EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000018509 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apb
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1b
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 3079 bases
Position: chrKN464072.1:834147-837225
Accession: ZDB-GENE-040426-2386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000022876	RRM_1	PF00076.22	7.1e-33	1	2
ENSPMGP00000022876	RRM_1	PF00076.22	7.1e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000024368	-	870	-	ENSPMGP00000022876	289 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000018509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000018509's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000018509	trnau1apb	62	93.258	ENSAPOG00000010086	trnau1apb	99	70.408	Acanthochromis_polyacanthus
ENSPMGG00000018509	trnau1apb	99	66.467	ENSACIG00000001863	trnau1apb	99	66.766	Amphilophus_citrinellus
ENSPMGG00000018509	trnau1apb	97	79.167	ENSAOCG00000011891	trnau1apb	79	78.333	Amphiprion_ocellaris
ENSPMGG00000018509	trnau1apb	95	79.574	ENSAPEG00000008029	trnau1apb	99	70.470	Amphiprion_percula
ENSPMGG00000018509	trnau1apb	96	79.070	ENSATEG00000002196	trnau1apb	79	79.070	Anabas_testudineus
ENSPMGG00000018509	trnau1apb	99	65.698	ENSACLG00000003016	trnau1apb	99	66.176	Astatotilapia_calliptera
ENSPMGG00000018509	trnau1apb	98	59.933	ENSAMXG00000001805	trnau1apb	98	59.933	Astyanax_mexicanus
ENSPMGG00000018509	trnau1apb	93	80.083	ENSCSEG00000018215	trnau1apb	77	78.423	Cynoglossus_semilaevis
ENSPMGG00000018509	trnau1apb	91	77.130	ENSCVAG00000017866	trnau1apb	77	75.785	Cyprinodon_variegatus
ENSPMGG00000018509	trnau1apb	98	58.917	ENSDARG00000056475	trnau1apb	97	60.714	Danio_rerio
ENSPMGG00000018509	trnau1apb	96	77.731	ENSFHEG00000001267	trnau1apb	77	76.744	Fundulus_heteroclitus
ENSPMGG00000018509	trnau1apb	93	75.417	ENSGMOG00000001160	trnau1apb	99	58.788	Gadus_morhua
ENSPMGG00000018509	trnau1apb	62	91.620	ENSGAFG00000006770	trnau1apb	99	66.885	Gambusia_affinis
ENSPMGG00000018509	trnau1apb	99	64.638	ENSGACG00000014944	trnau1apb	81	78.333	Gasterosteus_aculeatus
ENSPMGG00000018509	trnau1apb	67	39.151	ENSGAGG00000022384	-	78	38.571	Gopherus_agassizii
ENSPMGG00000018509	trnau1apb	99	72.937	ENSHBUG00000018944	trnau1apb	99	72.277	Haplochromis_burtoni
ENSPMGG00000018509	trnau1apb	81	75.630	ENSHCOG00000011350	trnau1apb	71	75.210	Hippocampus_comes
ENSPMGG00000018509	trnau1apb	75	81.720	ENSIPUG00000008843	tsp1l	99	58.013	Ictalurus_punctatus
ENSPMGG00000018509	trnau1apb	94	77.778	ENSKMAG00000010082	trnau1apb	78	76.987	Kryptolebias_marmoratus
ENSPMGG00000018509	trnau1apb	97	78.333	ENSLBEG00000020480	trnau1apb	81	77.500	Labrus_bergylta
ENSPMGG00000018509	trnau1apb	99	52.443	ENSLOCG00000013175	trnau1apb	99	52.443	Lepisosteus_oculatus
