EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000017735 (Gene tree)
Gene ID: -
Gene Symbol: cpsf4
Alias: -
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 2453 bases
Position: chrKN464051.1:155815-158267
Accession: ZDB-GENE-990415-180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000021903	zf-CCCH	PF00642.24	1.4e-18	1	2
ENSPMGP00000021903	zf-CCCH	PF00642.24	1.4e-18	2	2
ENSPMGP00000021903	zf-CCHC	PF00098.23	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000023329	-	693	-	ENSPMGP00000021903	230 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000017735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000017735's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000017735	cpsf4	100	78.862	ENSG00000160917	CPSF4	100	98.214	Homo_sapiens
ENSPMGG00000017735	cpsf4	65	71.751	ENSAPOG00000004921	cpsf4	100	71.751	Acanthochromis_polyacanthus
ENSPMGG00000017735	cpsf4	100	71.587	ENSAMEG00000006252	CPSF4	100	72.862	Ailuropoda_melanoleuca
ENSPMGG00000017735	cpsf4	100	86.722	ENSACIG00000009248	cpsf4	100	87.137	Amphilophus_citrinellus
ENSPMGG00000017735	cpsf4	100	78.491	ENSAOCG00000019616	cpsf4	100	78.491	Amphiprion_ocellaris
ENSPMGG00000017735	cpsf4	100	78.491	ENSAPEG00000011679	cpsf4	100	78.491	Amphiprion_percula
ENSPMGG00000017735	cpsf4	100	85.425	ENSATEG00000007010	cpsf4	100	85.425	Anabas_testudineus
ENSPMGG00000017735	cpsf4	100	71.004	ENSACAG00000012941	CPSF4	89	72.862	Anolis_carolinensis
ENSPMGG00000017735	cpsf4	100	71.747	ENSANAG00000021360	CPSF4	100	72.862	Aotus_nancymaae
ENSPMGG00000017735	cpsf4	100	81.513	ENSACLG00000010374	cpsf4	100	81.513	Astatotilapia_calliptera
ENSPMGG00000017735	cpsf4	100	74.444	ENSAMXG00000031647	cpsf4	100	74.444	Astyanax_mexicanus
ENSPMGG00000017735	cpsf4	100	77.959	ENSBTAG00000002090	CPSF4	100	80.658	Bos_taurus
ENSPMGG00000017735	cpsf4	100	71.747	ENSCJAG00000015826	CPSF4	100	72.862	Callithrix_jacchus
ENSPMGG00000017735	cpsf4	100	71.587	ENSCAFG00000015036	CPSF4	99	87.117	Canis_familiaris
ENSPMGG00000017735	cpsf4	100	74.427	ENSCAFG00020014462	CPSF4	100	75.954	Canis_lupus_dingo
ENSPMGG00000017735	cpsf4	100	71.747	ENSCHIG00000014313	CPSF4	100	72.862	Capra_hircus
ENSPMGG00000017735	cpsf4	100	79.268	ENSTSYG00000005712	-	100	81.148	Carlito_syrichta
ENSPMGG00000017735	cpsf4	100	71.660	ENSTSYG00000014604	-	100	73.061	Carlito_syrichta
ENSPMGG00000017735	cpsf4	87	72.936	ENSTSYG00000008195	-	99	75.111	Carlito_syrichta
ENSPMGG00000017735	cpsf4	82	74.429	ENSCAPG00000013881	CPSF4	93	72.650	Cavia_aperea
ENSPMGG00000017735	cpsf4	100	78.862	ENSCPOG00000001783	CPSF4	100	80.738	Cavia_porcellus
ENSPMGG00000017735	cpsf4	100	71.747	ENSCCAG00000028291	CPSF4	100	72.862	Cebus_capucinus
ENSPMGG00000017735	cpsf4	100	76.569	ENSCATG00000038440	CPSF4	100	76.569	Cercocebus_atys
ENSPMGG00000017735	cpsf4	100	71.587	ENSCLAG00000007050	CPSF4	100	72.862	Chinchilla_lanigera
ENSPMGG00000017735	cpsf4	100	71.747	ENSCSAG00000017795	CPSF4	100	72.862	Chlorocebus_sabaeus
