EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000020125 (Gene tree)
Gene ID: -
Gene Symbol: srsf5a
Alias: -
Full Name: serine/arginine-rich splicing factor 5a
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 3651 bases
Position: chrKN461605.1:756541-760191
Accession: ZDB-GENE-030131-7336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000024880	RRM_1	PF00076.22	1.6e-31	1	2
ENSPMGP00000024880	RRM_1	PF00076.22	1.6e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000026507	-	1005	-	ENSPMGP00000024880	334 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000020125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000020125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000020125	srsf5a	55	79.348	ENSAPOG00000017395	srsf5a	92	67.376	Acanthochromis_polyacanthus
ENSPMGG00000020125	srsf5a	72	68.313	ENSACIG00000011892	srsf5a	98	76.471	Amphilophus_citrinellus
ENSPMGG00000020125	srsf5a	55	83.607	ENSAOCG00000014967	srsf5a	94	74.737	Amphiprion_ocellaris
ENSPMGG00000020125	srsf5a	55	83.607	ENSAPEG00000009297	srsf5a	82	67.755	Amphiprion_percula
ENSPMGG00000020125	srsf5a	87	65.541	ENSATEG00000000198	srsf5a	93	69.759	Anabas_testudineus
ENSPMGG00000020125	srsf5a	55	75.135	ENSAPLG00000002469	-	70	72.193	Anas_platyrhynchos
ENSPMGG00000020125	srsf5a	55	73.770	ENSACAG00000029015	-	69	73.514	Anolis_carolinensis
ENSPMGG00000020125	srsf5a	55	79.581	ENSACLG00000027166	srsf5a	82	66.403	Astatotilapia_calliptera
ENSPMGG00000020125	srsf5a	55	83.243	ENSAMXG00000030476	srsf5a	68	82.888	Astyanax_mexicanus
ENSPMGG00000020125	srsf5a	70	65.678	ENSCPBG00000021518	-	71	76.882	Chrysemys_picta_bellii
ENSPMGG00000020125	srsf5a	55	53.000	ENSCSAVG00000011376	-	78	56.633	Ciona_savignyi
ENSPMGG00000020125	srsf5a	72	69.721	ENSCSEG00000008109	srsf5a	79	65.882	Cynoglossus_semilaevis
ENSPMGG00000020125	srsf5a	54	72.340	ENSCVAG00000016982	srsf5a	96	69.173	Cyprinodon_variegatus
ENSPMGG00000020125	srsf5a	55	79.058	ENSDARG00000029818	srsf5a	100	75.940	Danio_rerio
ENSPMGG00000020125	srsf5a	55	76.166	ENSELUG00000020439	srsf5a	63	76.410	Esox_lucius
ENSPMGG00000020125	srsf5a	66	68.018	ENSFALG00000005098	-	64	73.913	Ficedula_albicollis
ENSPMGG00000020125	srsf5a	73	58.015	ENSFHEG00000003955	srsf5a	95	66.901	Fundulus_heteroclitus
ENSPMGG00000020125	srsf5a	55	79.781	ENSGMOG00000000869	srsf5a	95	80.000	Gadus_morhua
ENSPMGG00000020125	srsf5a	66	66.968	ENSGALG00000033259	SRSF5A	63	74.863	Gallus_gallus
ENSPMGG00000020125	srsf5a	73	58.367	ENSGAFG00000018237	srsf5a	75	58.367	Gambusia_affinis
ENSPMGG00000020125	srsf5a	55	80.874	ENSGACG00000011761	srsf5a	71	81.622	Gasterosteus_aculeatus
ENSPMGG00000020125	srsf5a	70	65.678	ENSGAGG00000007312	-	71	76.882	Gopherus_agassizii
ENSPMGG00000020125	srsf5a	55	80.000	ENSHBUG00000014048	srsf5a	82	66.667	Haplochromis_burtoni
ENSPMGG00000020125	srsf5a	55	81.183	ENSHCOG00000017557	srsf5a	62	82.105	Hippocampus_comes
ENSPMGG00000020125	srsf5a	55	76.923	ENSIPUG00000003439	srsf5a	69	79.167	Ictalurus_punctatus
ENSPMGG00000020125	srsf5a	55	76.596	ENSKMAG00000014937	srsf5a	59	76.684	Kryptolebias_marmoratus
