENSPMGG00000017463	rnaseh1	90	54.331	ENSCGRG00001008950	Rnaseh1	89	56.299	Cricetulus_griseus_chok1gshd
ENSPMGG00000017463	rnaseh1	90	54.331	ENSCGRG00000006029	Rnaseh1	89	56.299	Cricetulus_griseus_crigri
ENSPMGG00000017463	rnaseh1	99	61.232	ENSCSEG00000005741	rnaseh1	96	61.837	Cynoglossus_semilaevis
ENSPMGG00000017463	rnaseh1	99	65.734	ENSCVAG00000018717	rnaseh1	96	65.292	Cyprinodon_variegatus
ENSPMGG00000017463	rnaseh1	93	59.779	ENSDARG00000042571	rnaseh1	97	61.481	Danio_rerio
ENSPMGG00000017463	rnaseh1	90	54.297	ENSDNOG00000016056	RNASEH1	89	54.297	Dasypus_novemcinctus
ENSPMGG00000017463	rnaseh1	90	53.755	ENSDORG00000000704	Rnaseh1	89	53.755	Dipodomys_ordii
ENSPMGG00000017463	rnaseh1	92	32.653	FBgn0023171	rnh1	92	34.602	Drosophila_melanogaster
ENSPMGG00000017463	rnaseh1	98	49.823	ENSETEG00000012674	RNASEH1	98	49.823	Echinops_telfairi
ENSPMGG00000017463	rnaseh1	89	42.857	ENSEBUG00000008898	rnaseh1	97	42.857	Eptatretus_burgeri
ENSPMGG00000017463	rnaseh1	89	46.429	ENSEBUG00000006116	rnaseh1	77	46.429	Eptatretus_burgeri
ENSPMGG00000017463	rnaseh1	90	56.078	ENSEASG00005022200	RNASEH1	87	56.078	Equus_asinus_asinus
ENSPMGG00000017463	rnaseh1	90	56.078	ENSECAG00000020695	RNASEH1	87	56.078	Equus_caballus
ENSPMGG00000017463	rnaseh1	99	63.481	ENSELUG00000010112	rnaseh1	100	62.500	Esox_lucius
ENSPMGG00000017463	rnaseh1	98	52.143	ENSFCAG00000025832	RNASEH1	98	52.143	Felis_catus
ENSPMGG00000017463	rnaseh1	95	51.916	ENSFALG00000002069	RNASEH1	96	52.265	Ficedula_albicollis
ENSPMGG00000017463	rnaseh1	90	54.545	ENSFDAG00000002035	RNASEH1	79	54.545	Fukomys_damarensis
ENSPMGG00000017463	rnaseh1	83	42.857	ENSFHEG00000019613	rnaseh1	79	42.857	Fundulus_heteroclitus
ENSPMGG00000017463	rnaseh1	99	62.455	ENSGMOG00000013818	rnaseh1	98	62.455	Gadus_morhua
ENSPMGG00000017463	rnaseh1	92	52.920	ENSGALG00000016389	RNASEH1	94	52.920	Gallus_gallus
ENSPMGG00000017463	rnaseh1	98	63.230	ENSGAFG00000001776	rnaseh1	98	63.230	Gambusia_affinis
ENSPMGG00000017463	rnaseh1	99	61.806	ENSGACG00000011935	rnaseh1	98	61.806	Gasterosteus_aculeatus
ENSPMGG00000017463	rnaseh1	99	51.678	ENSGAGG00000009150	RNASEH1	68	51.007	Gopherus_agassizii
ENSPMGG00000017463	rnaseh1	90	54.118	ENSGGOG00000034822	RNASEH1	89	54.118	Gorilla_gorilla
ENSPMGG00000017463	rnaseh1	99	62.034	ENSHBUG00000004666	rnaseh1	96	61.667	Haplochromis_burtoni
ENSPMGG00000017463	rnaseh1	90	54.545	ENSHGLG00000002585	Rnaseh1	82	54.545	Heterocephalus_glaber_female
ENSPMGG00000017463	rnaseh1	90	54.545	ENSHGLG00100005105	Rnaseh1	82	54.545	Heterocephalus_glaber_male
ENSPMGG00000017463	rnaseh1	99	60.811	ENSHCOG00000012329	rnaseh1	98	60.726	Hippocampus_comes
ENSPMGG00000017463	rnaseh1	99	59.489	ENSIPUG00000023060	rnaseh1	97	62.000	Ictalurus_punctatus
ENSPMGG00000017463	rnaseh1	90	54.331	ENSSTOG00000012774	RNASEH1	91	54.331	Ictidomys_tridecemlineatus
