EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000019764 (Gene tree)
Gene ID: -
Gene Symbol: trmt1
Alias: -
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 13806 bases
Position: chrKN464947.1:55487-69292
Accession: ZDB-GENE-060810-40
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000024438	zf-CCCH	PF00642.24	1e-06	1	1
ENSPMGP00000024441	zf-CCCH	PF00642.24	1e-06	1	1
ENSPMGP00000024438	TRM	PF02005.16	8.6e-139	1	1
ENSPMGP00000024441	TRM	PF02005.16	1.9e-138	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000026035	-	1857	-	ENSPMGP00000024438	618 (aa)	-	-
ENSPMGT00000026038	-	1920	-	ENSPMGP00000024441	639 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000019764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000019764's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000019764	trmt1	97	63.533	ENSG00000104907	TRMT1	99	72.775	Homo_sapiens
ENSPMGG00000019764	trmt1	90	65.210	ENSAMEG00000012598	TRMT1	85	65.210	Ailuropoda_melanoleuca
ENSPMGG00000019764	trmt1	96	74.380	ENSACIG00000018680	trmt1	95	74.380	Amphilophus_citrinellus
ENSPMGG00000019764	trmt1	96	81.395	ENSAOCG00000006781	trmt1	90	81.229	Amphiprion_ocellaris
ENSPMGG00000019764	trmt1	96	81.561	ENSAPEG00000007712	trmt1	90	81.395	Amphiprion_percula
ENSPMGG00000019764	trmt1	98	80.456	ENSATEG00000001872	trmt1	86	84.283	Anabas_testudineus
ENSPMGG00000019764	trmt1	93	66.099	ENSACAG00000003825	TRMT1	95	66.099	Anolis_carolinensis
ENSPMGG00000019764	trmt1	90	64.747	ENSANAG00000023016	TRMT1	92	64.747	Aotus_nancymaae
ENSPMGG00000019764	trmt1	100	77.244	ENSACLG00000010073	trmt1	98	78.454	Astatotilapia_calliptera
ENSPMGG00000019764	trmt1	98	74.194	ENSAMXG00000012026	trmt1	89	76.134	Astyanax_mexicanus
ENSPMGG00000019764	trmt1	94	63.576	ENSBTAG00000019325	TRMT1	86	63.576	Bos_taurus
ENSPMGG00000019764	trmt1	82	41.748	WBGene00006613	trm-1	93	41.165	Caenorhabditis_elegans
ENSPMGG00000019764	trmt1	90	63.130	ENSCJAG00000004566	TRMT1	88	63.130	Callithrix_jacchus
ENSPMGG00000019764	trmt1	90	65.909	ENSCAFG00000017070	TRMT1	90	65.909	Canis_familiaris
ENSPMGG00000019764	trmt1	90	65.789	ENSCAFG00020005397	TRMT1	88	65.789	Canis_lupus_dingo
ENSPMGG00000019764	trmt1	94	64.026	ENSCHIG00000013569	TRMT1	91	64.026	Capra_hircus
ENSPMGG00000019764	trmt1	96	61.338	ENSTSYG00000003207	TRMT1	93	61.338	Carlito_syrichta
ENSPMGG00000019764	trmt1	84	62.049	ENSCAPG00000003355	TRMT1	94	62.049	Cavia_aperea
ENSPMGG00000019764	trmt1	90	64.974	ENSCPOG00000011754	TRMT1	87	64.974	Cavia_porcellus
ENSPMGG00000019764	trmt1	90	63.351	ENSCCAG00000022263	TRMT1	92	63.351	Cebus_capucinus
ENSPMGG00000019764	trmt1	90	66.376	ENSCATG00000039850	TRMT1	87	66.376	Cercocebus_atys
