EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000021179 (Gene tree)
Gene ID: -
Gene Symbol: ddb1
Alias: -
Full Name: damage-specific DNA binding protein 1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 74599 bases
Position: chrKN461274.1:804259-878857
Accession: ZDB-GENE-040426-1272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000026251	CPSF_A	PF03178.15	7.2e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000027959	-	2946	-	ENSPMGP00000026251	981 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000021179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000021179's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000021179	ddb1	99	91.429	ENSG00000167986	DDB1	100	95.890	Homo_sapiens
ENSPMGG00000021179	ddb1	100	98.879	ENSAPOG00000005036	ddb1	100	98.879	Acanthochromis_polyacanthus
ENSPMGG00000021179	ddb1	99	91.531	ENSAMEG00000016518	DDB1	86	91.531	Ailuropoda_melanoleuca
ENSPMGG00000021179	ddb1	100	98.471	ENSACIG00000020624	ddb1	100	98.471	Amphilophus_citrinellus
ENSPMGG00000021179	ddb1	99	98.776	ENSAOCG00000003066	ddb1	86	98.776	Amphiprion_ocellaris
ENSPMGG00000021179	ddb1	99	98.776	ENSAPEG00000000092	ddb1	90	98.776	Amphiprion_percula
ENSPMGG00000021179	ddb1	99	99.082	ENSATEG00000020571	ddb1	100	93.489	Anabas_testudineus
ENSPMGG00000021179	ddb1	99	89.969	ENSAPLG00000007174	DDB1	85	89.969	Anas_platyrhynchos
ENSPMGG00000021179	ddb1	99	90.612	ENSACAG00000017758	DDB1	86	90.612	Anolis_carolinensis
ENSPMGG00000021179	ddb1	99	91.429	ENSANAG00000021878	DDB1	86	91.429	Aotus_nancymaae
ENSPMGG00000021179	ddb1	99	98.367	ENSACLG00000012401	ddb1	99	97.763	Astatotilapia_calliptera
ENSPMGG00000021179	ddb1	99	91.429	ENSBTAG00000021569	DDB1	80	91.429	Bos_taurus
ENSPMGG00000021179	ddb1	100	37.873	WBGene00010890	ddb-1	86	37.873	Caenorhabditis_elegans
ENSPMGG00000021179	ddb1	99	91.429	ENSCJAG00000019319	DDB1	86	91.429	Callithrix_jacchus
ENSPMGG00000021179	ddb1	99	91.531	ENSCAFG00000016264	DDB1	90	91.531	Canis_familiaris
ENSPMGG00000021179	ddb1	99	91.531	ENSCAFG00020012722	DDB1	90	91.531	Canis_lupus_dingo
ENSPMGG00000021179	ddb1	99	91.429	ENSCHIG00000014969	DDB1	86	91.429	Capra_hircus
ENSPMGG00000021179	ddb1	99	91.020	ENSTSYG00000008027	DDB1	86	91.020	Carlito_syrichta
ENSPMGG00000021179	ddb1	98	91.241	ENSCAPG00000010786	DDB1	86	91.241	Cavia_aperea
ENSPMGG00000021179	ddb1	99	91.224	ENSCPOG00000009956	DDB1	86	91.224	Cavia_porcellus
ENSPMGG00000021179	ddb1	99	91.429	ENSCCAG00000035883	DDB1	86	91.429	Cebus_capucinus
ENSPMGG00000021179	ddb1	99	89.113	ENSCATG00000044495	DDB1	86	89.113	Cercocebus_atys
ENSPMGG00000021179	ddb1	99	91.327	ENSCLAG00000004126	DDB1	86	91.327	Chinchilla_lanigera
