EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000018540 (Gene tree)
Gene ID: -
Gene Symbol: rbm47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 3183 bases
Position: chrKN460658.1:123232-126414
Accession: ZDB-GENE-030131-9612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000022908	RRM_1	PF00076.22	3.3e-39	1	3
ENSPMGP00000022908	RRM_1	PF00076.22	3.3e-39	2	3
ENSPMGP00000022908	RRM_1	PF00076.22	3.3e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000024405	-	1761	-	ENSPMGP00000022908	586 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000018540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000018540's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000018540	rbm47	100	74.415	ENSG00000163694	RBM47	100	84.793	Homo_sapiens
ENSPMGG00000018540	rbm47	100	89.882	ENSAPOG00000011062	rbm47	100	90.388	Acanthochromis_polyacanthus
ENSPMGG00000018540	rbm47	100	73.211	ENSAMEG00000009672	RBM47	100	74.875	Ailuropoda_melanoleuca
ENSPMGG00000018540	rbm47	100	91.171	ENSACIG00000011531	rbm47	100	91.171	Amphilophus_citrinellus
ENSPMGG00000018540	rbm47	100	92.034	ENSAOCG00000022245	rbm47	100	91.864	Amphiprion_ocellaris
ENSPMGG00000018540	rbm47	100	92.190	ENSAPEG00000018304	rbm47	100	92.020	Amphiprion_percula
ENSPMGG00000018540	rbm47	100	89.421	ENSATEG00000018400	rbm47	94	93.310	Anabas_testudineus
ENSPMGG00000018540	rbm47	100	75.000	ENSAPLG00000013974	RBM47	100	74.247	Anas_platyrhynchos
ENSPMGG00000018540	rbm47	100	74.709	ENSACAG00000011833	RBM47	96	76.562	Anolis_carolinensis
ENSPMGG00000018540	rbm47	100	82.181	ENSANAG00000029440	RBM47	95	83.422	Aotus_nancymaae
ENSPMGG00000018540	rbm47	100	87.993	ENSACLG00000016902	rbm47	94	91.274	Astatotilapia_calliptera
ENSPMGG00000018540	rbm47	100	81.250	ENSAMXG00000021794	rbm47	95	82.609	Astyanax_mexicanus
ENSPMGG00000018540	rbm47	100	75.336	ENSBTAG00000002356	RBM47	100	75.839	Bos_taurus
ENSPMGG00000018540	rbm47	100	81.915	ENSCJAG00000019385	RBM47	95	83.690	Callithrix_jacchus
ENSPMGG00000018540	rbm47	97	74.695	ENSCAFG00000015898	RBM47	96	76.614	Canis_familiaris
ENSPMGG00000018540	rbm47	82	76.939	ENSCAFG00020010558	RBM47	89	85.795	Canis_lupus_dingo
ENSPMGG00000018540	rbm47	100	75.336	ENSCHIG00000026214	RBM47	100	75.839	Capra_hircus
ENSPMGG00000018540	rbm47	86	65.430	ENSTSYG00000033612	RBM47	93	64.648	Carlito_syrichta
ENSPMGG00000018540	rbm47	100	71.597	ENSCAPG00000008426	RBM47	100	71.429	Cavia_aperea
ENSPMGG00000018540	rbm47	100	82.228	ENSCPOG00000014100	RBM47	100	76.846	Cavia_porcellus
ENSPMGG00000018540	rbm47	100	83.957	ENSCCAG00000030129	-	95	83.422	Cebus_capucinus
ENSPMGG00000018540	rbm47	99	55.312	ENSCCAG00000024397	-	99	53.963	Cebus_capucinus
ENSPMGG00000018540	rbm47	100	75.169	ENSCATG00000042064	RBM47	95	83.422	Cercocebus_atys
ENSPMGG00000018540	rbm47	100	81.746	ENSCLAG00000001684	RBM47	100	81.013	Chinchilla_lanigera
