EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000019850 (Gene tree)
Gene ID: -
Gene Symbol: chd8
Alias: -
Full Name: chromodomain helicase DNA binding protein 8
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 6715 bases
Position: chrKN462587.1:158440-165154
Accession: ZDB-GENE-030131-6320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000024548	ResIII	PF04851.15	1e-07	1	1
ENSPMGP00000024557	ResIII	PF04851.15	1e-07	1	1
ENSPMGP00000024559	ResIII	PF04851.15	1.2e-07	1	1
ENSPMGP00000024553	ResIII	PF04851.15	1.2e-07	1	1
ENSPMGP00000024611	ResIII	PF04851.15	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000026222	-	636	-	ENSPMGP00000024611	211 (aa)	-	-
ENSPMGT00000026158	-	2043	-	ENSPMGP00000024553	680 (aa)	-	-
ENSPMGT00000026212	-	306	-	ENSPMGP00000024603	101 (aa)	-	-
ENSPMGT00000026163	-	2064	-	ENSPMGP00000024557	687 (aa)	-	-
ENSPMGT00000026165	-	2037	-	ENSPMGP00000024559	678 (aa)	-	-
ENSPMGT00000026209	-	960	-	ENSPMGP00000024600	319 (aa)	-	-
ENSPMGT00000026153	-	2682	-	ENSPMGP00000024548	893 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000019850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000019850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000019850	chd8	99	77.273	ENSG00000100888	CHD8	86	84.091	Homo_sapiens
ENSPMGG00000019850	chd8	99	77.273	ENSCAFG00020014565	CHD8	54	78.209	Canis_lupus_dingo
ENSPMGG00000019850	chd8	81	63.465	ENSCSAVG00000005900	-	87	58.369	Ciona_savignyi
ENSPMGG00000019850	chd8	80	63.402	ENSCVAG00000020866	-	84	64.935	Cyprinodon_variegatus
ENSPMGG00000019850	chd8	80	64.433	ENSDORG00000026018	-	88	62.130	Dipodomys_ordii
ENSPMGG00000019850	chd8	80	79.381	ENSFHEG00000017596	-	79	80.310	Fundulus_heteroclitus
ENSPMGG00000019850	chd8	55	61.268	ENSFHEG00000009582	-	50	57.708	Fundulus_heteroclitus
ENSPMGG00000019850	chd8	77	75.132	ENSGALG00000036191	-	85	72.421	Gallus_gallus
ENSPMGG00000019850	chd8	82	82.190	ENSGAFG00000015210	-	97	86.818	Gambusia_affinis
ENSPMGG00000019850	chd8	77	64.550	ENSHCOG00000012108	-	77	64.912	Hippocampus_comes
ENSPMGG00000019850	chd8	80	64.433	ENSJJAG00000010052	-	88	61.933	Jaculus_jaculus
ENSPMGG00000019850	chd8	80	64.433	ENSNGAG00000017135	-	88	62.130	Nannospalax_galili
ENSPMGG00000019850	chd8	80	64.433	ENSODEG00000015358	-	88	61.538	Octodon_degus
ENSPMGG00000019850	chd8	73	74.586	ENSOANG00000013276	-	100	78.012	Ornithorhynchus_anatinus
ENSPMGG00000019850	chd8	80	63.918	ENSPMEG00000000676	-	78	67.606	Poecilia_mexicana
ENSPMGG00000019850	chd8	91	62.136	ENSPREG00000014744	chd7	96	65.323	Poecilia_reticulata
ENSPMGG00000019850	chd8	77	66.129	ENSSMAG00000001097	-	97	71.226	Scophthalmus_maximus
ENSPMGG00000019850	chd8	77	64.021	ENSTRUG00000007574	-	56	65.511	Takifugu_rubripes
ENSPMGG00000019850	chd8	98	84.925	ENSTRUG00000006682	chd8	97	69.286	Takifugu_rubripes
ENSPMGG00000019850	chd8	99	75.714	ENSUAMG00000004198	CHD8	63	78.064	Ursus_americanus
ENSPMGG00000019850	chd8	99	76.058	ENSXETG00000017194	CHD8	72	77.794	Xenopus_tropicalis