ENSPMGG00000021179	ddb1	99	91.429	ENSCSAG00000006392	DDB1	86	91.429	Chlorocebus_sabaeus
ENSPMGG00000021179	ddb1	85	91.365	ENSCHOG00000011377	DDB1	74	91.365	Choloepus_hoffmanni
ENSPMGG00000021179	ddb1	99	90.918	ENSCPBG00000017728	DDB1	86	90.918	Chrysemys_picta_bellii
ENSPMGG00000021179	ddb1	99	61.794	ENSCING00000007437	-	86	61.794	Ciona_intestinalis
ENSPMGG00000021179	ddb1	93	61.514	ENSCSAVG00000004783	-	100	60.523	Ciona_savignyi
ENSPMGG00000021179	ddb1	99	91.429	ENSCANG00000019948	DDB1	86	91.429	Colobus_angolensis_palliatus
ENSPMGG00000021179	ddb1	99	91.531	ENSCGRG00001016599	Ddb1	90	90.423	Cricetulus_griseus_chok1gshd
ENSPMGG00000021179	ddb1	99	91.531	ENSCGRG00000013427	Ddb1	86	91.531	Cricetulus_griseus_crigri
ENSPMGG00000021179	ddb1	99	98.061	ENSCSEG00000012499	ddb1	100	96.461	Cynoglossus_semilaevis
ENSPMGG00000021179	ddb1	99	97.755	ENSCVAG00000019531	ddb1	91	97.755	Cyprinodon_variegatus
ENSPMGG00000021179	ddb1	99	91.845	ENSDARG00000074431	ddb1	86	91.845	Danio_rerio
ENSPMGG00000021179	ddb1	99	91.531	ENSDNOG00000014884	DDB1	89	91.531	Dasypus_novemcinctus
ENSPMGG00000021179	ddb1	81	94.545	ENSDORG00000000127	Ddb1	83	94.545	Dipodomys_ordii
ENSPMGG00000021179	ddb1	99	60.812	FBgn0260962	pic	86	60.812	Drosophila_melanogaster
ENSPMGG00000021179	ddb1	66	94.488	ENSETEG00000001053	-	57	94.488	Echinops_telfairi
ENSPMGG00000021179	ddb1	91	84.027	ENSEBUG00000014593	ddb1	97	84.027	Eptatretus_burgeri
ENSPMGG00000021179	ddb1	99	91.531	ENSEASG00005008184	DDB1	86	91.531	Equus_asinus_asinus
ENSPMGG00000021179	ddb1	99	91.531	ENSECAG00000012136	DDB1	86	91.531	Equus_caballus
ENSPMGG00000021179	ddb1	90	87.059	ENSEEUG00000003194	DDB1	78	87.059	Erinaceus_europaeus
ENSPMGG00000021179	ddb1	99	97.449	ENSELUG00000023868	ddb1	86	97.449	Esox_lucius
ENSPMGG00000021179	ddb1	99	91.531	ENSFCAG00000029716	DDB1	86	91.531	Felis_catus
ENSPMGG00000021179	ddb1	99	90.714	ENSFALG00000011981	DDB1	86	90.714	Ficedula_albicollis
ENSPMGG00000021179	ddb1	99	91.327	ENSFDAG00000005128	DDB1	86	91.327	Fukomys_damarensis
ENSPMGG00000021179	ddb1	89	98.947	ENSFHEG00000022133	ddb1	84	98.947	Fundulus_heteroclitus
ENSPMGG00000021179	ddb1	79	97.993	ENSGMOG00000019386	ddb1	80	97.993	Gadus_morhua
ENSPMGG00000021179	ddb1	99	90.918	ENSGALG00000042333	DDB1	86	90.918	Gallus_gallus
ENSPMGG00000021179	ddb1	99	98.265	ENSGAFG00000013142	ddb1	91	98.265	Gambusia_affinis
ENSPMGG00000021179	ddb1	99	98.469	ENSGACG00000017182	ddb1	90	98.469	Gasterosteus_aculeatus
ENSPMGG00000021179	ddb1	94	90.693	ENSGAGG00000014124	DDB1	85	90.693	Gopherus_agassizii
ENSPMGG00000021179	ddb1	99	91.429	ENSGGOG00000004052	DDB1	86	91.429	Gorilla_gorilla