ENSPMGG00000019764	trmt1	90	48.962	ENSCATG00000038220	-	92	54.873	Cercocebus_atys
ENSPMGG00000019764	trmt1	93	64.167	ENSCLAG00000015295	TRMT1	93	61.770	Chinchilla_lanigera
ENSPMGG00000019764	trmt1	80	66.865	ENSCSAG00000006500	TRMT1	95	66.865	Chlorocebus_sabaeus
ENSPMGG00000019764	trmt1	96	67.107	ENSCPBG00000023866	TRMT1	85	70.796	Chrysemys_picta_bellii
ENSPMGG00000019764	trmt1	87	49.821	ENSCING00000002884	-	98	49.726	Ciona_intestinalis
ENSPMGG00000019764	trmt1	85	51.418	ENSCSAVG00000010927	-	100	49.815	Ciona_savignyi
ENSPMGG00000019764	trmt1	90	52.348	ENSCANG00000040631	TRMT1	87	52.348	Colobus_angolensis_palliatus
ENSPMGG00000019764	trmt1	92	49.915	ENSCANG00000031650	-	91	50.000	Colobus_angolensis_palliatus
ENSPMGG00000019764	trmt1	90	64.098	ENSCGRG00001022594	Trmt1	87	64.098	Cricetulus_griseus_chok1gshd
ENSPMGG00000019764	trmt1	90	64.098	ENSCGRG00000017732	Trmt1	86	64.098	Cricetulus_griseus_crigri
ENSPMGG00000019764	trmt1	91	82.716	ENSCSEG00000001643	trmt1	85	83.689	Cynoglossus_semilaevis
ENSPMGG00000019764	trmt1	91	83.480	ENSCVAG00000011886	trmt1	92	79.801	Cyprinodon_variegatus
ENSPMGG00000019764	trmt1	93	75.211	ENSDARG00000010978	trmt1	88	75.211	Danio_rerio
ENSPMGG00000019764	trmt1	82	44.023	ENSDNOG00000048240	-	89	44.023	Dasypus_novemcinctus
ENSPMGG00000019764	trmt1	94	62.270	ENSDORG00000014298	Trmt1	90	62.270	Dipodomys_ordii
ENSPMGG00000019764	trmt1	86	48.718	FBgn0032430	CG6388	92	48.718	Drosophila_melanogaster
ENSPMGG00000019764	trmt1	69	68.519	ENSEBUG00000003449	trmt1	75	68.519	Eptatretus_burgeri
ENSPMGG00000019764	trmt1	90	65.849	ENSEASG00005004050	TRMT1	90	65.849	Equus_asinus_asinus
ENSPMGG00000019764	trmt1	90	65.849	ENSECAG00000016149	TRMT1	90	65.849	Equus_caballus
ENSPMGG00000019764	trmt1	50	72.112	ENSEEUG00000014102	-	100	55.190	Erinaceus_europaeus
ENSPMGG00000019764	trmt1	98	71.246	ENSELUG00000021659	trmt1	91	72.368	Esox_lucius
ENSPMGG00000019764	trmt1	94	64.013	ENSFCAG00000000483	TRMT1	91	63.682	Felis_catus
ENSPMGG00000019764	trmt1	94	63.439	ENSFDAG00000007386	TRMT1	91	63.439	Fukomys_damarensis
ENSPMGG00000019764	trmt1	90	79.749	ENSFHEG00000012865	trmt1	90	81.633	Fundulus_heteroclitus
ENSPMGG00000019764	trmt1	91	71.429	ENSGMOG00000006564	trmt1	99	71.605	Gadus_morhua
ENSPMGG00000019764	trmt1	91	84.397	ENSGAFG00000011862	trmt1	89	84.574	Gambusia_affinis
ENSPMGG00000019764	trmt1	94	77.740	ENSGACG00000000227	trmt1	95	77.740	Gasterosteus_aculeatus
ENSPMGG00000019764	trmt1	98	66.396	ENSGAGG00000016432	TRMT1	84	70.766	Gopherus_agassizii
ENSPMGG00000019764	trmt1	90	66.087	ENSGGOG00000014007	TRMT1	87	66.028	Gorilla_gorilla
