EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000018890 (Gene tree)
Gene ID: -
Gene Symbol: tdrd1
Alias: -
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 7885 bases
Position: chrKN463020.1:661230-669114
Accession: ZDB-GENE-070803-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000023376	TUDOR	PF00567.24	3.4e-91	1	4
ENSPMGP00000023376	TUDOR	PF00567.24	3.4e-91	2	4
ENSPMGP00000023376	TUDOR	PF00567.24	3.4e-91	3	4
ENSPMGP00000023376	TUDOR	PF00567.24	3.4e-91	4	4
ENSPMGP00000023393	TUDOR	PF00567.24	3.9e-81	1	4
ENSPMGP00000023393	TUDOR	PF00567.24	3.9e-81	2	4
ENSPMGP00000023393	TUDOR	PF00567.24	3.9e-81	3	4
ENSPMGP00000023393	TUDOR	PF00567.24	3.9e-81	4	4
ENSPMGP00000023376	SMN	PF06003.12	2.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000024900	-	2553	-	ENSPMGP00000023376	850 (aa)	-	-
ENSPMGT00000024917	-	2355	-	ENSPMGP00000023393	785 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000018890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000018890's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000018890	tdrd1	100	32.120	ENSG00000095627	TDRD1	81	32.327	Homo_sapiens
ENSPMGG00000018890	tdrd1	99	52.285	ENSAPOG00000023199	tdrd1	86	52.009	Acanthochromis_polyacanthus
ENSPMGG00000018890	tdrd1	98	32.545	ENSAMEG00000015182	TDRD1	82	32.558	Ailuropoda_melanoleuca
ENSPMGG00000018890	tdrd1	99	52.290	ENSACIG00000010576	tdrd1	83	52.247	Amphilophus_citrinellus
ENSPMGG00000018890	tdrd1	99	62.195	ENSAOCG00000007059	tdrd1	76	62.298	Amphiprion_ocellaris
ENSPMGG00000018890	tdrd1	99	51.728	ENSAPEG00000017049	tdrd1	82	52.365	Amphiprion_percula
ENSPMGG00000018890	tdrd1	100	52.381	ENSATEG00000021627	tdrd1	87	52.381	Anabas_testudineus
ENSPMGG00000018890	tdrd1	99	31.746	ENSAPLG00000012609	TDRD1	91	31.746	Anas_platyrhynchos
ENSPMGG00000018890	tdrd1	99	31.721	ENSANAG00000035710	TDRD1	81	31.585	Aotus_nancymaae
ENSPMGG00000018890	tdrd1	100	51.753	ENSACLG00000014107	tdrd1	82	51.753	Astatotilapia_calliptera
ENSPMGG00000018890	tdrd1	99	42.116	ENSAMXG00000015146	tdrd1	92	41.474	Astyanax_mexicanus
ENSPMGG00000018890	tdrd1	99	31.951	ENSBTAG00000006855	TDRD1	81	31.951	Bos_taurus
ENSPMGG00000018890	tdrd1	99	32.435	ENSCJAG00000019270	TDRD1	81	32.435	Callithrix_jacchus
ENSPMGG00000018890	tdrd1	98	33.333	ENSCAFG00000011266	TDRD1	82	33.333	Canis_familiaris
ENSPMGG00000018890	tdrd1	98	33.333	ENSCAFG00020012373	TDRD1	84	32.034	Canis_lupus_dingo
ENSPMGG00000018890	tdrd1	99	32.135	ENSCHIG00000012766	TDRD1	81	32.135	Capra_hircus
ENSPMGG00000018890	tdrd1	99	32.979	ENSTSYG00000004935	TDRD1	83	32.979	Carlito_syrichta
ENSPMGG00000018890	tdrd1	98	30.734	ENSCPOG00000004190	TDRD1	80	32.896	Cavia_porcellus
