EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000018553 (Gene tree)
Gene ID: -
Gene Symbol: stau1
Alias: -
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 4442 bases
Position: chrKN467085.1:628226-632667
Accession: ZDB-GENE-030131-6372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000022929	dsrm	PF00035.26	1.7e-45	1	4
ENSPMGP00000022929	dsrm	PF00035.26	1.7e-45	2	4
ENSPMGP00000022929	dsrm	PF00035.26	1.7e-45	3	4
ENSPMGP00000022929	dsrm	PF00035.26	1.7e-45	4	4
ENSPMGP00000022932	dsrm	PF00035.26	1.7e-34	1	3
ENSPMGP00000022932	dsrm	PF00035.26	1.7e-34	2	3
ENSPMGP00000022932	dsrm	PF00035.26	1.7e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000024429	-	1383	-	ENSPMGP00000022932	460 (aa)	-	-
ENSPMGT00000024426	-	2061	-	ENSPMGP00000022929	686 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000018553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000018553's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000018553	stau1	99	72.470	ENSG00000124214	STAU1	99	75.150	Homo_sapiens
ENSPMGG00000018553	stau1	100	85.940	ENSAPOG00000017260	stau1	99	86.063	Acanthochromis_polyacanthus
ENSPMGG00000018553	stau1	99	72.065	ENSAMEG00000013681	STAU1	99	68.414	Ailuropoda_melanoleuca
ENSPMGG00000018553	stau1	100	84.146	ENSACIG00000015918	stau1	100	85.180	Amphilophus_citrinellus
ENSPMGG00000018553	stau1	100	86.944	ENSAOCG00000012224	stau1	99	87.069	Amphiprion_ocellaris
ENSPMGG00000018553	stau1	100	87.231	ENSAPEG00000012308	stau1	99	87.356	Amphiprion_percula
ENSPMGG00000018553	stau1	100	86.533	ENSATEG00000024600	stau1	100	86.533	Anabas_testudineus
ENSPMGG00000018553	stau1	99	74.000	ENSAPLG00000010527	STAU1	100	71.627	Anas_platyrhynchos
ENSPMGG00000018553	stau1	100	72.766	ENSACAG00000015909	STAU1	99	72.688	Anolis_carolinensis
ENSPMGG00000018553	stau1	99	72.222	ENSANAG00000032714	STAU1	99	71.546	Aotus_nancymaae
ENSPMGG00000018553	stau1	100	85.100	ENSACLG00000012270	stau1	99	85.366	Astatotilapia_calliptera
ENSPMGG00000018553	stau1	100	77.686	ENSAMXG00000016812	stau1	99	77.148	Astyanax_mexicanus
ENSPMGG00000018553	stau1	97	73.879	ENSBTAG00000000241	STAU1	88	74.023	Bos_taurus
ENSPMGG00000018553	stau1	99	72.065	ENSCJAG00000016233	STAU1	88	74.023	Callithrix_jacchus
ENSPMGG00000018553	stau1	99	71.862	ENSCAFG00000011347	STAU1	95	71.210	Canis_familiaris
ENSPMGG00000018553	stau1	99	71.000	ENSCAFG00020017123	STAU1	99	73.443	Canis_lupus_dingo
ENSPMGG00000018553	stau1	99	71.457	ENSCHIG00000001799	-	99	73.828	Capra_hircus
ENSPMGG00000018553	stau1	99	70.648	ENSTSYG00000036179	-	88	72.656	Carlito_syrichta
ENSPMGG00000018553	stau1	99	71.197	ENSCAPG00000017041	STAU1	99	73.547	Cavia_aperea