ENSPMGG00000019764	trmt1	88	73.770	ENSHBUG00000008821	trmt1	92	73.077	Haplochromis_burtoni
ENSPMGG00000019764	trmt1	90	65.149	ENSHGLG00000015972	TRMT1	87	65.149	Heterocephalus_glaber_female
ENSPMGG00000019764	trmt1	94	59.000	ENSHGLG00100018112	TRMT1	87	60.839	Heterocephalus_glaber_male
ENSPMGG00000019764	trmt1	92	77.951	ENSHCOG00000009447	trmt1	90	77.951	Hippocampus_comes
ENSPMGG00000019764	trmt1	94	73.466	ENSIPUG00000002899	trmt1	88	73.623	Ictalurus_punctatus
ENSPMGG00000019764	trmt1	98	62.219	ENSSTOG00000012531	TRMT1	88	65.734	Ictidomys_tridecemlineatus
ENSPMGG00000019764	trmt1	90	66.143	ENSJJAG00000017154	Trmt1	88	65.969	Jaculus_jaculus
ENSPMGG00000019764	trmt1	95	81.387	ENSKMAG00000011809	trmt1	95	82.593	Kryptolebias_marmoratus
ENSPMGG00000019764	trmt1	95	79.630	ENSLBEG00000012703	trmt1	89	79.630	Labrus_bergylta
ENSPMGG00000019764	trmt1	91	61.821	ENSLACG00000014585	TRMT1	95	61.592	Latimeria_chalumnae
ENSPMGG00000019764	trmt1	91	70.567	ENSLOCG00000006479	trmt1	99	70.390	Lepisosteus_oculatus
ENSPMGG00000019764	trmt1	98	62.158	ENSLAFG00000014072	TRMT1	88	65.969	Loxodonta_africana
ENSPMGG00000019764	trmt1	90	66.376	ENSMFAG00000033143	TRMT1	87	66.376	Macaca_fascicularis
ENSPMGG00000019764	trmt1	90	62.982	ENSMMUG00000001167	TRMT1	87	63.158	Macaca_mulatta
ENSPMGG00000019764	trmt1	90	66.028	ENSMNEG00000037867	TRMT1	91	64.179	Macaca_nemestrina
ENSPMGG00000019764	trmt1	94	64.345	ENSMLEG00000016142	TRMT1	91	64.345	Mandrillus_leucophaeus
ENSPMGG00000019764	trmt1	96	81.636	ENSMAMG00000004357	trmt1	90	81.469	Mastacembelus_armatus
ENSPMGG00000019764	trmt1	96	79.768	ENSMZEG00005014510	trmt1	91	79.602	Maylandia_zebra
ENSPMGG00000019764	trmt1	94	62.292	ENSMAUG00000011134	Trmt1	90	62.000	Mesocricetus_auratus
ENSPMGG00000019764	trmt1	95	64.570	ENSMICG00000000793	TRMT1	91	64.404	Microcebus_murinus
ENSPMGG00000019764	trmt1	90	64.572	ENSMOCG00000015895	Trmt1	87	64.747	Microtus_ochrogaster
ENSPMGG00000019764	trmt1	97	78.333	ENSMMOG00000011097	trmt1	98	78.167	Mola_mola
ENSPMGG00000019764	trmt1	95	65.261	ENSMODG00000011619	TRMT1	97	65.261	Monodelphis_domestica
ENSPMGG00000019764	trmt1	90	66.025	MGP_CAROLIEiJ_G0031304	Trmt1	87	66.140	Mus_caroli
ENSPMGG00000019764	trmt1	96	63.383	ENSMUSG00000001909	Trmt1	92	63.383	Mus_musculus
ENSPMGG00000019764	trmt1	96	63.218	MGP_SPRETEiJ_G0032422	Trmt1	92	63.218	Mus_spretus
ENSPMGG00000019764	trmt1	90	66.434	ENSMPUG00000004210	TRMT1	82	66.434	Mustela_putorius_furo
ENSPMGG00000019764	trmt1	94	64.345	ENSMLUG00000012809	TRMT1	90	64.559	Myotis_lucifugus
ENSPMGG00000019764	trmt1	96	62.418	ENSNGAG00000022486	Trmt1	92	62.255	Nannospalax_galili