ENSPMGG00000021179	ddb1	99	98.367	ENSHBUG00000008873	ddb1	86	98.367	Haplochromis_burtoni
ENSPMGG00000021179	ddb1	99	91.327	ENSHGLG00000018430	DDB1	86	91.327	Heterocephalus_glaber_female
ENSPMGG00000021179	ddb1	99	90.204	ENSHGLG00100014475	DDB1	86	90.204	Heterocephalus_glaber_male
ENSPMGG00000021179	ddb1	99	98.265	ENSHCOG00000018670	ddb1	90	98.265	Hippocampus_comes
ENSPMGG00000021179	ddb1	99	95.816	ENSIPUG00000005612	DDB1	89	95.816	Ictalurus_punctatus
ENSPMGG00000021179	ddb1	99	91.429	ENSSTOG00000007552	DDB1	86	91.429	Ictidomys_tridecemlineatus
ENSPMGG00000021179	ddb1	99	91.429	ENSJJAG00000017769	Ddb1	86	91.429	Jaculus_jaculus
ENSPMGG00000021179	ddb1	99	98.469	ENSKMAG00000002315	ddb1	91	98.469	Kryptolebias_marmoratus
ENSPMGG00000021179	ddb1	98	99.168	ENSLBEG00000017065	ddb1	99	99.168	Labrus_bergylta
ENSPMGG00000021179	ddb1	99	90.918	ENSLACG00000017611	DDB1	88	90.833	Latimeria_chalumnae
ENSPMGG00000021179	ddb1	91	86.877	ENSLOCG00000000012	ddb1	84	86.877	Lepisosteus_oculatus
ENSPMGG00000021179	ddb1	99	91.327	ENSLAFG00000011513	DDB1	86	91.327	Loxodonta_africana
ENSPMGG00000021179	ddb1	99	91.429	ENSMFAG00000042035	DDB1	86	91.429	Macaca_fascicularis
ENSPMGG00000021179	ddb1	99	91.429	ENSMMUG00000002691	DDB1	100	89.474	Macaca_mulatta
ENSPMGG00000021179	ddb1	99	91.429	ENSMNEG00000031559	DDB1	86	91.429	Macaca_nemestrina
ENSPMGG00000021179	ddb1	99	91.429	ENSMLEG00000044136	DDB1	89	89.718	Mandrillus_leucophaeus
ENSPMGG00000021179	ddb1	99	99.184	ENSMAMG00000014372	ddb1	86	99.184	Mastacembelus_armatus
ENSPMGG00000021179	ddb1	99	98.367	ENSMZEG00005013835	ddb1	86	98.367	Maylandia_zebra
ENSPMGG00000021179	ddb1	93	90.450	ENSMGAG00000004990	DDB1	85	90.450	Meleagris_gallopavo
ENSPMGG00000021179	ddb1	99	91.531	ENSMAUG00000012926	Ddb1	86	91.531	Mesocricetus_auratus
ENSPMGG00000021179	ddb1	99	91.633	ENSMICG00000013703	DDB1	86	91.633	Microcebus_murinus
ENSPMGG00000021179	ddb1	99	91.429	ENSMOCG00000020499	Ddb1	86	91.429	Microtus_ochrogaster
ENSPMGG00000021179	ddb1	100	99.083	ENSMMOG00000001758	ddb1	100	99.083	Mola_mola
ENSPMGG00000021179	ddb1	99	82.485	ENSMODG00000020353	DDB1	85	82.485	Monodelphis_domestica
ENSPMGG00000021179	ddb1	99	98.980	ENSMALG00000014071	ddb1	86	98.980	Monopterus_albus
ENSPMGG00000021179	ddb1	99	91.531	MGP_CAROLIEiJ_G0022695	Ddb1	86	91.531	Mus_caroli
ENSPMGG00000021179	ddb1	99	91.633	ENSMUSG00000024740	Ddb1	86	91.633	Mus_musculus
ENSPMGG00000021179	ddb1	99	91.531	MGP_PahariEiJ_G0014189	Ddb1	86	91.531	Mus_pahari
ENSPMGG00000021179	ddb1	99	91.633	MGP_SPRETEiJ_G0023609	Ddb1	86	91.633	Mus_spretus
