EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000021081 (Gene tree)
Gene ID: -
Gene Symbol: srl
Alias: -
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 2734 bases
Position: chrKN461272.1:195718-198451
Accession: ZDB-GENE-061110-91
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000026130	MMR_HSR1	PF01926.23	7.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000027828	-	1395	-	ENSPMGP00000026130	464 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000021081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000021081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000021081	srl	97	83.407	ENSG00000185739	SRL	99	84.419	Homo_sapiens
ENSPMGG00000021081	srl	99	93.013	ENSAPOG00000018093	srl	99	95.238	Acanthochromis_polyacanthus
ENSPMGG00000021081	srl	97	76.562	ENSAPOG00000012432	SRL	99	76.562	Acanthochromis_polyacanthus
ENSPMGG00000021081	srl	97	83.333	ENSAMEG00000010862	SRL	51	83.333	Ailuropoda_melanoleuca
ENSPMGG00000021081	srl	95	76.923	ENSACIG00000015419	SRL	98	76.923	Amphilophus_citrinellus
ENSPMGG00000021081	srl	97	94.457	ENSACIG00000015799	srl	99	94.457	Amphilophus_citrinellus
ENSPMGG00000021081	srl	99	75.599	ENSAOCG00000017049	SRL	99	75.817	Amphiprion_ocellaris
ENSPMGG00000021081	srl	94	95.622	ENSAOCG00000007574	srl	100	95.622	Amphiprion_ocellaris
ENSPMGG00000021081	srl	99	72.489	ENSAPEG00000006533	SRL	96	75.169	Amphiprion_percula
ENSPMGG00000021081	srl	99	93.231	ENSAPEG00000006911	srl	97	93.231	Amphiprion_percula
ENSPMGG00000021081	srl	96	95.506	ENSATEG00000024315	srl	97	93.450	Anabas_testudineus
ENSPMGG00000021081	srl	95	76.484	ENSATEG00000009643	SRL	52	76.703	Anabas_testudineus
ENSPMGG00000021081	srl	95	82.119	ENSACAG00000016380	SRL	87	79.245	Anolis_carolinensis
ENSPMGG00000021081	srl	98	74.464	ENSACLG00000024674	SRL	58	74.464	Astatotilapia_calliptera
ENSPMGG00000021081	srl	98	93.846	ENSACLG00000027685	srl	99	93.846	Astatotilapia_calliptera
ENSPMGG00000021081	srl	91	77.381	ENSAMXG00000038693	SRL	100	73.510	Astyanax_mexicanus
ENSPMGG00000021081	srl	97	91.574	ENSAMXG00000018789	srl	88	91.574	Astyanax_mexicanus
ENSPMGG00000021081	srl	97	83.592	ENSBTAG00000001078	SRL	57	83.592	Bos_taurus
ENSPMGG00000021081	srl	95	84.199	ENSCJAG00000019750	SRL	96	83.407	Callithrix_jacchus
ENSPMGG00000021081	srl	97	82.965	ENSCAFG00000019233	SRL	84	82.965	Canis_familiaris
ENSPMGG00000021081	srl	97	82.965	ENSCAFG00020025024	SRL	56	82.965	Canis_lupus_dingo
ENSPMGG00000021081	srl	97	83.592	ENSCHIG00000017927	SRL	56	83.592	Capra_hircus
ENSPMGG00000021081	srl	97	83.628	ENSTSYG00000007919	SRL	99	84.651	Carlito_syrichta
ENSPMGG00000021081	srl	97	82.781	ENSCPOG00000012643	SRL	96	82.781	Cavia_porcellus
ENSPMGG00000021081	srl	95	78.555	ENSCCAG00000032646	SRL	100	85.224	Cebus_capucinus
ENSPMGG00000021081	srl	97	83.407	ENSCATG00000032227	-	96	83.407	Cercocebus_atys
ENSPMGG00000021081	srl	97	82.561	ENSCLAG00000016242	SRL	96	82.561	Chinchilla_lanigera
ENSPMGG00000021081	srl	83	85.974	ENSCHOG00000001618	SRL	52	85.974	Choloepus_hoffmanni