ENSPMGG00000020125	srsf5a	71	66.532	ENSLBEG00000017153	srsf5a	74	78.173	Labrus_bergylta
ENSPMGG00000020125	srsf5a	55	80.328	ENSLACG00000017874	-	71	80.000	Latimeria_chalumnae
ENSPMGG00000020125	srsf5a	55	80.000	ENSLOCG00000014075	srsf5a	93	56.849	Lepisosteus_oculatus
ENSPMGG00000020125	srsf5a	55	85.792	ENSMAMG00000000192	srsf5a	84	68.571	Mastacembelus_armatus
ENSPMGG00000020125	srsf5a	55	80.000	ENSMZEG00005010485	srsf5a	82	66.667	Maylandia_zebra
ENSPMGG00000020125	srsf5a	59	73.604	ENSMGAG00000011888	-	96	74.545	Meleagris_gallopavo
ENSPMGG00000020125	srsf5a	55	81.421	ENSMMOG00000009793	srsf5a	62	82.258	Mola_mola
ENSPMGG00000020125	srsf5a	72	68.595	ENSMALG00000021194	srsf5a	92	61.754	Monopterus_albus
ENSPMGG00000020125	srsf5a	55	80.423	ENSNBRG00000000771	srsf5a	82	66.932	Neolamprologus_brichardi
ENSPMGG00000020125	srsf5a	55	80.423	ENSONIG00000019583	srsf5a	82	66.932	Oreochromis_niloticus
ENSPMGG00000020125	srsf5a	55	80.328	ENSORLG00000009268	srsf5a	85	64.082	Oryzias_latipes
ENSPMGG00000020125	srsf5a	55	80.328	ENSORLG00020003281	srsf5	85	64.082	Oryzias_latipes_hni
ENSPMGG00000020125	srsf5a	55	80.328	ENSORLG00015023075	srsf5	85	64.082	Oryzias_latipes_hsok
ENSPMGG00000020125	srsf5a	72	64.854	ENSOMEG00000000628	srsf5a	85	64.082	Oryzias_melastigma
ENSPMGG00000020125	srsf5a	83	61.837	ENSPKIG00000002054	srsf5a	69	78.947	Paramormyrops_kingsleyae
ENSPMGG00000020125	srsf5a	55	74.595	ENSPSIG00000008238	-	70	74.194	Pelodiscus_sinensis
ENSPMGG00000020125	srsf5a	73	60.000	ENSPFOG00000022993	srsf5a	80	61.569	Poecilia_formosa
ENSPMGG00000020125	srsf5a	73	59.843	ENSPLAG00000005508	srsf5a	79	61.417	Poecilia_latipinna
ENSPMGG00000020125	srsf5a	73	60.000	ENSPMEG00000016339	srsf5a	80	61.569	Poecilia_mexicana
ENSPMGG00000020125	srsf5a	78	59.559	ENSPREG00000018091	srsf5a	81	61.328	Poecilia_reticulata
ENSPMGG00000020125	srsf5a	55	80.000	ENSPNYG00000021245	srsf5a	82	66.667	Pundamilia_nyererei
ENSPMGG00000020125	srsf5a	55	81.183	ENSPNAG00000021333	srsf5a	66	80.978	Pygocentrus_nattereri
ENSPMGG00000020125	srsf5a	55	78.723	ENSSFOG00015008377	srsf5	67	78.421	Scleropages_formosus
ENSPMGG00000020125	srsf5a	55	76.000	ENSSMAG00000010899	srsf5a	66	75.743	Scophthalmus_maximus
ENSPMGG00000020125	srsf5a	55	83.060	ENSSDUG00000006103	srsf5a	93	71.777	Seriola_dumerili
ENSPMGG00000020125	srsf5a	55	83.607	ENSSLDG00000004146	srsf5a	81	67.755	Seriola_lalandi_dorsalis
ENSPMGG00000020125	srsf5a	55	71.585	ENSSPUG00000002052	-	69	71.351	Sphenodon_punctatus
ENSPMGG00000020125	srsf5a	55	83.607	ENSSPAG00000002821	srsf5a	93	73.333	Stegastes_partitus
ENSPMGG00000020125	srsf5a	55	74.457	ENSTGUG00000011492	-	69	73.118	Taeniopygia_guttata
ENSPMGG00000020125	srsf5a	55	77.083	ENSTRUG00000022908	srsf5a	83	63.780	Takifugu_rubripes
ENSPMGG00000020125	srsf5a	58	73.367	ENSXETG00000017937	srsf5a	73	76.316	Xenopus_tropicalis
ENSPMGG00000020125	srsf5a	73	62.800	ENSXCOG00000015338	srsf5a	62	73.684	Xiphophorus_couchianus
ENSPMGG00000020125	srsf5a	73	60.392	ENSXMAG00000012823	srsf5a	81	61.569	Xiphophorus_maculatus