ENSPMGG00000019764	trmt1	80	84.706	ENSNBRG00000024376	trmt1	87	84.706	Neolamprologus_brichardi
ENSPMGG00000019764	trmt1	71	66.667	ENSNLEG00000013019	-	84	66.667	Nomascus_leucogenys
ENSPMGG00000019764	trmt1	92	66.492	ENSMEUG00000013756	TRMT1	98	66.318	Notamacropus_eugenii
ENSPMGG00000019764	trmt1	77	67.554	ENSOPRG00000009471	-	75	67.554	Ochotona_princeps
ENSPMGG00000019764	trmt1	90	66.140	ENSODEG00000010323	TRMT1	87	66.140	Octodon_degus
ENSPMGG00000019764	trmt1	96	83.860	ENSONIG00000000400	trmt1	94	84.041	Oreochromis_niloticus
ENSPMGG00000019764	trmt1	81	64.672	ENSOCUG00000021934	TRMT1	97	64.990	Oryctolagus_cuniculus
ENSPMGG00000019764	trmt1	94	75.413	ENSORLG00000020074	trmt1	96	75.413	Oryzias_latipes
ENSPMGG00000019764	trmt1	94	79.534	ENSORLG00020007561	trmt1	90	81.690	Oryzias_latipes_hni
ENSPMGG00000019764	trmt1	94	79.368	ENSORLG00015006547	trmt1	92	79.368	Oryzias_latipes_hsok
ENSPMGG00000019764	trmt1	96	79.672	ENSOMEG00000019343	trmt1	94	79.672	Oryzias_melastigma
ENSPMGG00000019764	trmt1	95	63.591	ENSOGAG00000025576	TRMT1	95	63.427	Otolemur_garnettii
ENSPMGG00000019764	trmt1	94	51.901	ENSOARG00000009397	TRMT1	85	52.397	Ovis_aries
ENSPMGG00000019764	trmt1	94	57.309	ENSPPRG00000012117	TRMT1	92	57.309	Panthera_pardus
ENSPMGG00000019764	trmt1	72	63.608	ENSPTIG00000008833	TRMT1	88	63.608	Panthera_tigris_altaica
ENSPMGG00000019764	trmt1	97	63.533	ENSPTRG00000010557	TRMT1	87	66.087	Pan_troglodytes
ENSPMGG00000019764	trmt1	88	47.803	ENSPTRG00000050421	-	90	47.803	Pan_troglodytes
ENSPMGG00000019764	trmt1	90	66.376	ENSPANG00000009247	TRMT1	87	66.376	Papio_anubis
ENSPMGG00000019764	trmt1	87	48.029	ENSPANG00000034058	-	91	47.487	Papio_anubis
ENSPMGG00000019764	trmt1	95	75.000	ENSPKIG00000005309	trmt1	90	74.833	Paramormyrops_kingsleyae
ENSPMGG00000019764	trmt1	88	58.559	ENSPSIG00000008762	TRMT1	80	58.484	Pelodiscus_sinensis
ENSPMGG00000019764	trmt1	90	65.043	ENSPEMG00000016247	Trmt1	86	64.921	Peromyscus_maniculatus_bairdii
ENSPMGG00000019764	trmt1	91	62.522	ENSPMAG00000004329	trmt1	90	61.888	Petromyzon_marinus
ENSPMGG00000019764	trmt1	91	67.426	ENSPCIG00000019273	TRMT1	89	67.426	Phascolarctos_cinereus
ENSPMGG00000019764	trmt1	98	80.164	ENSPFOG00000008527	trmt1	89	84.480	Poecilia_formosa
ENSPMGG00000019764	trmt1	98	79.572	ENSPLAG00000018788	trmt1	89	85.385	Poecilia_latipinna
ENSPMGG00000019764	trmt1	98	80.395	ENSPMEG00000013120	trmt1	88	84.752	Poecilia_mexicana
ENSPMGG00000019764	trmt1	94	81.601	ENSPREG00000000211	trmt1	89	81.431	Poecilia_reticulata
ENSPMGG00000019764	trmt1	90	66.087	ENSPPYG00000009622	TRMT1	87	66.028	Pongo_abelii
ENSPMGG00000019764	trmt1	94	59.228	ENSPCAG00000003698	TRMT1	91	59.228	Procavia_capensis