ENSPMGG00000018890	tdrd1	99	32.548	ENSCCAG00000027375	TDRD1	81	32.478	Cebus_capucinus
ENSPMGG00000018890	tdrd1	100	32.372	ENSCATG00000035999	TDRD1	84	32.630	Cercocebus_atys
ENSPMGG00000018890	tdrd1	95	32.503	ENSCLAG00000003935	TDRD1	78	32.503	Chinchilla_lanigera
ENSPMGG00000018890	tdrd1	100	32.585	ENSCSAG00000005071	TDRD1	79	32.585	Chlorocebus_sabaeus
ENSPMGG00000018890	tdrd1	95	33.333	ENSCHOG00000001690	TDRD1	65	33.333	Choloepus_hoffmanni
ENSPMGG00000018890	tdrd1	99	34.043	ENSCPBG00000003780	TDRD1	82	34.043	Chrysemys_picta_bellii
ENSPMGG00000018890	tdrd1	100	32.406	ENSCANG00000035172	TDRD1	80	32.626	Colobus_angolensis_palliatus
ENSPMGG00000018890	tdrd1	99	32.056	ENSCGRG00001004632	Tdrd1	83	32.056	Cricetulus_griseus_chok1gshd
ENSPMGG00000018890	tdrd1	95	31.633	ENSCGRG00000004981	Tdrd1	80	31.633	Cricetulus_griseus_crigri
ENSPMGG00000018890	tdrd1	100	44.221	ENSCSEG00000006983	tdrd1	87	44.994	Cynoglossus_semilaevis
ENSPMGG00000018890	tdrd1	99	47.231	ENSCVAG00000020980	tdrd1	91	47.231	Cyprinodon_variegatus
ENSPMGG00000018890	tdrd1	99	43.261	ENSDARG00000007465	tdrd1	81	43.261	Danio_rerio
ENSPMGG00000018890	tdrd1	98	31.843	ENSDNOG00000012114	TDRD1	78	32.244	Dasypus_novemcinctus
ENSPMGG00000018890	tdrd1	98	32.027	ENSDORG00000009986	Tdrd1	81	32.027	Dipodomys_ordii
ENSPMGG00000018890	tdrd1	89	33.379	ENSETEG00000020143	TDRD1	67	33.379	Echinops_telfairi
ENSPMGG00000018890	tdrd1	99	31.844	ENSEASG00005014802	TDRD1	81	31.644	Equus_asinus_asinus
ENSPMGG00000018890	tdrd1	99	31.813	ENSECAG00000009748	TDRD1	77	31.813	Equus_caballus
ENSPMGG00000018890	tdrd1	97	30.411	ENSEEUG00000010076	TDRD1	74	36.145	Erinaceus_europaeus
ENSPMGG00000018890	tdrd1	94	67.647	ENSELUG00000024364	tdrd1	78	67.647	Esox_lucius
ENSPMGG00000018890	tdrd1	99	31.038	ENSFCAG00000000632	TDRD1	81	31.748	Felis_catus
ENSPMGG00000018890	tdrd1	90	30.693	ENSFALG00000002237	TDRD1	85	32.530	Ficedula_albicollis
ENSPMGG00000018890	tdrd1	95	32.155	ENSFDAG00000013225	TDRD1	79	32.155	Fukomys_damarensis
ENSPMGG00000018890	tdrd1	100	44.643	ENSFHEG00000009203	tdrd1	89	44.643	Fundulus_heteroclitus
ENSPMGG00000018890	tdrd1	88	52.778	ENSGMOG00000016797	-	69	52.778	Gadus_morhua
ENSPMGG00000018890	tdrd1	98	49.620	ENSGAFG00000002668	tdrd1	82	48.941	Gambusia_affinis
ENSPMGG00000018890	tdrd1	90	50.062	ENSGACG00000006590	tdrd1	99	50.980	Gasterosteus_aculeatus
ENSPMGG00000018890	tdrd1	100	32.120	ENSGGOG00000004250	TDRD1	81	32.327	Gorilla_gorilla
ENSPMGG00000018890	tdrd1	100	51.753	ENSHBUG00000005216	tdrd1	84	51.173	Haplochromis_burtoni
ENSPMGG00000018890	tdrd1	95	32.213	ENSHGLG00000010877	TDRD1	78	32.213	Heterocephalus_glaber_female