ENSPMGG00000018553	stau1	98	69.796	ENSCPOG00000005566	STAU1	99	72.874	Cavia_porcellus
ENSPMGG00000018553	stau1	99	71.200	ENSCCAG00000034339	STAU1	88	73.501	Cebus_capucinus
ENSPMGG00000018553	stau1	96	76.190	ENSCATG00000028474	STAU1	99	74.405	Cercocebus_atys
ENSPMGG00000018553	stau1	99	58.182	ENSCLAG00000002784	-	100	61.323	Chinchilla_lanigera
ENSPMGG00000018553	stau1	98	72.008	ENSCLAG00000006516	-	99	75.050	Chinchilla_lanigera
ENSPMGG00000018553	stau1	99	72.267	ENSCSAG00000014986	STAU1	99	74.950	Chlorocebus_sabaeus
ENSPMGG00000018553	stau1	99	72.525	ENSCHOG00000001511	STAU1	99	74.560	Choloepus_hoffmanni
ENSPMGG00000018553	stau1	100	73.115	ENSCPBG00000026741	STAU1	100	72.973	Chrysemys_picta_bellii
ENSPMGG00000018553	stau1	99	72.470	ENSCANG00000039220	STAU1	99	69.118	Colobus_angolensis_palliatus
ENSPMGG00000018553	stau1	98	67.611	ENSCGRG00001013453	Stau1	99	70.482	Cricetulus_griseus_chok1gshd
ENSPMGG00000018553	stau1	98	67.611	ENSCGRG00000007216	Stau1	99	70.482	Cricetulus_griseus_crigri
ENSPMGG00000018553	stau1	99	74.894	ENSCSEG00000000792	stau1	99	76.023	Cynoglossus_semilaevis
ENSPMGG00000018553	stau1	100	81.520	ENSCVAG00000005906	stau1	99	81.836	Cyprinodon_variegatus
ENSPMGG00000018553	stau1	100	76.824	ENSDARG00000044182	stau1	100	78.091	Danio_rerio
ENSPMGG00000018553	stau1	99	72.525	ENSDNOG00000014933	STAU1	92	74.609	Dasypus_novemcinctus
ENSPMGG00000018553	stau1	98	70.637	ENSDORG00000030220	Stau1	99	73.428	Dipodomys_ordii
ENSPMGG00000018553	stau1	84	72.000	ENSETEG00000018235	STAU1	75	76.589	Echinops_telfairi
ENSPMGG00000018553	stau1	99	72.470	ENSEASG00005023343	STAU1	96	72.615	Equus_asinus_asinus
ENSPMGG00000018553	stau1	99	72.470	ENSECAG00000012894	STAU1	96	73.638	Equus_caballus
ENSPMGG00000018553	stau1	77	73.333	ENSEEUG00000014344	STAU1	68	77.806	Erinaceus_europaeus
ENSPMGG00000018553	stau1	100	78.261	ENSELUG00000002529	stau1	99	78.571	Esox_lucius
ENSPMGG00000018553	stau1	99	73.517	ENSFCAG00000001447	STAU1	99	72.824	Felis_catus
ENSPMGG00000018553	stau1	99	73.684	ENSFALG00000012940	STAU1	100	72.493	Ficedula_albicollis
ENSPMGG00000018553	stau1	99	59.831	ENSFDAG00000020837	-	98	58.686	Fukomys_damarensis
ENSPMGG00000018553	stau1	98	71.400	ENSFDAG00000014119	-	99	74.245	Fukomys_damarensis
ENSPMGG00000018553	stau1	100	84.384	ENSFHEG00000013517	stau1	100	84.384	Fundulus_heteroclitus
ENSPMGG00000018553	stau1	93	79.048	ENSGMOG00000016850	stau1	100	69.231	Gadus_morhua
ENSPMGG00000018553	stau1	99	74.696	ENSGALG00000004736	STAU1	100	73.496	Gallus_gallus
ENSPMGG00000018553	stau1	100	83.954	ENSGAFG00000010437	stau1	100	83.954	Gambusia_affinis
ENSPMGG00000018553	stau1	100	84.648	ENSGACG00000001352	stau1	99	84.770	Gasterosteus_aculeatus