ENSPMGG00000018540	rbm47	100	74.415	ENSCSAG00000017060	RBM47	100	75.251	Chlorocebus_sabaeus
ENSPMGG00000018540	rbm47	89	74.324	ENSCHOG00000011731	RBM47	88	76.180	Choloepus_hoffmanni
ENSPMGG00000018540	rbm47	100	77.667	ENSCPBG00000013831	RBM47	100	76.756	Chrysemys_picta_bellii
ENSPMGG00000018540	rbm47	100	81.383	ENSCANG00000019997	RBM47	95	83.422	Colobus_angolensis_palliatus
ENSPMGG00000018540	rbm47	100	76.923	ENSCGRG00001020102	-	100	78.249	Cricetulus_griseus_chok1gshd
ENSPMGG00000018540	rbm47	100	81.915	ENSCGRG00001000623	-	100	74.376	Cricetulus_griseus_chok1gshd
ENSPMGG00000018540	rbm47	100	76.658	ENSCGRG00000014760	-	96	80.899	Cricetulus_griseus_crigri
ENSPMGG00000018540	rbm47	100	73.544	ENSCGRG00000007762	-	100	81.013	Cricetulus_griseus_crigri
ENSPMGG00000018540	rbm47	100	89.153	ENSCSEG00000004545	rbm47	100	89.153	Cynoglossus_semilaevis
ENSPMGG00000018540	rbm47	99	92.857	ENSCVAG00000020144	rbm47	100	90.136	Cyprinodon_variegatus
ENSPMGG00000018540	rbm47	100	81.353	ENSDARG00000061985	rbm47	95	83.421	Danio_rerio
ENSPMGG00000018540	rbm47	100	75.379	ENSDNOG00000046854	RBM47	100	76.391	Dasypus_novemcinctus
ENSPMGG00000018540	rbm47	100	74.917	ENSDORG00000010144	Rbm47	100	74.917	Dipodomys_ordii
ENSPMGG00000018540	rbm47	100	74.958	ENSETEG00000009194	RBM47	100	75.626	Echinops_telfairi
ENSPMGG00000018540	rbm47	99	58.961	ENSEBUG00000011912	rbm47	95	60.984	Eptatretus_burgeri
ENSPMGG00000018540	rbm47	100	74.832	ENSEASG00005008443	RBM47	100	76.174	Equus_asinus_asinus
ENSPMGG00000018540	rbm47	100	74.832	ENSECAG00000004400	RBM47	100	76.174	Equus_caballus
ENSPMGG00000018540	rbm47	75	83.117	ENSEEUG00000001194	RBM47	75	85.281	Erinaceus_europaeus
ENSPMGG00000018540	rbm47	100	80.130	ENSELUG00000006148	rbm47	93	91.341	Esox_lucius
ENSPMGG00000018540	rbm47	100	74.916	ENSFCAG00000012399	RBM47	100	76.599	Felis_catus
ENSPMGG00000018540	rbm47	100	76.000	ENSFALG00000002861	RBM47	100	77.090	Ficedula_albicollis
ENSPMGG00000018540	rbm47	100	76.263	ENSFDAG00000016326	RBM47	100	76.094	Fukomys_damarensis
ENSPMGG00000018540	rbm47	100	89.438	ENSFHEG00000007938	rbm47	100	89.438	Fundulus_heteroclitus
ENSPMGG00000018540	rbm47	100	81.230	ENSGMOG00000014802	rbm47	93	83.737	Gadus_morhua
ENSPMGG00000018540	rbm47	63	83.024	ENSGALG00000014267	RBM47	100	83.820	Gallus_gallus
ENSPMGG00000018540	rbm47	63	91.375	ENSGAFG00000020571	rbm47	98	91.375	Gambusia_affinis
ENSPMGG00000018540	rbm47	100	87.769	ENSGACG00000016223	rbm47	93	94.269	Gasterosteus_aculeatus
ENSPMGG00000018540	rbm47	100	77.333	ENSGAGG00000020051	RBM47	100	76.756	Gopherus_agassizii
ENSPMGG00000018540	rbm47	100	75.169	ENSGGOG00000001367	RBM47	95	83.422	Gorilla_gorilla
ENSPMGG00000018540	rbm47	100	87.705	ENSHBUG00000003520	rbm47	94	90.957	Haplochromis_burtoni