ENSPMGG00000017735	cpsf4	69	71.687	ENSCPBG00000010269	-	100	71.687	Chrysemys_picta_bellii
ENSPMGG00000017735	cpsf4	80	74.074	ENSCPBG00000020869	CPSF4	100	76.852	Chrysemys_picta_bellii
ENSPMGG00000017735	cpsf4	97	55.217	ENSCING00000021080	-	75	55.217	Ciona_intestinalis
ENSPMGG00000017735	cpsf4	96	49.822	ENSCSAVG00000011469	-	97	49.822	Ciona_savignyi
ENSPMGG00000017735	cpsf4	100	76.987	ENSCANG00000019384	CPSF4	100	76.987	Colobus_angolensis_palliatus
ENSPMGG00000017735	cpsf4	100	78.862	ENSCGRG00001024184	Cpsf4	100	80.738	Cricetulus_griseus_chok1gshd
ENSPMGG00000017735	cpsf4	100	71.587	ENSCGRG00000013892	Cpsf4	100	72.862	Cricetulus_griseus_crigri
ENSPMGG00000017735	cpsf4	100	78.868	ENSCSEG00000019055	cpsf4	100	78.868	Cynoglossus_semilaevis
ENSPMGG00000017735	cpsf4	100	78.113	ENSCVAG00000016528	cpsf4	100	78.113	Cyprinodon_variegatus
ENSPMGG00000017735	cpsf4	100	74.908	ENSDARG00000020217	cpsf4	100	74.908	Danio_rerio
ENSPMGG00000017735	cpsf4	100	71.747	ENSDNOG00000006344	CPSF4	100	72.862	Dasypus_novemcinctus
ENSPMGG00000017735	cpsf4	81	74.194	ENSDORG00000000742	Cpsf4	100	75.576	Dipodomys_ordii
ENSPMGG00000017735	cpsf4	100	51.027	FBgn0015621	Clp	99	51.027	Drosophila_melanogaster
ENSPMGG00000017735	cpsf4	78	95.455	ENSETEG00000002608	CPSF4	70	95.455	Echinops_telfairi
ENSPMGG00000017735	cpsf4	99	66.807	ENSEBUG00000012552	cpsf4	98	66.807	Eptatretus_burgeri
ENSPMGG00000017735	cpsf4	100	78.862	ENSEASG00005002487	CPSF4	100	80.738	Equus_asinus_asinus
ENSPMGG00000017735	cpsf4	100	71.587	ENSECAG00000007525	CPSF4	100	72.862	Equus_caballus
ENSPMGG00000017735	cpsf4	53	100.000	ENSEEUG00000002158	CPSF4	66	100.000	Erinaceus_europaeus
ENSPMGG00000017735	cpsf4	100	73.897	ENSELUG00000011481	cpsf4	100	73.897	Esox_lucius
ENSPMGG00000017735	cpsf4	100	71.587	ENSFCAG00000015070	CPSF4	100	72.862	Felis_catus
ENSPMGG00000017735	cpsf4	68	58.537	ENSFALG00000012906	-	100	58.537	Ficedula_albicollis
ENSPMGG00000017735	cpsf4	100	79.424	ENSFALG00000013799	CPSF4	100	79.424	Ficedula_albicollis
ENSPMGG00000017735	cpsf4	89	69.959	ENSFDAG00000014092	CPSF4	100	70.782	Fukomys_damarensis
ENSPMGG00000017735	cpsf4	100	78.113	ENSFHEG00000010880	cpsf4	100	78.113	Fundulus_heteroclitus
ENSPMGG00000017735	cpsf4	100	78.764	ENSGMOG00000002330	cpsf4	100	78.764	Gadus_morhua
ENSPMGG00000017735	cpsf4	66	37.079	ENSGALG00000004441	-	92	37.079	Gallus_gallus
ENSPMGG00000017735	cpsf4	100	79.835	ENSGALG00000004714	CPSF4	100	79.835	Gallus_gallus
ENSPMGG00000017735	cpsf4	100	78.030	ENSGAFG00000010580	cpsf4	100	78.030	Gambusia_affinis
ENSPMGG00000017735	cpsf4	100	80.709	ENSGACG00000007792	cpsf4	100	80.709	Gasterosteus_aculeatus
ENSPMGG00000017735	cpsf4	100	71.375	ENSGAGG00000021835	CPSF4	100	73.606	Gopherus_agassizii
ENSPMGG00000017735	cpsf4	76	69.231	ENSGAGG00000020579	-	100	69.231	Gopherus_agassizii
ENSPMGG00000017735	cpsf4	100	71.747	ENSGGOG00000015131	CPSF4	100	72.862	Gorilla_gorilla
