EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000020709 (Gene tree)
Gene ID: -
Gene Symbol: lsm11
Alias: -
Full Name: LSM11%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 3143 bases
Position: chrKN462589.1:35159-38301
Accession: ZDB-GENE-050309-124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000025650	LSM	PF01423.22	7.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000027321	-	936	-	ENSPMGP00000025650	311 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000020709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000020709's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000020709	lsm11	50	39.614	ENSCPOG00000000906	LSM11	97	40.580	Cavia_porcellus
ENSPMGG00000020709	lsm11	57	39.301	ENSCLAG00000017067	LSM11	97	39.738	Chinchilla_lanigera
ENSPMGG00000020709	lsm11	54	34.320	ENSCING00000002109	-	84	34.320	Ciona_intestinalis
ENSPMGG00000020709	lsm11	85	32.759	ENSCSAVG00000011571	-	98	32.759	Ciona_savignyi
ENSPMGG00000020709	lsm11	50	40.670	ENSCGRG00000000197	Lsm11	94	40.670	Cricetulus_griseus_crigri
ENSPMGG00000020709	lsm11	100	62.102	ENSCSEG00000019951	lsm11	100	62.102	Cynoglossus_semilaevis
ENSPMGG00000020709	lsm11	100	58.599	ENSCVAG00000011703	lsm11	100	59.048	Cyprinodon_variegatus
ENSPMGG00000020709	lsm11	100	58.044	ENSMMOG00000009365	lsm11	100	56.575	Mola_mola
ENSPMGG00000020709	lsm11	52	47.126	ENSMLUG00000015930	LSM11	98	47.126	Myotis_lucifugus
ENSPMGG00000020709	lsm11	100	62.620	ENSPFOG00000000512	lsm11	98	62.620	Poecilia_formosa
ENSPMGG00000020709	lsm11	100	62.420	ENSPLAG00000019434	lsm11	100	62.420	Poecilia_latipinna
ENSPMGG00000020709	lsm11	100	63.208	ENSPREG00000019696	lsm11	89	63.208	Poecilia_reticulata
ENSPMGG00000020709	lsm11	50	41.627	ENSPCAG00000016360	LSM11	98	41.627	Procavia_capensis
ENSPMGG00000020709	lsm11	100	60.256	ENSXMAG00000008238	lsm11	100	61.218	Xiphophorus_maculatus