ENSPMGG00000018540	rbm47	84	64.000	ENSHGLG00000016914	RBM47	100	79.747	Heterocephalus_glaber_female
ENSPMGG00000018540	rbm47	100	82.667	ENSHGLG00100014028	-	100	79.747	Heterocephalus_glaber_male
ENSPMGG00000018540	rbm47	100	68.067	ENSHGLG00100003071	-	100	67.395	Heterocephalus_glaber_male
ENSPMGG00000018540	rbm47	99	90.832	ENSHCOG00000002074	rbm47	95	92.540	Hippocampus_comes
ENSPMGG00000018540	rbm47	100	83.022	ENSIPUG00000004743	rbm47	100	82.513	Ictalurus_punctatus
ENSPMGG00000018540	rbm47	100	74.457	ENSSTOG00000004727	RBM47	100	79.747	Ictidomys_tridecemlineatus
ENSPMGG00000018540	rbm47	100	74.086	ENSJJAG00000013823	Rbm47	100	74.419	Jaculus_jaculus
ENSPMGG00000018540	rbm47	100	88.758	ENSKMAG00000000084	rbm47	96	90.543	Kryptolebias_marmoratus
ENSPMGG00000018540	rbm47	100	91.356	ENSLBEG00000008436	rbm47	100	91.356	Labrus_bergylta
ENSPMGG00000018540	rbm47	100	76.768	ENSLACG00000007196	RBM47	100	76.936	Latimeria_chalumnae
ENSPMGG00000018540	rbm47	100	82.939	ENSLOCG00000012966	rbm47	95	81.895	Lepisosteus_oculatus
ENSPMGG00000018540	rbm47	100	76.610	ENSLAFG00000011998	RBM47	100	75.932	Loxodonta_africana
ENSPMGG00000018540	rbm47	100	75.169	ENSMFAG00000037967	RBM47	95	83.422	Macaca_fascicularis
ENSPMGG00000018540	rbm47	100	74.415	ENSMMUG00000012036	RBM47	100	82.902	Macaca_mulatta
ENSPMGG00000018540	rbm47	100	81.117	ENSMNEG00000040774	RBM47	95	83.155	Macaca_nemestrina
ENSPMGG00000018540	rbm47	100	82.857	ENSMLEG00000041432	RBM47	100	85.079	Mandrillus_leucophaeus
ENSPMGG00000018540	rbm47	100	88.889	ENSMAMG00000019143	rbm47	94	92.416	Mastacembelus_armatus
ENSPMGG00000018540	rbm47	100	87.993	ENSMZEG00005023659	rbm47	94	91.274	Maylandia_zebra
ENSPMGG00000018540	rbm47	100	76.246	ENSMGAG00000012226	RBM47	100	76.167	Meleagris_gallopavo
ENSPMGG00000018540	rbm47	100	82.228	ENSMAUG00000006493	Rbm47	100	81.646	Mesocricetus_auratus
ENSPMGG00000018540	rbm47	100	78.877	ENSMICG00000026417	RBM47	96	86.040	Microcebus_murinus
ENSPMGG00000018540	rbm47	100	81.915	ENSMOCG00000021170	Rbm47	100	80.380	Microtus_ochrogaster
ENSPMGG00000018540	rbm47	100	88.889	ENSMMOG00000007260	rbm47	94	91.916	Mola_mola
ENSPMGG00000018540	rbm47	100	76.667	ENSMODG00000007003	RBM47	100	75.920	Monodelphis_domestica
ENSPMGG00000018540	rbm47	100	71.332	ENSMODG00000020561	-	96	72.535	Monodelphis_domestica
ENSPMGG00000018540	rbm47	52	78.387	ENSMODG00000015426	-	96	78.571	Monodelphis_domestica
ENSPMGG00000018540	rbm47	100	91.993	ENSMALG00000005167	rbm47	100	91.993	Monopterus_albus
ENSPMGG00000018540	rbm47	100	82.181	MGP_CAROLIEiJ_G0027258	Rbm47	100	83.245	Mus_caroli
ENSPMGG00000018540	rbm47	100	82.181	ENSMUSG00000070780	Rbm47	100	83.245	Mus_musculus
ENSPMGG00000018540	rbm47	100	82.181	MGP_PahariEiJ_G0017040	Rbm47	100	83.245	Mus_pahari
ENSPMGG00000018540	rbm47	100	82.181	MGP_SPRETEiJ_G0028253	Rbm47	100	83.245	Mus_spretus
