EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000019092 (Gene tree)
Gene ID: -
Gene Symbol: SMARCAL1
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a like 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 6611 bases
Position: chrKN460669.1:6738-13348
Accession: 11102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000023610	ResIII	PF04851.15	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000025157	SMARCAL1-201	2667	-	ENSPMGP00000023610	888 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000019092's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000019092's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000019092	SMARCAL1	78	59.798	ENSG00000138375	SMARCAL1	99	63.975	Homo_sapiens
ENSPMGG00000019092	SMARCAL1	99	73.073	ENSAPOG00000020156	SMARCAL1	99	72.609	Acanthochromis_polyacanthus
ENSPMGG00000019092	SMARCAL1	92	74.241	ENSACIG00000001500	smarcal1	97	73.876	Amphilophus_citrinellus
ENSPMGG00000019092	SMARCAL1	99	72.167	ENSAOCG00000014266	SMARCAL1	100	71.696	Amphiprion_ocellaris
ENSPMGG00000019092	SMARCAL1	99	72.451	ENSAPEG00000015861	SMARCAL1	99	76.154	Amphiprion_percula
ENSPMGG00000019092	SMARCAL1	100	73.002	ENSATEG00000020624	SMARCAL1	100	72.894	Anabas_testudineus
ENSPMGG00000019092	SMARCAL1	78	61.705	ENSAPLG00000009864	SMARCAL1	72	61.582	Anas_platyrhynchos
ENSPMGG00000019092	SMARCAL1	85	59.109	ENSACAG00000004612	SMARCAL1	77	59.109	Anolis_carolinensis
ENSPMGG00000019092	SMARCAL1	98	74.273	ENSACLG00000015990	SMARCAL1	99	74.273	Astatotilapia_calliptera
ENSPMGG00000019092	SMARCAL1	100	63.929	ENSAMXG00000003350	smarcal1	99	63.929	Astyanax_mexicanus
ENSPMGG00000019092	SMARCAL1	86	59.974	ENSCPBG00000013599	SMARCAL1	77	59.974	Chrysemys_picta_bellii
ENSPMGG00000019092	SMARCAL1	74	47.442	ENSCING00000009308	-	100	47.442	Ciona_intestinalis
ENSPMGG00000019092	SMARCAL1	97	68.588	ENSCSEG00000010785	SMARCAL1	99	67.785	Cynoglossus_semilaevis
ENSPMGG00000019092	SMARCAL1	100	68.287	ENSCVAG00000018780	SMARCAL1	100	68.066	Cyprinodon_variegatus
ENSPMGG00000019092	SMARCAL1	59	55.513	ENSEBUG00000011906	SMARCAL1	99	45.479	Eptatretus_burgeri
ENSPMGG00000019092	SMARCAL1	82	68.956	ENSELUG00000010440	-	100	68.538	Esox_lucius
ENSPMGG00000019092	SMARCAL1	90	56.608	ENSFALG00000003981	SMARCAL1	72	61.103	Ficedula_albicollis
ENSPMGG00000019092	SMARCAL1	100	69.613	ENSFHEG00000008380	SMARCAL1	100	69.613	Fundulus_heteroclitus
ENSPMGG00000019092	SMARCAL1	60	71.831	ENSGMOG00000010034	smarcal1	93	71.831	Gadus_morhua
ENSPMGG00000019092	SMARCAL1	83	58.478	ENSGALG00000011475	RPL37A	77	58.478	Gallus_gallus
ENSPMGG00000019092	SMARCAL1	88	77.957	ENSGACG00000006073	SMARCAL1	100	82.037	Gasterosteus_aculeatus
ENSPMGG00000019092	SMARCAL1	84	58.594	ENSGAGG00000015660	SMARCAL1	74	62.990	Gopherus_agassizii
ENSPMGG00000019092	SMARCAL1	98	73.937	ENSHBUG00000002973	smarcal1	99	73.602	Haplochromis_burtoni
ENSPMGG00000019092	SMARCAL1	95	70.520	ENSHCOG00000017921	smarcal1	98	70.520	Hippocampus_comes
ENSPMGG00000019092	SMARCAL1	97	71.216	ENSKMAG00000012023	SMARCAL1	99	71.101	Kryptolebias_marmoratus
