EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000020230 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 19381 bases
Position: chrKN461138.1:706450-725830
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000025034	zf-met	PF12874.7	3e-27	1	4
ENSPMGP00000025034	zf-met	PF12874.7	3e-27	2	4
ENSPMGP00000025034	zf-met	PF12874.7	3e-27	3	4
ENSPMGP00000025034	zf-met	PF12874.7	3e-27	4	4
ENSPMGP00000025034	zf-C2H2_jaz	PF12171.8	2.8e-20	1	2
ENSPMGP00000025034	zf-C2H2_jaz	PF12171.8	2.8e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000026669	-	714	-	ENSPMGP00000025034	238 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000020230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000020230's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000020230	zgc:171482	100	84.100	ENSAPOG00000019970	zgc:171482	99	84.100	Acanthochromis_polyacanthus
ENSPMGG00000020230	zgc:171482	82	96.667	ENSACIG00000021512	zgc:171482	87	96.667	Amphilophus_citrinellus
ENSPMGG00000020230	zgc:171482	82	95.161	ENSAOCG00000000751	zgc:171482	91	95.161	Amphiprion_ocellaris
ENSPMGG00000020230	zgc:171482	82	95.161	ENSAPEG00000014154	zgc:171482	89	95.161	Amphiprion_percula
ENSPMGG00000020230	zgc:171482	100	85.774	ENSATEG00000001371	zgc:171482	99	85.774	Anabas_testudineus
ENSPMGG00000020230	zgc:171482	82	94.400	ENSACLG00000010511	zgc:171482	87	94.400	Astatotilapia_calliptera
ENSPMGG00000020230	zgc:171482	100	78.661	ENSAMXG00000002299	zgc:171482	93	88.710	Astyanax_mexicanus
ENSPMGG00000020230	zgc:171482	100	98.214	ENSCSEG00000006509	zgc:171482	99	98.214	Cynoglossus_semilaevis
ENSPMGG00000020230	zgc:171482	100	85.774	ENSCVAG00000013606	zgc:171482	99	85.774	Cyprinodon_variegatus
ENSPMGG00000020230	zgc:171482	100	82.917	ENSDARG00000074415	zgc:171482	99	89.583	Danio_rerio
ENSPMGG00000020230	zgc:171482	82	93.443	ENSELUG00000021817	zgc:171482	90	92.800	Esox_lucius
ENSPMGG00000020230	zgc:171482	83	60.606	ENSELUG00000017517	-	60	84.444	Esox_lucius
ENSPMGG00000020230	zgc:171482	100	82.845	ENSFHEG00000002233	zgc:171482	89	94.400	Fundulus_heteroclitus
ENSPMGG00000020230	zgc:171482	100	81.405	ENSGMOG00000010508	zgc:171482	99	81.405	Gadus_morhua
ENSPMGG00000020230	zgc:171482	100	96.667	ENSGAFG00000009398	zgc:171482	99	96.667	Gambusia_affinis
ENSPMGG00000020230	zgc:171482	100	87.448	ENSGACG00000007680	zgc:171482	99	87.448	Gasterosteus_aculeatus
ENSPMGG00000020230	zgc:171482	82	94.400	ENSHBUG00000023289	zgc:171482	94	94.400	Haplochromis_burtoni
ENSPMGG00000020230	zgc:171482	82	87.500	ENSHCOG00000018086	zgc:171482	93	87.500	Hippocampus_comes
ENSPMGG00000020230	zgc:171482	82	92.500	ENSIPUG00000000361	zgc:171482	86	92.500	Ictalurus_punctatus
ENSPMGG00000020230	zgc:171482	54	71.318	ENSIPUG00000000356	-	79	75.610	Ictalurus_punctatus
ENSPMGG00000020230	zgc:171482	100	83.128	ENSKMAG00000005077	zgc:171482	85	83.128	Kryptolebias_marmoratus