ENSPMGG00000021179	ddb1	99	90.714	ENSMPUG00000014200	DDB1	88	90.714	Mustela_putorius_furo
ENSPMGG00000021179	ddb1	99	91.633	ENSMLUG00000013232	DDB1	86	91.633	Myotis_lucifugus
ENSPMGG00000021179	ddb1	99	91.429	ENSNGAG00000009384	Ddb1	86	91.429	Nannospalax_galili
ENSPMGG00000021179	ddb1	99	98.469	ENSNBRG00000019581	ddb1	86	98.469	Neolamprologus_brichardi
ENSPMGG00000021179	ddb1	99	88.508	ENSNLEG00000002022	DDB1	86	88.508	Nomascus_leucogenys
ENSPMGG00000021179	ddb1	88	100.000	ENSMEUG00000001099	DDB1	78	100.000	Notamacropus_eugenii
ENSPMGG00000021179	ddb1	89	87.830	ENSOPRG00000008254	DDB1	76	87.830	Ochotona_princeps
ENSPMGG00000021179	ddb1	99	91.224	ENSODEG00000002419	DDB1	86	91.224	Octodon_degus
ENSPMGG00000021179	ddb1	99	98.469	ENSONIG00000005804	ddb1	86	98.469	Oreochromis_niloticus
ENSPMGG00000021179	ddb1	89	90.940	ENSOANG00000004897	DDB1	84	90.940	Ornithorhynchus_anatinus
ENSPMGG00000021179	ddb1	99	91.531	ENSOCUG00000001667	DDB1	86	91.531	Oryctolagus_cuniculus
ENSPMGG00000021179	ddb1	99	97.857	ENSORLG00000001399	ddb1	92	97.857	Oryzias_latipes
ENSPMGG00000021179	ddb1	99	97.755	ENSORLG00020001277	ddb1	87	97.755	Oryzias_latipes_hni
ENSPMGG00000021179	ddb1	99	97.857	ENSORLG00015002080	ddb1	90	97.857	Oryzias_latipes_hsok
ENSPMGG00000021179	ddb1	99	98.163	ENSOMEG00000006181	ddb1	99	92.058	Oryzias_melastigma
ENSPMGG00000021179	ddb1	99	91.633	ENSOGAG00000016103	DDB1	86	91.633	Otolemur_garnettii
ENSPMGG00000021179	ddb1	99	91.429	ENSOARG00000011716	DDB1	85	91.429	Ovis_aries
ENSPMGG00000021179	ddb1	99	91.429	ENSPPAG00000035343	DDB1	86	91.429	Pan_paniscus
ENSPMGG00000021179	ddb1	99	91.531	ENSPPRG00000013300	DDB1	86	91.531	Panthera_pardus
ENSPMGG00000021179	ddb1	98	91.554	ENSPTIG00000006909	DDB1	84	91.554	Panthera_tigris_altaica
ENSPMGG00000021179	ddb1	99	91.429	ENSPTRG00000003737	DDB1	86	91.429	Pan_troglodytes
ENSPMGG00000021179	ddb1	99	91.429	ENSPANG00000000242	DDB1	86	91.429	Papio_anubis
ENSPMGG00000021179	ddb1	99	96.122	ENSPKIG00000019213	ddb1	86	96.122	Paramormyrops_kingsleyae
ENSPMGG00000021179	ddb1	98	90.249	ENSPSIG00000013275	DDB1	86	90.249	Pelodiscus_sinensis
ENSPMGG00000021179	ddb1	99	91.531	ENSPEMG00000012241	Ddb1	86	91.531	Peromyscus_maniculatus_bairdii
ENSPMGG00000021179	ddb1	98	86.458	ENSPMAG00000008479	ddb1	94	86.458	Petromyzon_marinus
ENSPMGG00000021179	ddb1	99	91.837	ENSPCIG00000002643	DDB1	86	91.837	Phascolarctos_cinereus
ENSPMGG00000021179	ddb1	99	98.469	ENSPFOG00000002768	ddb1	86	98.469	Poecilia_formosa
ENSPMGG00000021179	ddb1	99	98.469	ENSPLAG00000017227	ddb1	89	98.469	Poecilia_latipinna
ENSPMGG00000021179	ddb1	99	98.469	ENSPMEG00000011398	ddb1	89	98.469	Poecilia_mexicana