ENSPMGG00000017463	rnaseh1	87	46.531	ENSJJAG00000008994	-	88	46.531	Jaculus_jaculus
ENSPMGG00000017463	rnaseh1	90	53.441	ENSJJAG00000021481	-	89	53.441	Jaculus_jaculus
ENSPMGG00000017463	rnaseh1	81	55.263	ENSJJAG00000020238	Rnaseh1	90	55.263	Jaculus_jaculus
ENSPMGG00000017463	rnaseh1	94	65.779	ENSKMAG00000001373	rnaseh1	90	65.779	Kryptolebias_marmoratus
ENSPMGG00000017463	rnaseh1	99	67.391	ENSLBEG00000004480	rnaseh1	98	68.045	Labrus_bergylta
ENSPMGG00000017463	rnaseh1	95	50.515	ENSLACG00000007100	RNASEH1	94	50.859	Latimeria_chalumnae
ENSPMGG00000017463	rnaseh1	94	54.909	ENSLOCG00000017212	rnaseh1	98	57.143	Lepisosteus_oculatus
ENSPMGG00000017463	rnaseh1	90	55.294	ENSLAFG00000015091	RNASEH1	89	55.294	Loxodonta_africana
ENSPMGG00000017463	rnaseh1	90	54.510	ENSMFAG00000000063	-	89	54.510	Macaca_fascicularis
ENSPMGG00000017463	rnaseh1	91	51.575	ENSMFAG00000002323	-	90	51.575	Macaca_fascicularis
ENSPMGG00000017463	rnaseh1	91	51.575	ENSMMUG00000019280	-	90	51.575	Macaca_mulatta
ENSPMGG00000017463	rnaseh1	90	54.902	ENSMNEG00000040183	-	89	54.902	Macaca_nemestrina
ENSPMGG00000017463	rnaseh1	91	51.575	ENSMNEG00000029676	-	90	51.575	Macaca_nemestrina
ENSPMGG00000017463	rnaseh1	91	52.756	ENSMLEG00000028662	-	90	52.756	Mandrillus_leucophaeus
ENSPMGG00000017463	rnaseh1	83	52.479	ENSMLEG00000039352	-	98	52.479	Mandrillus_leucophaeus
ENSPMGG00000017463	rnaseh1	99	65.517	ENSMAMG00000019725	rnaseh1	95	66.914	Mastacembelus_armatus
ENSPMGG00000017463	rnaseh1	99	62.712	ENSMZEG00005013006	rnaseh1	96	61.538	Maylandia_zebra
ENSPMGG00000017463	rnaseh1	79	51.867	ENSMGAG00000013979	RNASEH1	98	51.867	Meleagris_gallopavo
ENSPMGG00000017463	rnaseh1	90	55.906	ENSMAUG00000014957	Rnaseh1	89	55.906	Mesocricetus_auratus
ENSPMGG00000017463	rnaseh1	90	56.126	ENSMICG00000033156	RNASEH1	88	56.126	Microcebus_murinus
ENSPMGG00000017463	rnaseh1	90	55.253	ENSMOCG00000015522	Rnaseh1	89	55.253	Microtus_ochrogaster
ENSPMGG00000017463	rnaseh1	99	63.415	ENSMMOG00000015902	rnaseh1	96	63.415	Mola_mola
ENSPMGG00000017463	rnaseh1	78	50.224	ENSMODG00000028814	-	91	50.224	Monodelphis_domestica
ENSPMGG00000017463	rnaseh1	90	55.556	ENSMODG00000014491	-	88	55.556	Monodelphis_domestica
ENSPMGG00000017463	rnaseh1	99	61.034	ENSMALG00000010565	rnaseh1	99	59.016	Monopterus_albus
ENSPMGG00000017463	rnaseh1	90	55.906	MGP_CAROLIEiJ_G0017660	Rnaseh1	89	55.906	Mus_caroli
ENSPMGG00000017463	rnaseh1	90	55.512	ENSMUSG00000020630	Rnaseh1	89	55.512	Mus_musculus
ENSPMGG00000017463	rnaseh1	90	53.077	MGP_PahariEiJ_G0029418	Rnaseh1	89	55.906	Mus_pahari
ENSPMGG00000017463	rnaseh1	90	55.512	MGP_SPRETEiJ_G0018502	Rnaseh1	89	55.512	Mus_spretus
ENSPMGG00000017463	rnaseh1	64	60.000	ENSMPUG00000012984	RNASEH1	85	60.000	Mustela_putorius_furo
ENSPMGG00000017463	rnaseh1	90	54.688	ENSNGAG00000015966	Rnaseh1	84	54.688	Nannospalax_galili