ENSPMGG00000017735	cpsf4	100	80.377	ENSHBUG00000013699	cpsf4	100	80.377	Haplochromis_burtoni
ENSPMGG00000017735	cpsf4	100	71.062	ENSHGLG00000017150	CPSF4	100	73.063	Heterocephalus_glaber_female
ENSPMGG00000017735	cpsf4	81	73.059	ENSHGLG00100009215	-	94	75.342	Heterocephalus_glaber_male
ENSPMGG00000017735	cpsf4	100	51.681	ENSHGLG00100017302	-	100	52.521	Heterocephalus_glaber_male
ENSPMGG00000017735	cpsf4	100	77.736	ENSHCOG00000004397	cpsf4	100	77.736	Hippocampus_comes
ENSPMGG00000017735	cpsf4	100	73.432	ENSIPUG00000017147	cpsf4	100	73.063	Ictalurus_punctatus
ENSPMGG00000017735	cpsf4	100	77.959	ENSSTOG00000001688	CPSF4	100	81.481	Ictidomys_tridecemlineatus
ENSPMGG00000017735	cpsf4	100	71.587	ENSJJAG00000019426	Cpsf4	100	72.862	Jaculus_jaculus
ENSPMGG00000017735	cpsf4	100	77.358	ENSKMAG00000015642	cpsf4	100	77.358	Kryptolebias_marmoratus
ENSPMGG00000017735	cpsf4	100	60.000	ENSLACG00000018470	-	100	60.000	Latimeria_chalumnae
ENSPMGG00000017735	cpsf4	100	73.801	ENSLACG00000010938	CPSF4	100	73.801	Latimeria_chalumnae
ENSPMGG00000017735	cpsf4	100	72.862	ENSLOCG00000004814	cpsf4	100	73.606	Lepisosteus_oculatus
ENSPMGG00000017735	cpsf4	100	71.956	ENSLAFG00000000159	CPSF4	100	73.234	Loxodonta_africana
ENSPMGG00000017735	cpsf4	100	76.987	ENSMFAG00000001462	CPSF4	100	85.864	Macaca_fascicularis
ENSPMGG00000017735	cpsf4	100	71.747	ENSMMUG00000019191	CPSF4	100	72.862	Macaca_mulatta
ENSPMGG00000017735	cpsf4	100	76.987	ENSMNEG00000032306	CPSF4	100	76.987	Macaca_nemestrina
ENSPMGG00000017735	cpsf4	100	76.569	ENSMLEG00000034721	CPSF4	100	76.569	Mandrillus_leucophaeus
ENSPMGG00000017735	cpsf4	100	79.323	ENSMAMG00000006244	cpsf4	100	79.323	Mastacembelus_armatus
ENSPMGG00000017735	cpsf4	100	80.377	ENSMZEG00005007515	cpsf4	100	80.377	Maylandia_zebra
ENSPMGG00000017735	cpsf4	81	85.417	ENSMGAG00000004235	CPSF4	92	85.417	Meleagris_gallopavo
ENSPMGG00000017735	cpsf4	100	71.587	ENSMAUG00000021253	Cpsf4	100	72.862	Mesocricetus_auratus
ENSPMGG00000017735	cpsf4	100	71.747	ENSMICG00000017429	CPSF4	100	72.862	Microcebus_murinus
ENSPMGG00000017735	cpsf4	100	71.587	ENSMOCG00000014901	Cpsf4	100	72.862	Microtus_ochrogaster
ENSPMGG00000017735	cpsf4	100	79.323	ENSMMOG00000001813	cpsf4	95	93.082	Mola_mola
ENSPMGG00000017735	cpsf4	100	72.119	ENSMODG00000001367	CPSF4	100	73.978	Monodelphis_domestica
ENSPMGG00000017735	cpsf4	100	79.845	ENSMALG00000012611	cpsf4	100	79.845	Monopterus_albus
ENSPMGG00000017735	cpsf4	100	78.862	MGP_CAROLIEiJ_G0028012	Cpsf4	100	81.481	Mus_caroli
ENSPMGG00000017735	cpsf4	100	78.862	ENSMUSG00000029625	Cpsf4	100	81.481	Mus_musculus
ENSPMGG00000017735	cpsf4	100	78.862	MGP_PahariEiJ_G0024581	Cpsf4	100	81.481	Mus_pahari
ENSPMGG00000017735	cpsf4	100	78.862	MGP_SPRETEiJ_G0029013	Cpsf4	100	81.148	Mus_spretus
ENSPMGG00000017735	cpsf4	100	71.587	ENSMPUG00000016508	CPSF4	100	72.862	Mustela_putorius_furo
ENSPMGG00000017735	cpsf4	81	82.990	ENSMLUG00000010980	CPSF4	92	86.082	Myotis_lucifugus