ENSPMGG00000018509	trnau1apb	97	79.498	ENSMAMG00000012192	trnau1apb	79	78.661	Mastacembelus_armatus
ENSPMGG00000018509	trnau1apb	99	62.315	ENSMZEG00005014852	trnau1apb	99	62.908	Maylandia_zebra
ENSPMGG00000018509	trnau1apb	67	37.561	ENSMGAG00000003234	-	99	40.609	Meleagris_gallopavo
ENSPMGG00000018509	trnau1apb	97	54.867	ENSMMOG00000021521	trnau1apb	78	82.759	Mola_mola
ENSPMGG00000018509	trnau1apb	99	69.868	ENSMALG00000003772	trnau1apb	99	69.868	Monopterus_albus
ENSPMGG00000018509	trnau1apb	97	65.964	ENSNBRG00000000751	trnau1apb	99	65.964	Neolamprologus_brichardi
ENSPMGG00000018509	trnau1apb	99	72.168	ENSONIG00000016639	trnau1apb	99	71.521	Oreochromis_niloticus
ENSPMGG00000018509	trnau1apb	88	82.243	ENSORLG00000013265	trnau1apb	70	82.243	Oryzias_latipes
ENSPMGG00000018509	trnau1apb	88	82.243	ENSORLG00020004464	trnau1apb	70	82.243	Oryzias_latipes_hni
ENSPMGG00000018509	trnau1apb	88	82.243	ENSORLG00015021098	trnau1apb	70	82.243	Oryzias_latipes_hsok
ENSPMGG00000018509	trnau1apb	88	81.776	ENSOMEG00000016531	trnau1apb	77	77.500	Oryzias_melastigma
ENSPMGG00000018509	trnau1apb	61	79.888	ENSPKIG00000007995	trnau1apb	98	60.345	Paramormyrops_kingsleyae
ENSPMGG00000018509	trnau1apb	67	39.423	ENSPSIG00000004189	-	78	39.423	Pelodiscus_sinensis
ENSPMGG00000018509	trnau1apb	97	77.824	ENSPFOG00000003938	trnau1apb	99	64.955	Poecilia_formosa
ENSPMGG00000018509	trnau1apb	97	77.824	ENSPLAG00000015480	trnau1apb	78	75.732	Poecilia_latipinna
ENSPMGG00000018509	trnau1apb	97	77.824	ENSPMEG00000012743	trnau1apb	78	75.732	Poecilia_mexicana
ENSPMGG00000018509	trnau1apb	97	76.987	ENSPREG00000015035	trnau1apb	78	74.895	Poecilia_reticulata
ENSPMGG00000018509	trnau1apb	99	63.824	ENSPNYG00000012127	trnau1apb	99	63.529	Pundamilia_nyererei
ENSPMGG00000018509	trnau1apb	73	84.916	ENSPNAG00000019138	trnau1apb	98	59.936	Pygocentrus_nattereri
ENSPMGG00000018509	trnau1apb	76	82.123	ENSSFOG00015014158	trnau1apb	99	57.143	Scleropages_formosus
ENSPMGG00000018509	trnau1apb	97	79.167	ENSSMAG00000001745	trnau1apb	99	62.393	Scophthalmus_maximus
ENSPMGG00000018509	trnau1apb	88	82.160	ENSSDUG00000011109	trnau1apb	99	62.722	Seriola_dumerili
ENSPMGG00000018509	trnau1apb	88	82.160	ENSSLDG00000012947	trnau1apb	99	63.905	Seriola_lalandi_dorsalis
ENSPMGG00000018509	trnau1apb	99	70.093	ENSSPAG00000006917	trnau1apb	99	68.536	Stegastes_partitus
ENSPMGG00000018509	trnau1apb	98	76.250	ENSTRUG00000008608	trnau1apb	99	67.687	Takifugu_rubripes
ENSPMGG00000018509	trnau1apb	99	67.524	ENSTNIG00000000916	trnau1apb	99	66.129	Tetraodon_nigroviridis
ENSPMGG00000018509	trnau1apb	93	66.429	ENSXCOG00000007974	trnau1apb	94	63.390	Xiphophorus_couchianus
ENSPMGG00000018509	trnau1apb	97	78.243	ENSXMAG00000029918	trnau1apb	78	76.987	Xiphophorus_maculatus