ENSPMGG00000017463	rnaseh1	99	62.034	ENSNBRG00000008739	rnaseh1	96	60.870	Neolamprologus_brichardi
ENSPMGG00000017463	rnaseh1	82	48.485	ENSNLEG00000000059	-	88	48.485	Nomascus_leucogenys
ENSPMGG00000017463	rnaseh1	92	43.561	ENSNLEG00000015400	RNASEH1	87	45.211	Nomascus_leucogenys
ENSPMGG00000017463	rnaseh1	89	38.554	ENSMEUG00000003610	-	89	38.554	Notamacropus_eugenii
ENSPMGG00000017463	rnaseh1	90	55.294	ENSOPRG00000005072	RNASEH1	89	55.294	Ochotona_princeps
ENSPMGG00000017463	rnaseh1	98	53.091	ENSODEG00000000235	Rnaseh1	94	53.091	Octodon_degus
ENSPMGG00000017463	rnaseh1	94	62.909	ENSONIG00000018697	rnaseh1	99	63.669	Oreochromis_niloticus
ENSPMGG00000017463	rnaseh1	90	55.686	ENSOCUG00000006117	RNASEH1	89	55.686	Oryctolagus_cuniculus
ENSPMGG00000017463	rnaseh1	94	64.925	ENSORLG00000018127	rnaseh1	96	66.792	Oryzias_latipes
ENSPMGG00000017463	rnaseh1	99	64.111	ENSORLG00020013660	rnaseh1	96	64.111	Oryzias_latipes_hni
ENSPMGG00000017463	rnaseh1	99	64.111	ENSORLG00015011338	rnaseh1	96	64.111	Oryzias_latipes_hsok
ENSPMGG00000017463	rnaseh1	91	63.359	ENSOMEG00000004710	rnaseh1	99	63.359	Oryzias_melastigma
ENSPMGG00000017463	rnaseh1	90	55.253	ENSOGAG00000017176	RNASEH1	89	55.253	Otolemur_garnettii
ENSPMGG00000017463	rnaseh1	98	46.021	ENSOARG00000005386	RNASEH1	98	46.021	Ovis_aries
ENSPMGG00000017463	rnaseh1	90	52.510	ENSPPAG00000034221	RNASEH1	89	52.510	Pan_paniscus
ENSPMGG00000017463	rnaseh1	98	52.143	ENSPPRG00000015513	RNASEH1	98	52.143	Panthera_pardus
ENSPMGG00000017463	rnaseh1	83	56.170	ENSPTIG00000019034	RNASEH1	83	56.170	Panthera_tigris_altaica
ENSPMGG00000017463	rnaseh1	85	44.400	ENSPTRG00000043403	-	91	47.131	Pan_troglodytes
ENSPMGG00000017463	rnaseh1	90	52.510	ENSPTRG00000011614	RNASEH1	89	52.510	Pan_troglodytes
ENSPMGG00000017463	rnaseh1	90	54.902	ENSPANG00000000443	RNASEH1	97	54.812	Papio_anubis
ENSPMGG00000017463	rnaseh1	90	51.600	ENSPANG00000018246	-	88	51.600	Papio_anubis
ENSPMGG00000017463	rnaseh1	91	59.091	ENSPKIG00000003146	rnaseh1	99	58.271	Paramormyrops_kingsleyae
ENSPMGG00000017463	rnaseh1	90	51.493	ENSPSIG00000002937	RNASEH1	98	51.493	Pelodiscus_sinensis
ENSPMGG00000017463	rnaseh1	90	54.688	ENSPEMG00000022465	-	89	55.859	Peromyscus_maniculatus_bairdii
ENSPMGG00000017463	rnaseh1	90	52.381	ENSPCIG00000023334	-	88	52.381	Phascolarctos_cinereus
ENSPMGG00000017463	rnaseh1	55	35.570	ENSPCIG00000026047	-	84	35.570	Phascolarctos_cinereus
ENSPMGG00000017463	rnaseh1	99	63.574	ENSPFOG00000002841	rnaseh1	98	63.574	Poecilia_formosa
ENSPMGG00000017463	rnaseh1	64	56.383	ENSPLAG00000021349	-	77	56.383	Poecilia_latipinna
ENSPMGG00000017463	rnaseh1	99	63.918	ENSPMEG00000016826	rnaseh1	98	63.918	Poecilia_mexicana
ENSPMGG00000017463	rnaseh1	99	61.616	ENSPREG00000012197	rnaseh1	98	61.616	Poecilia_reticulata
ENSPMGG00000017463	rnaseh1	90	48.523	ENSPPYG00000025873	RNASEH1	88	48.523	Pongo_abelii