ENSPMGG00000017735	cpsf4	100	71.587	ENSNGAG00000001567	Cpsf4	100	72.862	Nannospalax_galili
ENSPMGG00000017735	cpsf4	92	76.829	ENSNBRG00000003943	cpsf4	99	76.829	Neolamprologus_brichardi
ENSPMGG00000017735	cpsf4	100	78.862	ENSNLEG00000011074	CPSF4	100	80.328	Nomascus_leucogenys
ENSPMGG00000017735	cpsf4	100	72.119	ENSMEUG00000006955	CPSF4	100	73.978	Notamacropus_eugenii
ENSPMGG00000017735	cpsf4	100	71.218	ENSOPRG00000013663	CPSF4	100	72.491	Ochotona_princeps
ENSPMGG00000017735	cpsf4	100	71.587	ENSODEG00000011181	-	100	72.862	Octodon_degus
ENSPMGG00000017735	cpsf4	100	62.948	ENSODEG00000009779	-	100	63.347	Octodon_degus
ENSPMGG00000017735	cpsf4	98	72.650	ENSODEG00000018283	-	91	74.138	Octodon_degus
ENSPMGG00000017735	cpsf4	100	80.755	ENSONIG00000008495	cpsf4	100	80.755	Oreochromis_niloticus
ENSPMGG00000017735	cpsf4	81	76.498	ENSOANG00000007729	CPSF4	93	76.498	Ornithorhynchus_anatinus
ENSPMGG00000017735	cpsf4	100	51.471	ENSOANG00000009568	-	100	51.471	Ornithorhynchus_anatinus
ENSPMGG00000017735	cpsf4	100	71.956	ENSOCUG00000002437	CPSF4	70	73.234	Oryctolagus_cuniculus
ENSPMGG00000017735	cpsf4	100	79.245	ENSORLG00000022798	cpsf4	100	79.245	Oryzias_latipes
ENSPMGG00000017735	cpsf4	100	79.245	ENSORLG00020008548	cpsf4	100	79.245	Oryzias_latipes_hni
ENSPMGG00000017735	cpsf4	100	78.868	ENSORLG00015019575	cpsf4	100	78.868	Oryzias_latipes_hsok
ENSPMGG00000017735	cpsf4	100	78.868	ENSOMEG00000005176	cpsf4	100	78.868	Oryzias_melastigma
ENSPMGG00000017735	cpsf4	100	71.587	ENSOGAG00000010884	CPSF4	100	72.862	Otolemur_garnettii
ENSPMGG00000017735	cpsf4	100	63.121	ENSOARG00000018668	CPSF4	100	63.121	Ovis_aries
ENSPMGG00000017735	cpsf4	100	71.747	ENSPPAG00000043355	CPSF4	100	73.978	Pan_paniscus
ENSPMGG00000017735	cpsf4	100	71.587	ENSPPRG00000003134	CPSF4	100	72.862	Panthera_pardus
ENSPMGG00000017735	cpsf4	88	70.661	ENSPTIG00000005604	CPSF4	90	71.488	Panthera_tigris_altaica
ENSPMGG00000017735	cpsf4	100	71.747	ENSPTRG00000019453	CPSF4	100	73.978	Pan_troglodytes
ENSPMGG00000017735	cpsf4	100	76.987	ENSPANG00000023123	CPSF4	100	76.987	Papio_anubis
ENSPMGG00000017735	cpsf4	100	72.263	ENSPKIG00000014278	cpsf4	100	72.263	Paramormyrops_kingsleyae
ENSPMGG00000017735	cpsf4	81	65.104	ENSPSIG00000018198	-	100	65.104	Pelodiscus_sinensis
ENSPMGG00000017735	cpsf4	80	73.611	ENSPSIG00000011229	CPSF4	100	76.389	Pelodiscus_sinensis
ENSPMGG00000017735	cpsf4	100	71.587	ENSPEMG00000004508	Cpsf4	100	72.862	Peromyscus_maniculatus_bairdii
ENSPMGG00000017735	cpsf4	100	72.119	ENSPCIG00000024776	CPSF4	100	73.978	Phascolarctos_cinereus
ENSPMGG00000017735	cpsf4	100	78.030	ENSPFOG00000014912	cpsf4	100	78.030	Poecilia_formosa
ENSPMGG00000017735	cpsf4	100	77.823	ENSPLAG00000009599	cpsf4	100	77.823	Poecilia_latipinna
ENSPMGG00000017735	cpsf4	100	78.030	ENSPMEG00000009790	cpsf4	100	78.030	Poecilia_mexicana
ENSPMGG00000017735	cpsf4	100	77.652	ENSPREG00000018166	cpsf4	100	77.652	Poecilia_reticulata