ENSPMGG00000018890	tdrd1	95	32.251	ENSHGLG00100013857	TDRD1	84	32.251	Heterocephalus_glaber_male
ENSPMGG00000018890	tdrd1	94	53.479	ENSHCOG00000002840	tdrd1	81	44.085	Hippocampus_comes
ENSPMGG00000018890	tdrd1	94	73.529	ENSIPUG00000017232	tdrd1	75	73.529	Ictalurus_punctatus
ENSPMGG00000018890	tdrd1	99	32.537	ENSSTOG00000003221	TDRD1	82	32.856	Ictidomys_tridecemlineatus
ENSPMGG00000018890	tdrd1	98	32.540	ENSJJAG00000014720	Tdrd1	81	32.151	Jaculus_jaculus
ENSPMGG00000018890	tdrd1	100	50.212	ENSKMAG00000018558	tdrd1	89	50.212	Kryptolebias_marmoratus
ENSPMGG00000018890	tdrd1	91	80.556	ENSLBEG00000004161	tdrd1	74	80.556	Labrus_bergylta
ENSPMGG00000018890	tdrd1	98	32.561	ENSLACG00000011559	TDRD1	84	31.550	Latimeria_chalumnae
ENSPMGG00000018890	tdrd1	99	39.013	ENSLOCG00000012030	tdrd1	100	38.497	Lepisosteus_oculatus
ENSPMGG00000018890	tdrd1	94	32.716	ENSLAFG00000011575	TDRD1	93	33.787	Loxodonta_africana
ENSPMGG00000018890	tdrd1	100	32.692	ENSMFAG00000043487	TDRD1	80	32.924	Macaca_fascicularis
ENSPMGG00000018890	tdrd1	100	32.692	ENSMMUG00000022517	TDRD1	80	32.924	Macaca_mulatta
ENSPMGG00000018890	tdrd1	100	32.727	ENSMNEG00000031108	TDRD1	80	32.961	Macaca_nemestrina
ENSPMGG00000018890	tdrd1	100	32.764	ENSMLEG00000032281	TDRD1	80	32.999	Mandrillus_leucophaeus
ENSPMGG00000018890	tdrd1	100	53.165	ENSMAMG00000015287	tdrd1	89	51.274	Mastacembelus_armatus
ENSPMGG00000018890	tdrd1	100	51.860	ENSMZEG00005025315	tdrd1	83	51.860	Maylandia_zebra
ENSPMGG00000018890	tdrd1	87	31.211	ENSMGAG00000011067	TDRD1	86	31.211	Meleagris_gallopavo
ENSPMGG00000018890	tdrd1	90	33.929	ENSMAUG00000012164	Tdrd1	81	33.929	Mesocricetus_auratus
ENSPMGG00000018890	tdrd1	99	32.095	ENSMICG00000016190	TDRD1	81	32.058	Microcebus_murinus
ENSPMGG00000018890	tdrd1	99	31.869	ENSMOCG00000022360	Tdrd1	80	31.906	Microtus_ochrogaster
ENSPMGG00000018890	tdrd1	100	51.271	ENSMMOG00000014068	tdrd1	86	51.271	Mola_mola
ENSPMGG00000018890	tdrd1	99	31.094	ENSMODG00000009788	TDRD1	81	31.094	Monodelphis_domestica
ENSPMGG00000018890	tdrd1	100	53.070	ENSMALG00000022115	tdrd1	84	53.180	Monopterus_albus
ENSPMGG00000018890	tdrd1	95	32.844	MGP_CAROLIEiJ_G0023095	Tdrd1	80	33.070	Mus_caroli
ENSPMGG00000018890	tdrd1	98	33.004	ENSMUSG00000025081	Tdrd1	80	33.114	Mus_musculus
ENSPMGG00000018890	tdrd1	95	33.059	MGP_PahariEiJ_G0014583	Tdrd1	80	33.070	Mus_pahari
ENSPMGG00000018890	tdrd1	95	33.409	MGP_SPRETEiJ_G0024016	Tdrd1	74	34.950	Mus_spretus
ENSPMGG00000018890	tdrd1	93	32.087	ENSMPUG00000001987	TDRD1	74	34.158	Mustela_putorius_furo
ENSPMGG00000018890	tdrd1	95	32.050	ENSNGAG00000015231	Tdrd1	79	33.871	Nannospalax_galili