ENSPMGG00000021081	srl	97	86.010	ENSCPBG00000026371	SRL	95	80.736	Chrysemys_picta_bellii
ENSPMGG00000021081	srl	93	59.165	ENSCING00000005231	-	96	59.165	Ciona_intestinalis
ENSPMGG00000021081	srl	97	83.407	ENSCANG00000035872	SRL	99	84.419	Colobus_angolensis_palliatus
ENSPMGG00000021081	srl	97	83.628	ENSCGRG00001016630	Srl	96	83.444	Cricetulus_griseus_chok1gshd
ENSPMGG00000021081	srl	97	83.628	ENSCGRG00000005458	Srl	96	83.444	Cricetulus_griseus_crigri
ENSPMGG00000021081	srl	98	74.179	ENSCSEG00000011866	SRL	92	74.398	Cynoglossus_semilaevis
ENSPMGG00000021081	srl	99	93.231	ENSCSEG00000016151	srl	97	94.053	Cynoglossus_semilaevis
ENSPMGG00000021081	srl	95	95.701	ENSCVAG00000003513	srl	96	95.701	Cyprinodon_variegatus
ENSPMGG00000021081	srl	98	75.647	ENSCVAG00000022465	SRL	61	75.647	Cyprinodon_variegatus
ENSPMGG00000021081	srl	99	90.476	ENSDARG00000104587	srl	98	90.476	Danio_rerio
ENSPMGG00000021081	srl	82	78.385	ENSDARG00000112959	CABZ01072309.1	100	78.385	Danio_rerio
ENSPMGG00000021081	srl	97	83.778	ENSDNOG00000011643	SRL	54	83.297	Dasypus_novemcinctus
ENSPMGG00000021081	srl	97	82.781	ENSDORG00000014807	Srl	98	81.385	Dipodomys_ordii
ENSPMGG00000021081	srl	80	65.508	ENSEBUG00000015937	srl	94	65.508	Eptatretus_burgeri
ENSPMGG00000021081	srl	97	84.187	ENSEASG00005000942	SRL	54	84.035	Equus_asinus_asinus
ENSPMGG00000021081	srl	99	82.684	ENSECAG00000024219	SRL	98	82.684	Equus_caballus
ENSPMGG00000021081	srl	97	86.938	ENSELUG00000015616	srl	96	86.938	Esox_lucius
ENSPMGG00000021081	srl	95	83.521	ENSFCAG00000022075	SRL	98	81.641	Felis_catus
ENSPMGG00000021081	srl	98	82.198	ENSFALG00000004328	SRL	65	82.198	Ficedula_albicollis
ENSPMGG00000021081	srl	97	83.223	ENSFDAG00000006199	SRL	97	82.353	Fukomys_damarensis
ENSPMGG00000021081	srl	95	95.249	ENSFHEG00000011239	srl	95	95.249	Fundulus_heteroclitus
ENSPMGG00000021081	srl	97	76.116	ENSFHEG00000011854	SRL	99	76.339	Fundulus_heteroclitus
ENSPMGG00000021081	srl	95	90.728	ENSGMOG00000014954	srl	99	90.728	Gadus_morhua
ENSPMGG00000021081	srl	97	82.444	ENSGALG00000038884	SRL	95	82.444	Gallus_gallus
ENSPMGG00000021081	srl	95	78.733	ENSGAFG00000016984	SRL	98	78.733	Gambusia_affinis
ENSPMGG00000021081	srl	95	95.475	ENSGAFG00000000010	srl	96	95.475	Gambusia_affinis
ENSPMGG00000021081	srl	95	91.611	ENSGACG00000011332	srl	99	91.611	Gasterosteus_aculeatus
ENSPMGG00000021081	srl	97	83.407	ENSGGOG00000011312	-	96	83.407	Gorilla_gorilla
ENSPMGG00000021081	srl	98	93.846	ENSHBUG00000007581	srl	99	93.846	Haplochromis_burtoni
ENSPMGG00000021081	srl	97	75.000	ENSHBUG00000015710	SRL	58	75.000	Haplochromis_burtoni
ENSPMGG00000021081	srl	97	83.444	ENSHGLG00000015271	SRL	96	83.444	Heterocephalus_glaber_female
ENSPMGG00000021081	srl	97	83.444	ENSHGLG00100019378	SRL	96	83.444	Heterocephalus_glaber_male
ENSPMGG00000021081	srl	99	92.795	ENSHCOG00000008687	srl	99	94.831	Hippocampus_comes
ENSPMGG00000021081	srl	98	72.688	ENSHCOG00000001012	SRL	50	74.229	Hippocampus_comes
ENSPMGG00000021081	srl	94	69.954	ENSIPUG00000011609	SRL	95	69.954	Ictalurus_punctatus