ENSPMGG00000018553	stau1	99	74.848	ENSGAGG00000009825	STAU1	100	73.352	Gopherus_agassizii
ENSPMGG00000018553	stau1	99	71.753	ENSGGOG00000025351	STAU1	99	77.624	Gorilla_gorilla
ENSPMGG00000018553	stau1	100	84.957	ENSHBUG00000023668	stau1	99	85.222	Haplochromis_burtoni
ENSPMGG00000018553	stau1	98	72.485	ENSHGLG00000008730	STAU1	99	75.203	Heterocephalus_glaber_female
ENSPMGG00000018553	stau1	98	72.485	ENSHGLG00100000098	STAU1	99	75.203	Heterocephalus_glaber_male
ENSPMGG00000018553	stau1	100	79.513	ENSHCOG00000018461	stau1	99	80.201	Hippocampus_comes
ENSPMGG00000018553	stau1	99	74.058	ENSIPUG00000023725	stau1	96	74.625	Ictalurus_punctatus
ENSPMGG00000018553	stau1	98	72.074	ENSSTOG00000003634	STAU1	99	74.949	Ictidomys_tridecemlineatus
ENSPMGG00000018553	stau1	98	70.637	ENSJJAG00000020032	Stau1	99	73.171	Jaculus_jaculus
ENSPMGG00000018553	stau1	100	82.724	ENSKMAG00000007135	stau1	99	82.286	Kryptolebias_marmoratus
ENSPMGG00000018553	stau1	100	84.935	ENSLBEG00000020172	stau1	100	84.935	Labrus_bergylta
ENSPMGG00000018553	stau1	99	74.545	ENSLACG00000016157	STAU1	99	70.678	Latimeria_chalumnae
ENSPMGG00000018553	stau1	99	77.236	ENSLOCG00000003134	stau1	100	75.862	Lepisosteus_oculatus
ENSPMGG00000018553	stau1	99	72.470	ENSLAFG00000003238	STAU1	99	74.414	Loxodonta_africana
ENSPMGG00000018553	stau1	96	76.190	ENSMFAG00000040931	STAU1	98	77.820	Macaca_fascicularis
ENSPMGG00000018553	stau1	99	71.400	ENSMMUG00000002302	STAU1	98	77.820	Macaca_mulatta
ENSPMGG00000018553	stau1	96	75.589	ENSMNEG00000033821	STAU1	99	74.405	Macaca_nemestrina
ENSPMGG00000018553	stau1	99	72.267	ENSMLEG00000031383	STAU1	94	69.305	Mandrillus_leucophaeus
ENSPMGG00000018553	stau1	100	86.083	ENSMAMG00000017586	stau1	100	86.083	Mastacembelus_armatus
ENSPMGG00000018553	stau1	100	84.505	ENSMZEG00005015605	stau1	99	84.626	Maylandia_zebra
ENSPMGG00000018553	stau1	99	73.800	ENSMGAG00000004719	STAU1	100	71.349	Meleagris_gallopavo
ENSPMGG00000018553	stau1	98	67.611	ENSMAUG00000013846	Stau1	99	70.482	Mesocricetus_auratus
ENSPMGG00000018553	stau1	99	70.600	ENSMICG00000001995	STAU1	88	73.114	Microcebus_murinus
ENSPMGG00000018553	stau1	98	68.660	ENSMOCG00000018743	Stau1	99	70.683	Microtus_ochrogaster
ENSPMGG00000018553	stau1	99	82.906	ENSMMOG00000015455	stau1	99	84.040	Mola_mola
ENSPMGG00000018553	stau1	99	73.684	ENSMODG00000016276	STAU1	95	74.574	Monodelphis_domestica
ENSPMGG00000018553	stau1	99	86.782	ENSMALG00000000045	stau1	99	86.782	Monopterus_albus
ENSPMGG00000018553	stau1	98	68.238	MGP_CAROLIEiJ_G0024699	Stau1	100	70.935	Mus_caroli
ENSPMGG00000018553	stau1	98	68.238	ENSMUSG00000039536	Stau1	100	70.732	Mus_musculus
ENSPMGG00000018553	stau1	98	67.623	MGP_PahariEiJ_G0026141	Stau1	99	70.183	Mus_pahari