ENSPMGG00000017463	rnaseh1	82	49.787	ENSPPYG00000008067	-	90	49.787	Pongo_abelii
ENSPMGG00000017463	rnaseh1	92	51.163	ENSPCAG00000002500	RNASEH1	89	52.490	Procavia_capensis
ENSPMGG00000017463	rnaseh1	92	50.584	ENSPCOG00000019444	RNASEH1	88	51.807	Propithecus_coquereli
ENSPMGG00000017463	rnaseh1	97	52.015	ENSPVAG00000002070	RNASEH1	94	52.015	Pteropus_vampyrus
ENSPMGG00000017463	rnaseh1	99	63.051	ENSPNYG00000001292	rnaseh1	96	61.873	Pundamilia_nyererei
ENSPMGG00000017463	rnaseh1	99	60.932	ENSPNAG00000022344	rnaseh1	98	60.932	Pygocentrus_nattereri
ENSPMGG00000017463	rnaseh1	90	53.937	ENSRNOG00000008584	Rnaseh1	89	55.906	Rattus_norvegicus
ENSPMGG00000017463	rnaseh1	90	53.668	ENSRBIG00000034222	RNASEH1	88	53.668	Rhinopithecus_bieti
ENSPMGG00000017463	rnaseh1	90	53.668	ENSRROG00000041761	RNASEH1	88	53.668	Rhinopithecus_roxellana
ENSPMGG00000017463	rnaseh1	91	46.000	YMR234W	-	95	35.165	Saccharomyces_cerevisiae
ENSPMGG00000017463	rnaseh1	98	49.306	ENSSBOG00000025411	RNASEH1	98	49.306	Saimiri_boliviensis_boliviensis
ENSPMGG00000017463	rnaseh1	90	56.972	ENSSHAG00000013051	RNASEH1	87	56.972	Sarcophilus_harrisii
ENSPMGG00000017463	rnaseh1	99	60.153	ENSSFOG00015002709	rnaseh1	98	60.153	Scleropages_formosus
ENSPMGG00000017463	rnaseh1	99	65.862	ENSSMAG00000007586	rnaseh1	99	64.401	Scophthalmus_maximus
ENSPMGG00000017463	rnaseh1	98	64.311	ENSSDUG00000008217	rnaseh1	99	65.035	Seriola_dumerili
ENSPMGG00000017463	rnaseh1	93	60.949	ENSSLDG00000000442	rnaseh1	95	65.079	Seriola_lalandi_dorsalis
ENSPMGG00000017463	rnaseh1	90	51.128	ENSSPUG00000006644	RNASEH1	92	51.128	Sphenodon_punctatus
ENSPMGG00000017463	rnaseh1	99	65.172	ENSSPAG00000009353	rnaseh1	96	65.862	Stegastes_partitus
ENSPMGG00000017463	rnaseh1	90	56.471	ENSSSCG00000025305	RNASEH1	89	56.471	Sus_scrofa
ENSPMGG00000017463	rnaseh1	95	51.736	ENSTGUG00000012980	RNASEH1	96	52.778	Taeniopygia_guttata
ENSPMGG00000017463	rnaseh1	96	61.786	ENSTRUG00000015774	rnaseh1	96	62.454	Takifugu_rubripes
ENSPMGG00000017463	rnaseh1	94	65.672	ENSTNIG00000010715	rnaseh1	97	65.672	Tetraodon_nigroviridis
ENSPMGG00000017463	rnaseh1	90	53.150	ENSTTRG00000001615	RNASEH1	89	53.150	Tursiops_truncatus
ENSPMGG00000017463	rnaseh1	59	63.226	ENSUAMG00000018254	RNASEH1	80	63.226	Ursus_americanus
ENSPMGG00000017463	rnaseh1	67	53.846	ENSUMAG00000003941	RNASEH1	65	53.846	Ursus_maritimus
ENSPMGG00000017463	rnaseh1	90	47.451	ENSVPAG00000011589	RNASEH1	89	47.451	Vicugna_pacos
ENSPMGG00000017463	rnaseh1	98	51.761	ENSVVUG00000008633	RNASEH1	88	51.761	Vulpes_vulpes
ENSPMGG00000017463	rnaseh1	99	49.829	ENSXETG00000001212	rnaseh1	99	49.829	Xenopus_tropicalis
ENSPMGG00000017463	rnaseh1	89	43.777	ENSXETG00000030371	-	98	43.777	Xenopus_tropicalis
ENSPMGG00000017463	rnaseh1	99	63.230	ENSXMAG00000002357	rnaseh1	99	62.416	Xiphophorus_maculatus