ENSPMGG00000021081	srl	98	90.529	ENSIPUG00000012513	srl	97	90.529	Ictalurus_punctatus
ENSPMGG00000021081	srl	97	83.444	ENSSTOG00000021151	-	96	83.444	Ictidomys_tridecemlineatus
ENSPMGG00000021081	srl	97	83.444	ENSJJAG00000016400	Srl	96	83.444	Jaculus_jaculus
ENSPMGG00000021081	srl	95	93.213	ENSKMAG00000014115	srl	93	95.249	Kryptolebias_marmoratus
ENSPMGG00000021081	srl	95	77.098	ENSKMAG00000019537	SRL	100	77.098	Kryptolebias_marmoratus
ENSPMGG00000021081	srl	99	92.358	ENSLBEG00000026643	srl	97	92.358	Labrus_bergylta
ENSPMGG00000021081	srl	97	75.442	ENSLBEG00000013811	SRL	97	75.664	Labrus_bergylta
ENSPMGG00000021081	srl	97	84.922	ENSLACG00000002825	SRL	99	84.922	Latimeria_chalumnae
ENSPMGG00000021081	srl	97	90.687	ENSLOCG00000002644	srl	96	90.687	Lepisosteus_oculatus
ENSPMGG00000021081	srl	98	82.857	ENSLAFG00000006329	SRL	52	82.857	Loxodonta_africana
ENSPMGG00000021081	srl	93	84.419	ENSMFAG00000037383	SRL	99	84.419	Macaca_fascicularis
ENSPMGG00000021081	srl	97	83.556	ENSMNEG00000019236	-	95	83.556	Macaca_nemestrina
ENSPMGG00000021081	srl	97	76.327	ENSMLEG00000032156	SRL	95	76.327	Mandrillus_leucophaeus
ENSPMGG00000021081	srl	95	75.991	ENSMAMG00000013756	SRL	53	75.991	Mastacembelus_armatus
ENSPMGG00000021081	srl	95	95.475	ENSMAMG00000023322	srl	97	93.435	Mastacembelus_armatus
ENSPMGG00000021081	srl	97	74.784	ENSMZEG00005004010	SRL	58	74.784	Maylandia_zebra
ENSPMGG00000021081	srl	98	93.846	ENSMZEG00005004548	srl	99	93.846	Maylandia_zebra
ENSPMGG00000021081	srl	97	82.444	ENSMGAG00000009342	SRL	95	84.800	Meleagris_gallopavo
ENSPMGG00000021081	srl	97	83.186	ENSMICG00000032307	SRL	96	83.186	Microcebus_murinus
ENSPMGG00000021081	srl	99	81.602	ENSMOCG00000008208	Srl	98	81.602	Microtus_ochrogaster
ENSPMGG00000021081	srl	97	93.764	ENSMMOG00000013970	srl	99	93.764	Mola_mola
ENSPMGG00000021081	srl	95	74.725	ENSMMOG00000021572	SRL	99	74.725	Mola_mola
ENSPMGG00000021081	srl	97	83.556	ENSMODG00000016380	-	51	83.556	Monodelphis_domestica
ENSPMGG00000021081	srl	95	94.344	ENSMALG00000005039	srl	98	94.344	Monopterus_albus
ENSPMGG00000021081	srl	90	77.327	ENSMALG00000000670	SRL	98	77.327	Monopterus_albus
ENSPMGG00000021081	srl	99	82.391	MGP_CAROLIEiJ_G0020400	Srl	96	83.444	Mus_caroli
ENSPMGG00000021081	srl	99	82.391	ENSMUSG00000022519	Srl	96	83.444	Mus_musculus
ENSPMGG00000021081	srl	95	84.199	MGP_PahariEiJ_G0016108	Srl	50	82.174	Mus_pahari
ENSPMGG00000021081	srl	99	82.391	MGP_SPRETEiJ_G0021294	Srl	96	83.444	Mus_spretus
ENSPMGG00000021081	srl	98	82.599	ENSMPUG00000015025	SRL	55	82.599	Mustela_putorius_furo
ENSPMGG00000021081	srl	97	83.628	ENSMLUG00000030733	SRL	57	83.628	Myotis_lucifugus
ENSPMGG00000021081	srl	97	83.223	ENSNGAG00000019741	Srl	96	83.223	Nannospalax_galili
ENSPMGG00000021081	srl	97	74.353	ENSNBRG00000002422	SRL	58	74.353	Neolamprologus_brichardi
ENSPMGG00000021081	srl	97	94.678	ENSNBRG00000023775	srl	96	94.678	Neolamprologus_brichardi
ENSPMGG00000021081	srl	97	77.483	ENSNLEG00000029051	SRL	95	77.483	Nomascus_leucogenys