ENSPMGG00000018553	stau1	98	68.238	MGP_SPRETEiJ_G0025619	Stau1	100	70.732	Mus_spretus
ENSPMGG00000018553	stau1	99	71.660	ENSMPUG00000017581	STAU1	99	70.178	Mustela_putorius_furo
ENSPMGG00000018553	stau1	99	71.053	ENSMLUG00000008407	STAU1	85	73.242	Myotis_lucifugus
ENSPMGG00000018553	stau1	98	70.040	ENSNGAG00000007108	Stau1	99	72.837	Nannospalax_galili
ENSPMGG00000018553	stau1	100	84.957	ENSNBRG00000017596	stau1	99	85.222	Neolamprologus_brichardi
ENSPMGG00000018553	stau1	99	72.267	ENSNLEG00000006955	STAU1	99	74.405	Nomascus_leucogenys
ENSPMGG00000018553	stau1	92	74.728	ENSMEUG00000003263	STAU1	80	77.657	Notamacropus_eugenii
ENSPMGG00000018553	stau1	99	70.243	ENSOPRG00000014569	STAU1	88	72.781	Ochotona_princeps
ENSPMGG00000018553	stau1	99	72.267	ENSODEG00000006523	STAU1	99	74.950	Octodon_degus
ENSPMGG00000018553	stau1	100	82.451	ENSONIG00000004152	stau1	98	82.706	Oreochromis_niloticus
ENSPMGG00000018553	stau1	99	72.200	ENSOANG00000006394	STAU1	100	70.438	Ornithorhynchus_anatinus
ENSPMGG00000018553	stau1	99	71.255	ENSOCUG00000006214	STAU1	88	73.633	Oryctolagus_cuniculus
ENSPMGG00000018553	stau1	100	80.946	ENSOMEG00000002388	stau1	100	81.089	Oryzias_melastigma
ENSPMGG00000018553	stau1	99	71.862	ENSOGAG00000002127	STAU1	85	73.828	Otolemur_garnettii
ENSPMGG00000018553	stau1	99	48.884	ENSOGAG00000028222	-	98	50.800	Otolemur_garnettii
ENSPMGG00000018553	stau1	99	71.457	ENSOARG00000012204	STAU1	99	70.178	Ovis_aries
ENSPMGG00000018553	stau1	99	71.753	ENSPPAG00000032023	STAU1	99	77.624	Pan_paniscus
ENSPMGG00000018553	stau1	99	73.517	ENSPPRG00000003436	STAU1	99	75.351	Panthera_pardus
ENSPMGG00000018553	stau1	99	73.517	ENSPTIG00000011768	STAU1	99	74.111	Panthera_tigris_altaica
ENSPMGG00000018553	stau1	99	71.600	ENSPTRG00000023130	STAU1	99	77.624	Pan_troglodytes
ENSPMGG00000018553	stau1	96	76.190	ENSPANG00000020560	STAU1	99	70.565	Papio_anubis
ENSPMGG00000018553	stau1	100	77.079	ENSPKIG00000024588	stau1	99	76.462	Paramormyrops_kingsleyae
ENSPMGG00000018553	stau1	99	74.848	ENSPSIG00000010731	STAU1	99	73.496	Pelodiscus_sinensis
ENSPMGG00000018553	stau1	98	68.016	ENSPEMG00000022045	Stau1	99	70.482	Peromyscus_maniculatus_bairdii
ENSPMGG00000018553	stau1	99	78.541	ENSPCIG00000023269	STAU1	99	77.849	Phascolarctos_cinereus
ENSPMGG00000018553	stau1	100	83.691	ENSPFOG00000017253	stau1	100	83.834	Poecilia_formosa
ENSPMGG00000018553	stau1	63	84.932	ENSPLAG00000014829	stau1	96	81.912	Poecilia_latipinna
ENSPMGG00000018553	stau1	100	80.229	ENSPMEG00000007495	stau1	100	80.372	Poecilia_mexicana
ENSPMGG00000018553	stau1	100	83.548	ENSPREG00000003477	stau1	100	83.691	Poecilia_reticulata