ENSPMGG00000018890	tdrd1	100	51.706	ENSNBRG00000017920	tdrd1	85	51.706	Neolamprologus_brichardi
ENSPMGG00000018890	tdrd1	99	32.065	ENSNLEG00000016228	TDRD1	80	32.065	Nomascus_leucogenys
ENSPMGG00000018890	tdrd1	87	30.322	ENSMEUG00000007717	TDRD1	76	30.322	Notamacropus_eugenii
ENSPMGG00000018890	tdrd1	100	30.654	ENSOPRG00000009180	TDRD1	80	31.084	Ochotona_princeps
ENSPMGG00000018890	tdrd1	95	31.849	ENSODEG00000011965	TDRD1	79	31.849	Octodon_degus
ENSPMGG00000018890	tdrd1	100	52.859	ENSONIG00000016382	tdrd1	83	52.355	Oreochromis_niloticus
ENSPMGG00000018890	tdrd1	100	30.325	ENSOANG00000001562	TDRD1	83	32.396	Ornithorhynchus_anatinus
ENSPMGG00000018890	tdrd1	95	32.733	ENSOCUG00000025327	TDRD1	83	32.733	Oryctolagus_cuniculus
ENSPMGG00000018890	tdrd1	99	47.178	ENSORLG00000004833	tdrd1	83	47.178	Oryzias_latipes
ENSPMGG00000018890	tdrd1	99	46.971	ENSORLG00020019231	tdrd1	93	46.971	Oryzias_latipes_hni
ENSPMGG00000018890	tdrd1	99	47.015	ENSORLG00015017184	tdrd1	86	45.891	Oryzias_latipes_hsok
ENSPMGG00000018890	tdrd1	91	73.529	ENSOMEG00000023637	tdrd1	73	73.529	Oryzias_melastigma
ENSPMGG00000018890	tdrd1	99	32.018	ENSOGAG00000001370	TDRD1	80	32.018	Otolemur_garnettii
ENSPMGG00000018890	tdrd1	99	32.135	ENSOARG00000014200	-	81	32.135	Ovis_aries
ENSPMGG00000018890	tdrd1	100	32.120	ENSPPAG00000041621	TDRD1	81	32.327	Pan_paniscus
ENSPMGG00000018890	tdrd1	99	30.813	ENSPPRG00000000191	TDRD1	81	31.486	Panthera_pardus
ENSPMGG00000018890	tdrd1	99	30.901	ENSPTIG00000010264	TDRD1	81	32.244	Panthera_tigris_altaica
ENSPMGG00000018890	tdrd1	100	32.120	ENSPTRG00000002958	TDRD1	81	32.327	Pan_troglodytes
ENSPMGG00000018890	tdrd1	100	32.479	ENSPANG00000020752	TDRD1	82	32.479	Papio_anubis
ENSPMGG00000018890	tdrd1	94	67.742	ENSPKIG00000010586	tdrd1	77	67.742	Paramormyrops_kingsleyae
ENSPMGG00000018890	tdrd1	99	31.568	ENSPSIG00000014655	TDRD1	79	31.892	Pelodiscus_sinensis
ENSPMGG00000018890	tdrd1	98	32.623	ENSPEMG00000004582	Tdrd1	80	32.623	Peromyscus_maniculatus_bairdii
ENSPMGG00000018890	tdrd1	90	34.783	ENSPMAG00000004416	-	100	35.897	Petromyzon_marinus
ENSPMGG00000018890	tdrd1	99	31.146	ENSPCIG00000009739	TDRD1	81	32.106	Phascolarctos_cinereus
ENSPMGG00000018890	tdrd1	98	49.345	ENSPFOG00000002145	tdrd1	86	49.345	Poecilia_formosa
ENSPMGG00000018890	tdrd1	99	49.838	ENSPLAG00000010241	tdrd1	80	49.838	Poecilia_latipinna
ENSPMGG00000018890	tdrd1	99	49.239	ENSPMEG00000021893	tdrd1	82	49.239	Poecilia_mexicana
ENSPMGG00000018890	tdrd1	100	49.411	ENSPREG00000022663	tdrd1	83	48.767	Poecilia_reticulata
ENSPMGG00000018890	tdrd1	99	31.760	ENSPPYG00000002671	TDRD1	78	31.760	Pongo_abelii