ENSPMGG00000021081	srl	97	77.212	ENSOPRG00000000477	-	53	77.212	Ochotona_princeps
ENSPMGG00000021081	srl	97	82.340	ENSODEG00000013256	SRL	96	82.340	Octodon_degus
ENSPMGG00000021081	srl	99	93.450	ENSONIG00000005192	srl	97	93.450	Oreochromis_niloticus
ENSPMGG00000021081	srl	97	83.186	ENSOCUG00000025140	SRL	50	83.186	Oryctolagus_cuniculus
ENSPMGG00000021081	srl	97	94.469	ENSORLG00000008291	srl	92	96.134	Oryzias_latipes
ENSPMGG00000021081	srl	96	74.497	ENSORLG00000015064	SRL	98	74.497	Oryzias_latipes
ENSPMGG00000021081	srl	97	94.469	ENSORLG00020019784	srl	83	93.450	Oryzias_latipes_hni
ENSPMGG00000021081	srl	96	74.720	ENSORLG00020018173	SRL	98	74.720	Oryzias_latipes_hni
ENSPMGG00000021081	srl	97	94.027	ENSORLG00015009342	srl	94	93.013	Oryzias_latipes_hsok
ENSPMGG00000021081	srl	96	74.720	ENSORLG00015019063	SRL	98	74.720	Oryzias_latipes_hsok
ENSPMGG00000021081	srl	97	94.027	ENSOMEG00000010006	srl	98	95.227	Oryzias_melastigma
ENSPMGG00000021081	srl	95	73.789	ENSOMEG00000005682	SRL	53	74.066	Oryzias_melastigma
ENSPMGG00000021081	srl	97	82.522	ENSOGAG00000029266	SRL	55	82.522	Otolemur_garnettii
ENSPMGG00000021081	srl	97	83.592	ENSOARG00000003074	SRL	57	83.592	Ovis_aries
ENSPMGG00000021081	srl	97	83.407	ENSPPAG00000024919	-	99	84.419	Pan_paniscus
ENSPMGG00000021081	srl	95	83.521	ENSPPRG00000010274	SRL	98	85.308	Panthera_pardus
ENSPMGG00000021081	srl	95	83.521	ENSPTIG00000015162	SRL	98	85.308	Panthera_tigris_altaica
ENSPMGG00000021081	srl	97	83.407	ENSPTRG00000007712	SRL	99	84.419	Pan_troglodytes
ENSPMGG00000021081	srl	97	83.407	ENSPANG00000013804	SRL	97	83.407	Papio_anubis
ENSPMGG00000021081	srl	97	91.796	ENSPKIG00000006405	srl	95	91.796	Paramormyrops_kingsleyae
ENSPMGG00000021081	srl	99	77.948	ENSPKIG00000024974	SRL	91	77.948	Paramormyrops_kingsleyae
ENSPMGG00000021081	srl	97	82.667	ENSPSIG00000008586	SRL	50	82.667	Pelodiscus_sinensis
ENSPMGG00000021081	srl	95	76.417	ENSPMGG00000023505	-	99	76.417	Periophthalmus_magnuspinnatus
ENSPMGG00000021081	srl	97	83.002	ENSPEMG00000015842	Srl	96	83.002	Peromyscus_maniculatus_bairdii
ENSPMGG00000021081	srl	91	67.661	ENSPMAG00000004786	srl	99	67.661	Petromyzon_marinus
ENSPMGG00000021081	srl	98	82.895	ENSPCIG00000012128	SRL	99	82.895	Phascolarctos_cinereus
ENSPMGG00000021081	srl	95	92.731	ENSPFOG00000011408	srl	93	92.715	Poecilia_formosa
ENSPMGG00000021081	srl	95	77.376	ENSPLAG00000002932	SRL	98	77.376	Poecilia_latipinna
ENSPMGG00000021081	srl	95	95.249	ENSPLAG00000008017	srl	96	95.249	Poecilia_latipinna
ENSPMGG00000021081	srl	95	75.824	ENSPMEG00000005890	SRL	59	75.385	Poecilia_mexicana
ENSPMGG00000021081	srl	95	95.249	ENSPMEG00000006745	srl	96	95.249	Poecilia_mexicana
ENSPMGG00000021081	srl	97	77.283	ENSPREG00000000315	SRL	100	77.283	Poecilia_reticulata
ENSPMGG00000021081	srl	95	95.475	ENSPREG00000007751	srl	98	95.475	Poecilia_reticulata
ENSPMGG00000021081	srl	90	85.680	ENSPPYG00000007053	SRL	98	85.680	Pongo_abelii
ENSPMGG00000021081	srl	97	83.814	ENSPCAG00000003378	-	51	83.814	Procavia_capensis