ENSPMGG00000019092	SMARCAL1	81	79.339	ENSLBEG00000022915	smarcal1	98	72.996	Labrus_bergylta
ENSPMGG00000019092	SMARCAL1	90	71.879	ENSLBEG00000003493	smarcal1	100	72.112	Labrus_bergylta
ENSPMGG00000019092	SMARCAL1	89	55.237	ENSLACG00000010974	SMARCAL1	99	48.454	Latimeria_chalumnae
ENSPMGG00000019092	SMARCAL1	91	62.102	ENSLOCG00000009637	smarcal1	98	62.102	Lepisosteus_oculatus
ENSPMGG00000019092	SMARCAL1	98	73.138	ENSMAMG00000000828	SMARCAL1	99	72.799	Mastacembelus_armatus
ENSPMGG00000019092	SMARCAL1	98	74.161	ENSMZEG00005007660	SMARCAL1	99	74.161	Maylandia_zebra
ENSPMGG00000019092	SMARCAL1	97	52.122	ENSMGAG00000011658	SMARCAL1	79	58.777	Meleagris_gallopavo
ENSPMGG00000019092	SMARCAL1	91	71.429	ENSMMOG00000003842	smarcal1	93	71.323	Mola_mola
ENSPMGG00000019092	SMARCAL1	89	54.963	ENSMODG00000015544	SMARCAL1	79	56.437	Monodelphis_domestica
ENSPMGG00000019092	SMARCAL1	91	75.866	ENSNBRG00000016273	smarcal1	96	75.495	Neolamprologus_brichardi
ENSPMGG00000019092	SMARCAL1	71	63.133	ENSMEUG00000004395	SMARCAL1	78	59.798	Notamacropus_eugenii
ENSPMGG00000019092	SMARCAL1	98	73.918	ENSONIG00000009036	smarcal1	100	82.370	Oreochromis_niloticus
ENSPMGG00000019092	SMARCAL1	100	67.904	ENSORLG00000016455	SMARCAL1	100	67.756	Oryzias_latipes
ENSPMGG00000019092	SMARCAL1	100	68.231	ENSORLG00020001610	SMARCAL1	100	68.053	Oryzias_latipes_hni
ENSPMGG00000019092	SMARCAL1	100	67.714	ENSORLG00015001865	SMARCAL1	100	68.127	Oryzias_latipes_hsok
ENSPMGG00000019092	SMARCAL1	100	70.146	ENSOMEG00000001845	smarcal1	100	69.921	Oryzias_melastigma
ENSPMGG00000019092	SMARCAL1	81	58.038	ENSPCIG00000022514	SMARCAL1	71	61.646	Phascolarctos_cinereus
ENSPMGG00000019092	SMARCAL1	100	68.506	ENSPFOG00000000560	SMARCAL1	100	68.804	Poecilia_formosa
ENSPMGG00000019092	SMARCAL1	100	68.290	ENSPMEG00000018146	SMARCAL1	100	68.587	Poecilia_mexicana
ENSPMGG00000019092	SMARCAL1	57	82.639	ENSPREG00000009591	SMARCAL1	90	82.639	Poecilia_reticulata
ENSPMGG00000019092	SMARCAL1	100	64.182	ENSPNAG00000014900	smarcal1	95	64.071	Pygocentrus_nattereri
ENSPMGG00000019092	SMARCAL1	99	48.466	ENSSHAG00000013538	SMARCAL1	79	55.662	Sarcophilus_harrisii
ENSPMGG00000019092	SMARCAL1	100	69.883	ENSSMAG00000010427	SMARCAL1	100	69.565	Scophthalmus_maximus
ENSPMGG00000019092	SMARCAL1	98	73.736	ENSSDUG00000017470	SMARCAL1	96	73.516	Seriola_dumerili
ENSPMGG00000019092	SMARCAL1	100	73.031	ENSSLDG00000007224	SMARCAL1	100	72.816	Seriola_lalandi_dorsalis
ENSPMGG00000019092	SMARCAL1	82	62.414	ENSSPUG00000015369	SMARCAL1	73	62.414	Sphenodon_punctatus
ENSPMGG00000019092	SMARCAL1	92	73.939	ENSSPAG00000003742	smarcal1	99	73.939	Stegastes_partitus
ENSPMGG00000019092	SMARCAL1	77	58.102	ENSSSCG00000035501	SMARCAL1	74	57.933	Sus_scrofa
ENSPMGG00000019092	SMARCAL1	77	60.901	ENSTGUG00000005079	SMARCAL1	99	60.901	Taeniopygia_guttata
ENSPMGG00000019092	SMARCAL1	97	64.195	ENSTRUG00000010701	SMARCAL1	97	63.921	Takifugu_rubripes
ENSPMGG00000019092	SMARCAL1	99	43.841	ENSTTRG00000009001	SMARCAL1	99	43.750	Tursiops_truncatus
ENSPMGG00000019092	SMARCAL1	99	55.751	ENSXETG00000000465	smarcal1	99	55.751	Xenopus_tropicalis