ENSPMGG00000017735	cpsf4	81	74.312	ENSPPYG00000017378	CPSF4	93	77.064	Pongo_abelii
ENSPMGG00000017735	cpsf4	100	72.325	ENSPCAG00000001892	CPSF4	100	73.606	Procavia_capensis
ENSPMGG00000017735	cpsf4	100	73.946	ENSPCOG00000012771	CPSF4	100	75.096	Propithecus_coquereli
ENSPMGG00000017735	cpsf4	100	71.004	ENSPVAG00000007531	CPSF4	100	72.119	Pteropus_vampyrus
ENSPMGG00000017735	cpsf4	100	80.377	ENSPNYG00000018559	cpsf4	100	80.377	Pundamilia_nyererei
ENSPMGG00000017735	cpsf4	100	74.815	ENSPNAG00000003736	cpsf4	100	75.556	Pygocentrus_nattereri
ENSPMGG00000017735	cpsf4	100	77.959	ENSRNOG00000000985	Cpsf4	100	81.481	Rattus_norvegicus
ENSPMGG00000017735	cpsf4	81	74.771	ENSRBIG00000033886	CPSF4	93	76.147	Rhinopithecus_bieti
ENSPMGG00000017735	cpsf4	100	78.862	ENSRROG00000040431	CPSF4	100	80.328	Rhinopithecus_roxellana
ENSPMGG00000017735	cpsf4	100	71.747	ENSSBOG00000020493	CPSF4	100	85.864	Saimiri_boliviensis_boliviensis
ENSPMGG00000017735	cpsf4	100	72.119	ENSSHAG00000011533	CPSF4	100	73.978	Sarcophilus_harrisii
ENSPMGG00000017735	cpsf4	100	72.101	ENSSFOG00015007883	cpsf4	100	72.101	Scleropages_formosus
ENSPMGG00000017735	cpsf4	100	83.197	ENSSMAG00000006374	cpsf4	100	83.197	Scophthalmus_maximus
ENSPMGG00000017735	cpsf4	100	80.451	ENSSDUG00000018887	cpsf4	100	80.451	Seriola_dumerili
ENSPMGG00000017735	cpsf4	100	80.827	ENSSLDG00000019078	cpsf4	100	80.827	Seriola_lalandi_dorsalis
ENSPMGG00000017735	cpsf4	81	74.771	ENSSARG00000012416	CPSF4	93	76.147	Sorex_araneus
ENSPMGG00000017735	cpsf4	95	58.590	ENSSPUG00000014803	-	97	58.590	Sphenodon_punctatus
ENSPMGG00000017735	cpsf4	100	73.606	ENSSPUG00000003549	CPSF4	100	73.606	Sphenodon_punctatus
ENSPMGG00000017735	cpsf4	100	87.500	ENSSPAG00000006174	cpsf4	100	87.500	Stegastes_partitus
ENSPMGG00000017735	cpsf4	100	78.862	ENSSSCG00000026896	CPSF4	100	81.148	Sus_scrofa
ENSPMGG00000017735	cpsf4	100	77.959	ENSTGUG00000007552	CPSF4	100	77.959	Taeniopygia_guttata
ENSPMGG00000017735	cpsf4	100	76.806	ENSTRUG00000024220	cpsf4	100	76.806	Takifugu_rubripes
ENSPMGG00000017735	cpsf4	100	77.186	ENSTNIG00000006265	cpsf4	100	77.567	Tetraodon_nigroviridis
ENSPMGG00000017735	cpsf4	81	67.431	ENSTBEG00000011406	CPSF4	93	66.972	Tupaia_belangeri
ENSPMGG00000017735	cpsf4	83	95.455	ENSTTRG00000003007	CPSF4	68	86.413	Tursiops_truncatus
ENSPMGG00000017735	cpsf4	90	76.233	ENSUAMG00000008051	CPSF4	85	80.090	Ursus_americanus
ENSPMGG00000017735	cpsf4	100	77.959	ENSUMAG00000009474	CPSF4	100	81.481	Ursus_maritimus
ENSPMGG00000017735	cpsf4	100	78.455	ENSVVUG00000008824	CPSF4	100	80.738	Vulpes_vulpes
ENSPMGG00000017735	cpsf4	99	54.511	ENSXETG00000004641	cpsf4l	99	54.511	Xenopus_tropicalis
ENSPMGG00000017735	cpsf4	100	67.616	ENSXETG00000009892	cpsf4	100	69.892	Xenopus_tropicalis
ENSPMGG00000017735	cpsf4	100	78.030	ENSXCOG00000016040	cpsf4	100	78.030	Xiphophorus_couchianus
ENSPMGG00000017735	cpsf4	100	78.030	ENSXMAG00000024670	cpsf4	100	78.030	Xiphophorus_maculatus