ENSPMGG00000018553	stau1	99	72.065	ENSPPYG00000011111	STAU1	88	74.364	Pongo_abelii
ENSPMGG00000018553	stau1	94	64.807	ENSPCAG00000002459	STAU1	88	66.046	Procavia_capensis
ENSPMGG00000018553	stau1	99	71.255	ENSPCOG00000027746	STAU1	99	73.611	Propithecus_coquereli
ENSPMGG00000018553	stau1	83	71.812	ENSPVAG00000015019	STAU1	74	78.595	Pteropus_vampyrus
ENSPMGG00000018553	stau1	100	84.957	ENSPNYG00000014436	stau1	99	85.222	Pundamilia_nyererei
ENSPMGG00000018553	stau1	100	76.934	ENSPNAG00000011323	stau1	96	78.390	Pygocentrus_nattereri
ENSPMGG00000018553	stau1	98	67.206	ENSRNOG00000007781	Stau1	99	70.080	Rattus_norvegicus
ENSPMGG00000018553	stau1	99	72.267	ENSRBIG00000037345	STAU1	99	74.451	Rhinopithecus_bieti
ENSPMGG00000018553	stau1	96	75.589	ENSRROG00000039008	STAU1	99	74.451	Rhinopithecus_roxellana
ENSPMGG00000018553	stau1	99	73.402	ENSSBOG00000034448	STAU1	99	72.727	Saimiri_boliviensis_boliviensis
ENSPMGG00000018553	stau1	99	73.684	ENSSHAG00000009492	STAU1	95	74.574	Sarcophilus_harrisii
ENSPMGG00000018553	stau1	100	77.890	ENSSFOG00015021497	stau1	99	77.762	Scleropages_formosus
ENSPMGG00000018553	stau1	100	85.940	ENSSMAG00000017410	stau1	100	85.940	Scophthalmus_maximus
ENSPMGG00000018553	stau1	100	86.801	ENSSDUG00000019439	stau1	99	86.925	Seriola_dumerili
ENSPMGG00000018553	stau1	100	87.088	ENSSLDG00000025040	stau1	99	87.213	Seriola_lalandi_dorsalis
ENSPMGG00000018553	stau1	100	73.684	ENSSPUG00000017983	STAU1	99	73.542	Sphenodon_punctatus
ENSPMGG00000018553	stau1	100	87.088	ENSSPAG00000019275	stau1	99	87.213	Stegastes_partitus
ENSPMGG00000018553	stau1	99	72.470	ENSSSCG00000027444	STAU1	99	75.415	Sus_scrofa
ENSPMGG00000018553	stau1	99	73.253	ENSTGUG00000008784	STAU1	100	69.626	Taeniopygia_guttata
ENSPMGG00000018553	stau1	100	83.537	ENSTRUG00000005837	stau1	99	84.029	Takifugu_rubripes
ENSPMGG00000018553	stau1	99	81.414	ENSTNIG00000014732	stau1	99	81.872	Tetraodon_nigroviridis
ENSPMGG00000018553	stau1	99	60.121	ENSTBEG00000009404	STAU1	88	62.891	Tupaia_belangeri
ENSPMGG00000018553	stau1	92	71.024	ENSTTRG00000004285	STAU1	79	74.187	Tursiops_truncatus
ENSPMGG00000018553	stau1	99	73.389	ENSUAMG00000025449	STAU1	99	73.715	Ursus_americanus
ENSPMGG00000018553	stau1	74	66.842	ENSUMAG00000024475	STAU1	89	70.909	Ursus_maritimus
ENSPMGG00000018553	stau1	99	72.267	ENSVPAG00000001313	STAU1	88	74.414	Vicugna_pacos
ENSPMGG00000018553	stau1	99	71.000	ENSVVUG00000022325	STAU1	95	71.363	Vulpes_vulpes
ENSPMGG00000018553	stau1	99	71.111	ENSXETG00000001783	stau1	95	71.493	Xenopus_tropicalis
ENSPMGG00000018553	stau1	63	83.618	ENSXCOG00000008804	stau1	94	83.646	Xiphophorus_couchianus
ENSPMGG00000018553	stau1	100	83.811	ENSXMAG00000016175	stau1	100	83.811	Xiphophorus_maculatus