ENSPMGG00000018890	tdrd1	99	31.250	ENSPCAG00000006692	TDRD1	70	30.456	Procavia_capensis
ENSPMGG00000018890	tdrd1	99	32.356	ENSPCOG00000026619	TDRD1	81	32.356	Propithecus_coquereli
ENSPMGG00000018890	tdrd1	99	31.348	ENSPVAG00000003055	TDRD1	80	31.348	Pteropus_vampyrus
ENSPMGG00000018890	tdrd1	100	51.279	ENSPNYG00000001706	tdrd1	84	51.279	Pundamilia_nyererei
ENSPMGG00000018890	tdrd1	94	77.419	ENSPNAG00000005831	tdrd1	78	77.419	Pygocentrus_nattereri
ENSPMGG00000018890	tdrd1	95	32.883	ENSRNOG00000017064	Tdrd1	81	32.883	Rattus_norvegicus
ENSPMGG00000018890	tdrd1	100	32.265	ENSRBIG00000029668	TDRD1	81	32.660	Rhinopithecus_bieti
ENSPMGG00000018890	tdrd1	100	32.372	ENSRROG00000043379	TDRD1	80	32.589	Rhinopithecus_roxellana
ENSPMGG00000018890	tdrd1	99	32.846	ENSSBOG00000023561	TDRD1	80	32.589	Saimiri_boliviensis_boliviensis
ENSPMGG00000018890	tdrd1	99	31.539	ENSSHAG00000014311	TDRD1	81	31.539	Sarcophilus_harrisii
ENSPMGG00000018890	tdrd1	99	37.890	ENSSFOG00015022020	tdrd1	92	38.159	Scleropages_formosus
ENSPMGG00000018890	tdrd1	100	51.155	ENSSMAG00000019271	tdrd1	88	50.328	Scophthalmus_maximus
ENSPMGG00000018890	tdrd1	100	53.109	ENSSDUG00000022012	tdrd1	86	53.109	Seriola_dumerili
ENSPMGG00000018890	tdrd1	100	52.687	ENSSLDG00000006423	tdrd1	87	52.792	Seriola_lalandi_dorsalis
ENSPMGG00000018890	tdrd1	99	31.970	ENSSARG00000008828	TDRD1	63	31.970	Sorex_araneus
ENSPMGG00000018890	tdrd1	98	30.272	ENSSPUG00000005015	TDRD1	82	32.181	Sphenodon_punctatus
ENSPMGG00000018890	tdrd1	99	51.046	ENSSPAG00000018805	tdrd1	84	50.581	Stegastes_partitus
ENSPMGG00000018890	tdrd1	99	31.937	ENSSSCG00000021075	TDRD1	80	31.937	Sus_scrofa
ENSPMGG00000018890	tdrd1	90	31.086	ENSTGUG00000010905	TDRD1	90	32.759	Taeniopygia_guttata
ENSPMGG00000018890	tdrd1	100	48.794	ENSTRUG00000012142	tdrd1	91	46.580	Takifugu_rubripes
ENSPMGG00000018890	tdrd1	95	51.654	ENSTNIG00000018898	tdrd1	99	51.654	Tetraodon_nigroviridis
ENSPMGG00000018890	tdrd1	99	40.278	ENSTBEG00000014417	-	75	40.278	Tupaia_belangeri
ENSPMGG00000018890	tdrd1	99	32.086	ENSTTRG00000010147	TDRD1	78	32.086	Tursiops_truncatus
ENSPMGG00000018890	tdrd1	99	31.627	ENSUAMG00000009025	TDRD1	81	33.410	Ursus_americanus
ENSPMGG00000018890	tdrd1	99	32.432	ENSUMAG00000000705	TDRD1	81	32.432	Ursus_maritimus
ENSPMGG00000018890	tdrd1	99	32.323	ENSVPAG00000004000	TDRD1	79	32.323	Vicugna_pacos
ENSPMGG00000018890	tdrd1	98	33.333	ENSVVUG00000009750	TDRD1	82	33.333	Vulpes_vulpes
ENSPMGG00000018890	tdrd1	88	51.565	ENSXCOG00000006412	tdrd1	90	51.293	Xiphophorus_couchianus
ENSPMGG00000018890	tdrd1	100	50.161	ENSXMAG00000008104	tdrd1	89	49.407	Xiphophorus_maculatus