ENSPMGG00000018540	rbm47	100	73.913	ENSMPUG00000006177	RBM47	94	75.251	Mustela_putorius_furo
ENSPMGG00000018540	rbm47	100	75.503	ENSMLUG00000000889	RBM47	100	75.503	Myotis_lucifugus
ENSPMGG00000018540	rbm47	100	74.167	ENSNGAG00000003325	Rbm47	100	74.167	Nannospalax_galili
ENSPMGG00000018540	rbm47	100	88.342	ENSNBRG00000015092	rbm47	94	91.638	Neolamprologus_brichardi
ENSPMGG00000018540	rbm47	100	75.000	ENSNLEG00000017151	RBM47	95	83.422	Nomascus_leucogenys
ENSPMGG00000018540	rbm47	73	79.953	ENSMEUG00000009516	-	99	80.706	Notamacropus_eugenii
ENSPMGG00000018540	rbm47	75	85.417	ENSOPRG00000016507	-	71	85.417	Ochotona_princeps
ENSPMGG00000018540	rbm47	100	74.790	ENSODEG00000004873	RBM47	100	76.471	Octodon_degus
ENSPMGG00000018540	rbm47	100	87.500	ENSONIG00000009061	rbm47	94	91.404	Oreochromis_niloticus
ENSPMGG00000018540	rbm47	100	75.874	ENSOANG00000008978	RBM47	96	78.497	Ornithorhynchus_anatinus
ENSPMGG00000018540	rbm47	100	75.084	ENSOCUG00000012034	RBM47	100	75.503	Oryctolagus_cuniculus
ENSPMGG00000018540	rbm47	100	89.983	ENSORLG00000005847	rbm47	100	89.983	Oryzias_latipes
ENSPMGG00000018540	rbm47	100	90.153	ENSORLG00020005154	rbm47	100	90.153	Oryzias_latipes_hni
ENSPMGG00000018540	rbm47	100	89.813	ENSORLG00015000066	rbm47	100	89.813	Oryzias_latipes_hsok
ENSPMGG00000018540	rbm47	100	89.796	ENSOMEG00000010730	rbm47	100	89.796	Oryzias_melastigma
ENSPMGG00000018540	rbm47	100	69.580	ENSOGAG00000025193	-	100	71.092	Otolemur_garnettii
ENSPMGG00000018540	rbm47	100	74.080	ENSOGAG00000029367	-	100	75.251	Otolemur_garnettii
ENSPMGG00000018540	rbm47	100	67.450	ENSOARG00000012711	RBM47	100	67.953	Ovis_aries
ENSPMGG00000018540	rbm47	100	75.169	ENSPPAG00000029763	RBM47	95	83.422	Pan_paniscus
ENSPMGG00000018540	rbm47	100	81.003	ENSPPRG00000012873	RBM47	100	83.467	Panthera_pardus
ENSPMGG00000018540	rbm47	85	75.547	ENSPTIG00000017046	RBM47	100	75.149	Panthera_tigris_altaica
ENSPMGG00000018540	rbm47	100	75.169	ENSPTRG00000016006	RBM47	95	83.422	Pan_troglodytes
ENSPMGG00000018540	rbm47	100	75.169	ENSPANG00000005980	RBM47	95	83.422	Papio_anubis
ENSPMGG00000018540	rbm47	97	80.560	ENSPKIG00000005037	rbm47	95	79.685	Paramormyrops_kingsleyae
ENSPMGG00000018540	rbm47	100	76.311	ENSPKIG00000013431	RBM47	100	75.804	Paramormyrops_kingsleyae
ENSPMGG00000018540	rbm47	89	79.661	ENSPSIG00000017516	RBM47	97	78.639	Pelodiscus_sinensis
ENSPMGG00000018540	rbm47	100	81.915	ENSPEMG00000011088	Rbm47	100	74.833	Peromyscus_maniculatus_bairdii
ENSPMGG00000018540	rbm47	97	90.227	ENSPFOG00000007997	rbm47	94	90.227	Poecilia_formosa
ENSPMGG00000018540	rbm47	97	90.210	ENSPLAG00000002072	rbm47	94	90.210	Poecilia_latipinna
ENSPMGG00000018540	rbm47	100	88.533	ENSPMEG00000017492	rbm47	100	88.533	Poecilia_mexicana
ENSPMGG00000018540	rbm47	97	90.210	ENSPREG00000008456	rbm47	100	91.081	Poecilia_reticulata