ENSPMGG00000019764	trmt1	96	63.622	ENSPCOG00000008653	TRMT1	93	63.622	Propithecus_coquereli
ENSPMGG00000019764	trmt1	90	65.157	ENSPVAG00000015076	TRMT1	87	65.157	Pteropus_vampyrus
ENSPMGG00000019764	trmt1	100	75.801	ENSPNYG00000013960	trmt1	98	76.974	Pundamilia_nyererei
ENSPMGG00000019764	trmt1	98	67.101	ENSPNAG00000024859	trmt1	92	73.109	Pygocentrus_nattereri
ENSPMGG00000019764	trmt1	90	65.088	ENSRNOG00000002914	Trmt1	89	65.088	Rattus_norvegicus
ENSPMGG00000019764	trmt1	92	47.959	ENSRBIG00000037505	-	92	48.299	Rhinopithecus_bieti
ENSPMGG00000019764	trmt1	90	66.492	ENSRBIG00000038324	TRMT1	87	66.492	Rhinopithecus_bieti
ENSPMGG00000019764	trmt1	92	47.449	ENSRROG00000031847	-	94	45.156	Rhinopithecus_roxellana
ENSPMGG00000019764	trmt1	90	66.667	ENSRROG00000028599	TRMT1	87	66.667	Rhinopithecus_roxellana
ENSPMGG00000019764	trmt1	81	37.879	YDR120C	-	92	37.879	Saccharomyces_cerevisiae
ENSPMGG00000019764	trmt1	90	63.415	ENSSBOG00000028861	TRMT1	92	63.415	Saimiri_boliviensis_boliviensis
ENSPMGG00000019764	trmt1	91	68.301	ENSSHAG00000014381	TRMT1	97	67.233	Sarcophilus_harrisii
ENSPMGG00000019764	trmt1	91	77.504	ENSSFOG00015004139	trmt1	89	74.916	Scleropages_formosus
ENSPMGG00000019764	trmt1	91	82.783	ENSSMAG00000021136	trmt1	89	80.936	Scophthalmus_maximus
ENSPMGG00000019764	trmt1	92	83.333	ENSSDUG00000012740	trmt1	86	83.160	Seriola_dumerili
ENSPMGG00000019764	trmt1	92	83.507	ENSSLDG00000005971	trmt1	86	83.333	Seriola_lalandi_dorsalis
ENSPMGG00000019764	trmt1	85	62.615	ENSSARG00000005138	TRMT1	96	62.615	Sorex_araneus
ENSPMGG00000019764	trmt1	90	52.920	ENSSPUG00000001084	TRMT1	89	53.451	Sphenodon_punctatus
ENSPMGG00000019764	trmt1	95	79.293	ENSSPAG00000007153	trmt1	98	79.457	Stegastes_partitus
ENSPMGG00000019764	trmt1	95	63.621	ENSSSCG00000013744	TRMT1	95	63.455	Sus_scrofa
ENSPMGG00000019764	trmt1	90	76.708	ENSTRUG00000010700	trmt1	86	76.883	Takifugu_rubripes
ENSPMGG00000019764	trmt1	91	83.333	ENSTNIG00000018808	trmt1	100	82.056	Tetraodon_nigroviridis
ENSPMGG00000019764	trmt1	90	62.544	ENSTTRG00000006379	TRMT1	87	62.544	Tursiops_truncatus
ENSPMGG00000019764	trmt1	90	65.385	ENSUAMG00000022911	TRMT1	93	63.240	Ursus_americanus
ENSPMGG00000019764	trmt1	90	65.035	ENSUMAG00000006027	TRMT1	90	65.035	Ursus_maritimus
ENSPMGG00000019764	trmt1	90	66.028	ENSVVUG00000024177	TRMT1	87	66.028	Vulpes_vulpes
ENSPMGG00000019764	trmt1	73	70.652	ENSXETG00000033863	TRMT1	92	70.435	Xenopus_tropicalis
ENSPMGG00000019764	trmt1	94	81.575	ENSXCOG00000015733	trmt1	94	81.333	Xiphophorus_couchianus
ENSPMGG00000019764	trmt1	90	84.014	ENSXMAG00000013823	trmt1	98	84.014	Xiphophorus_maculatus