ENSPMGG00000021179	ddb1	99	98.469	ENSPREG00000004440	ddb1	89	98.469	Poecilia_reticulata
ENSPMGG00000021179	ddb1	99	87.169	ENSPPYG00000003193	DDB1	86	87.169	Pongo_abelii
ENSPMGG00000021179	ddb1	82	89.567	ENSPCAG00000011040	DDB1	70	89.567	Procavia_capensis
ENSPMGG00000021179	ddb1	99	90.937	ENSPCOG00000015176	DDB1	86	90.937	Propithecus_coquereli
ENSPMGG00000021179	ddb1	99	91.327	ENSPVAG00000003847	DDB1	86	91.327	Pteropus_vampyrus
ENSPMGG00000021179	ddb1	99	96.531	ENSPNAG00000006635	ddb1	89	96.531	Pygocentrus_nattereri
ENSPMGG00000021179	ddb1	99	91.633	ENSRNOG00000020715	Ddb1	86	91.633	Rattus_norvegicus
ENSPMGG00000021179	ddb1	99	91.429	ENSRBIG00000033611	DDB1	87	91.429	Rhinopithecus_bieti
ENSPMGG00000021179	ddb1	99	91.429	ENSRROG00000041407	DDB1	86	91.429	Rhinopithecus_roxellana
ENSPMGG00000021179	ddb1	99	91.531	ENSSBOG00000019775	DDB1	86	91.531	Saimiri_boliviensis_boliviensis
ENSPMGG00000021179	ddb1	93	88.901	ENSSHAG00000011600	DDB1	85	88.901	Sarcophilus_harrisii
ENSPMGG00000021179	ddb1	99	96.327	ENSSFOG00015011151	ddb1	88	96.327	Scleropages_formosus
ENSPMGG00000021179	ddb1	99	98.776	ENSSMAG00000009495	ddb1	86	98.776	Scophthalmus_maximus
ENSPMGG00000021179	ddb1	99	99.184	ENSSDUG00000004642	ddb1	86	99.184	Seriola_dumerili
ENSPMGG00000021179	ddb1	99	99.184	ENSSLDG00000015804	ddb1	86	99.184	Seriola_lalandi_dorsalis
ENSPMGG00000021179	ddb1	69	94.340	ENSSARG00000003290	-	62	94.340	Sorex_araneus
ENSPMGG00000021179	ddb1	99	90.816	ENSSPUG00000019338	DDB1	86	90.816	Sphenodon_punctatus
ENSPMGG00000021179	ddb1	99	99.082	ENSSPAG00000009888	ddb1	100	96.029	Stegastes_partitus
ENSPMGG00000021179	ddb1	99	90.918	ENSSSCG00000013094	DDB1	86	90.918	Sus_scrofa
ENSPMGG00000021179	ddb1	99	91.122	ENSTGUG00000006414	DDB1	86	91.122	Taeniopygia_guttata
ENSPMGG00000021179	ddb1	99	98.061	ENSTRUG00000016682	ddb1	100	95.214	Takifugu_rubripes
ENSPMGG00000021179	ddb1	86	91.795	ENSTNIG00000009565	ddb1	84	91.795	Tetraodon_nigroviridis
ENSPMGG00000021179	ddb1	91	84.983	ENSTTRG00000011055	DDB1	80	84.983	Tursiops_truncatus
ENSPMGG00000021179	ddb1	99	91.531	ENSUAMG00000017793	DDB1	85	91.531	Ursus_americanus
ENSPMGG00000021179	ddb1	99	91.531	ENSUMAG00000011788	DDB1	89	91.531	Ursus_maritimus
ENSPMGG00000021179	ddb1	94	86.566	ENSVPAG00000007963	DDB1	82	86.566	Vicugna_pacos
ENSPMGG00000021179	ddb1	99	91.531	ENSVVUG00000004987	DDB1	86	91.531	Vulpes_vulpes
ENSPMGG00000021179	ddb1	100	88.595	ENSXETG00000008820	ddb1	86	88.595	Xenopus_tropicalis
ENSPMGG00000021179	ddb1	100	98.267	ENSXCOG00000013956	ddb1	100	98.267	Xiphophorus_couchianus
ENSPMGG00000021179	ddb1	99	98.265	ENSXMAG00000000022	ddb1	91	98.265	Xiphophorus_maculatus