ENSPMGG00000018540	rbm47	99	66.554	ENSPPYG00000014688	RBM47	98	67.244	Pongo_abelii
ENSPMGG00000018540	rbm47	81	81.454	ENSPCAG00000011879	RBM47	81	83.208	Procavia_capensis
ENSPMGG00000018540	rbm47	100	73.862	ENSPCOG00000023451	RBM47	100	82.353	Propithecus_coquereli
ENSPMGG00000018540	rbm47	100	73.957	ENSPVAG00000003812	RBM47	100	74.624	Pteropus_vampyrus
ENSPMGG00000018540	rbm47	100	87.561	ENSPNYG00000022868	rbm47	94	90.799	Pundamilia_nyererei
ENSPMGG00000018540	rbm47	100	80.921	ENSPNAG00000007940	rbm47	94	83.595	Pygocentrus_nattereri
ENSPMGG00000018540	rbm47	100	74.415	ENSRNOG00000002408	Rbm47	100	75.418	Rattus_norvegicus
ENSPMGG00000018540	rbm47	100	81.383	ENSRBIG00000039601	RBM47	95	83.422	Rhinopithecus_bieti
ENSPMGG00000018540	rbm47	100	81.383	ENSRROG00000044696	RBM47	95	83.422	Rhinopithecus_roxellana
ENSPMGG00000018540	rbm47	100	74.112	ENSSBOG00000028475	RBM47	100	79.752	Saimiri_boliviensis_boliviensis
ENSPMGG00000018540	rbm47	100	76.717	ENSSHAG00000017576	RBM47	100	75.966	Sarcophilus_harrisii
ENSPMGG00000018540	rbm47	99	79.831	ENSSFOG00015024101	RBM47	96	80.279	Scleropages_formosus
ENSPMGG00000018540	rbm47	100	78.275	ENSSFOG00015012445	rbm47	94	79.860	Scleropages_formosus
ENSPMGG00000018540	rbm47	100	88.245	ENSSMAG00000009744	rbm47	94	91.887	Scophthalmus_maximus
ENSPMGG00000018540	rbm47	100	91.878	ENSSDUG00000022684	rbm47	96	93.838	Seriola_dumerili
ENSPMGG00000018540	rbm47	100	92.687	ENSSLDG00000003109	rbm47	100	92.687	Seriola_lalandi_dorsalis
ENSPMGG00000018540	rbm47	85	79.287	ENSSARG00000001735	RBM47	75	81.514	Sorex_araneus
ENSPMGG00000018540	rbm47	100	82.804	ENSSPUG00000007515	RBM47	100	75.885	Sphenodon_punctatus
ENSPMGG00000018540	rbm47	100	93.367	ENSSPAG00000001257	rbm47	100	93.367	Stegastes_partitus
ENSPMGG00000018540	rbm47	100	80.952	ENSSSCG00000008796	RBM47	100	75.671	Sus_scrofa
ENSPMGG00000018540	rbm47	100	75.960	ENSTGUG00000008705	RBM47	100	77.219	Taeniopygia_guttata
ENSPMGG00000018540	rbm47	100	89.249	ENSTRUG00000014050	rbm47	100	89.249	Takifugu_rubripes
ENSPMGG00000018540	rbm47	100	88.040	ENSTNIG00000006127	rbm47	94	91.197	Tetraodon_nigroviridis
ENSPMGG00000018540	rbm47	77	80.749	ENSTBEG00000001607	RBM47	76	81.551	Tupaia_belangeri
ENSPMGG00000018540	rbm47	100	75.589	ENSTTRG00000002839	RBM47	100	75.758	Tursiops_truncatus
ENSPMGG00000018540	rbm47	100	74.749	ENSUAMG00000021346	RBM47	100	75.084	Ursus_americanus
ENSPMGG00000018540	rbm47	57	76.027	ENSVPAG00000000641	-	56	79.310	Vicugna_pacos
ENSPMGG00000018540	rbm47	97	76.573	ENSVVUG00000014774	RBM47	96	77.273	Vulpes_vulpes
ENSPMGG00000018540	rbm47	100	76.254	ENSXETG00000012802	rbm47	100	74.916	Xenopus_tropicalis
ENSPMGG00000018540	rbm47	88	91.622	ENSXCOG00000000780	rbm47	100	91.622	Xiphophorus_couchianus
ENSPMGG00000018540	rbm47	100	89.322	ENSXMAG00000009874	rbm47	100	89.322	Xiphophorus_maculatus