ENSPMGG00000020230	zgc:171482	82	92.126	ENSLBEG00000023823	zgc:171482	91	92.126	Labrus_bergylta
ENSPMGG00000020230	zgc:171482	100	79.916	ENSLOCG00000008863	zgc:171482	96	82.500	Lepisosteus_oculatus
ENSPMGG00000020230	zgc:171482	82	93.600	ENSMAMG00000001031	zgc:171482	79	93.600	Mastacembelus_armatus
ENSPMGG00000020230	zgc:171482	100	83.682	ENSMZEG00005027721	zgc:171482	99	83.682	Maylandia_zebra
ENSPMGG00000020230	zgc:171482	82	95.200	ENSMMOG00000010523	zgc:171482	95	95.200	Mola_mola
ENSPMGG00000020230	zgc:171482	100	86.192	ENSMALG00000017883	zgc:171482	99	87.866	Monopterus_albus
ENSPMGG00000020230	zgc:171482	82	98.261	ENSNBRG00000021035	zgc:171482	86	98.261	Neolamprologus_brichardi
ENSPMGG00000020230	zgc:171482	100	87.448	ENSONIG00000018365	zgc:171482	98	87.448	Oreochromis_niloticus
ENSPMGG00000020230	zgc:171482	100	84.519	ENSORLG00000007607	zgc:171482	99	84.519	Oryzias_latipes
ENSPMGG00000020230	zgc:171482	100	81.893	ENSORLG00020003563	zgc:171482	88	93.600	Oryzias_latipes_hni
ENSPMGG00000020230	zgc:171482	100	84.519	ENSORLG00015008552	zgc:171482	99	84.519	Oryzias_latipes_hsok
ENSPMGG00000020230	zgc:171482	93	96.000	ENSOMEG00000003526	zgc:171482	95	96.000	Oryzias_melastigma
ENSPMGG00000020230	zgc:171482	82	96.460	ENSPKIG00000015911	-	78	96.460	Paramormyrops_kingsleyae
ENSPMGG00000020230	zgc:171482	100	90.947	ENSPFOG00000001974	zgc:171482	96	90.947	Poecilia_formosa
ENSPMGG00000020230	zgc:171482	100	84.711	ENSPLAG00000003327	zgc:171482	99	84.711	Poecilia_latipinna
ENSPMGG00000020230	zgc:171482	100	79.835	ENSPMEG00000004988	zgc:171482	99	79.835	Poecilia_mexicana
ENSPMGG00000020230	zgc:171482	82	94.488	ENSPREG00000019241	zgc:171482	92	94.488	Poecilia_reticulata
ENSPMGG00000020230	zgc:171482	82	94.400	ENSPNYG00000007773	zgc:171482	87	94.400	Pundamilia_nyererei
ENSPMGG00000020230	zgc:171482	100	80.672	ENSPNAG00000007619	zgc:171482	97	85.294	Pygocentrus_nattereri
ENSPMGG00000020230	zgc:171482	82	80.282	ENSSFOG00015021238	zgc:171482	95	80.282	Scleropages_formosus
ENSPMGG00000020230	zgc:171482	82	90.265	ENSSFOG00015016149	zgc:171482	90	90.265	Scleropages_formosus
ENSPMGG00000020230	zgc:171482	82	95.200	ENSSMAG00000002715	zgc:171482	80	95.200	Scophthalmus_maximus
ENSPMGG00000020230	zgc:171482	82	94.444	ENSSDUG00000008773	zgc:171482	89	94.444	Seriola_dumerili
ENSPMGG00000020230	zgc:171482	82	94.444	ENSSLDG00000019510	zgc:171482	89	94.444	Seriola_lalandi_dorsalis
ENSPMGG00000020230	zgc:171482	82	95.161	ENSSPAG00000013724	zgc:171482	98	95.161	Stegastes_partitus
ENSPMGG00000020230	zgc:171482	87	97.368	ENSTRUG00000005705	zgc:171482	71	97.368	Takifugu_rubripes
ENSPMGG00000020230	zgc:171482	100	75.314	ENSTNIG00000008679	zgc:171482	99	75.314	Tetraodon_nigroviridis
ENSPMGG00000020230	zgc:171482	85	56.579	ENSXETG00000013525	zmat4	89	56.579	Xenopus_tropicalis
ENSPMGG00000020230	zgc:171482	100	85.950	ENSXMAG00000002641	zgc:171482	99	85.950	Xiphophorus_maculatus