ENSPMGG00000021081	srl	97	82.965	ENSPCOG00000023135	SRL	99	83.953	Propithecus_coquereli
ENSPMGG00000021081	srl	98	83.114	ENSPVAG00000006586	SRL	56	83.114	Pteropus_vampyrus
ENSPMGG00000021081	srl	98	93.846	ENSPNYG00000001200	srl	99	93.846	Pundamilia_nyererei
ENSPMGG00000021081	srl	97	74.784	ENSPNYG00000003423	SRL	58	74.784	Pundamilia_nyererei
ENSPMGG00000021081	srl	99	90.000	ENSPNAG00000023106	srl	98	90.000	Pygocentrus_nattereri
ENSPMGG00000021081	srl	95	75.737	ENSPNAG00000007361	-	91	75.737	Pygocentrus_nattereri
ENSPMGG00000021081	srl	97	83.186	ENSRNOG00000005269	Srl	50	83.186	Rattus_norvegicus
ENSPMGG00000021081	srl	97	83.407	ENSRBIG00000042358	SRL	50	83.407	Rhinopithecus_bieti
ENSPMGG00000021081	srl	95	84.199	ENSSBOG00000029273	SRL	96	83.407	Saimiri_boliviensis_boliviensis
ENSPMGG00000021081	srl	97	83.556	ENSSHAG00000011715	-	51	83.556	Sarcophilus_harrisii
ENSPMGG00000021081	srl	96	91.910	ENSSFOG00015009773	srl	99	89.417	Scleropages_formosus
ENSPMGG00000021081	srl	95	77.828	ENSSFOG00015021327	SRL	50	77.111	Scleropages_formosus
ENSPMGG00000021081	srl	97	94.209	ENSSMAG00000016274	srl	98	94.209	Scophthalmus_maximus
ENSPMGG00000021081	srl	95	75.824	ENSSMAG00000002232	SRL	50	75.824	Scophthalmus_maximus
ENSPMGG00000021081	srl	95	95.249	ENSSDUG00000010808	srl	97	95.249	Seriola_dumerili
ENSPMGG00000021081	srl	95	77.728	ENSSDUG00000009161	SRL	98	77.728	Seriola_dumerili
ENSPMGG00000021081	srl	95	77.462	ENSSLDG00000014601	SRL	99	78.022	Seriola_lalandi_dorsalis
ENSPMGG00000021081	srl	97	93.805	ENSSLDG00000022024	srl	97	94.209	Seriola_lalandi_dorsalis
ENSPMGG00000021081	srl	97	82.522	ENSSPUG00000016859	SRL	99	82.522	Sphenodon_punctatus
ENSPMGG00000021081	srl	97	94.457	ENSSPAG00000019105	srl	96	94.457	Stegastes_partitus
ENSPMGG00000021081	srl	95	78.458	ENSSPAG00000014254	SRL	98	78.458	Stegastes_partitus
ENSPMGG00000021081	srl	97	83.592	ENSSSCG00000007949	SRL	99	83.705	Sus_scrofa
ENSPMGG00000021081	srl	97	82.889	ENSTGUG00000003951	-	99	82.889	Taeniopygia_guttata
ENSPMGG00000021081	srl	78	86.740	ENSTGUG00000016121	-	100	86.740	Taeniopygia_guttata
ENSPMGG00000021081	srl	99	93.231	ENSTRUG00000006005	srl	97	93.231	Takifugu_rubripes
ENSPMGG00000021081	srl	90	77.566	ENSTRUG00000013310	SRL	55	77.566	Takifugu_rubripes
ENSPMGG00000021081	srl	97	93.805	ENSTNIG00000009739	srl	99	91.845	Tetraodon_nigroviridis
ENSPMGG00000021081	srl	98	82.675	ENSUAMG00000005701	SRL	57	82.675	Ursus_americanus
ENSPMGG00000021081	srl	98	82.675	ENSUMAG00000002574	SRL	56	82.675	Ursus_maritimus
ENSPMGG00000021081	srl	97	82.965	ENSVVUG00000016331	-	50	82.965	Vulpes_vulpes
ENSPMGG00000021081	srl	97	82.851	ENSXETG00000017313	srl	99	82.851	Xenopus_tropicalis
ENSPMGG00000021081	srl	95	78.507	ENSXCOG00000014584	SRL	98	78.507	Xiphophorus_couchianus
ENSPMGG00000021081	srl	91	95.487	ENSXCOG00000010424	srl	97	95.487	Xiphophorus_couchianus
ENSPMGG00000021081	srl	95	95.475	ENSXMAG00000004625	srl	90	95.475	Xiphophorus_maculatus
ENSPMGG00000021081	srl	95	76.044	ENSXMAG00000027598	SRL	62	76.044	Xiphophorus_maculatus