EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000021344 (Gene tree)
Gene ID: -
Gene Symbol: lsm12b
Alias: -
Full Name: LSM12 homolog b
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 5254 bases
Position: chrKN461461.1:129061-134314
Accession: ZDB-GENE-040426-2164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000026458	AD	PF09793.9	1.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000028176	-	591	-	ENSPMGP00000026458	196 (aa)	-	UPI000A1C55F6

Gene Model

Click here to download ENSPMGG00000021344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000021344's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000021344	lsm12b	100	84.694	ENSG00000161654	LSM12	100	84.694	Homo_sapiens
ENSPMGG00000021344	lsm12b	100	97.959	ENSAPOG00000007907	lsm12b	100	97.959	Acanthochromis_polyacanthus
ENSPMGG00000021344	lsm12b	100	82.915	ENSAMEG00000018321	LSM12	100	82.915	Ailuropoda_melanoleuca
ENSPMGG00000021344	lsm12b	100	96.429	ENSACIG00000008538	lsm12b	100	96.429	Amphilophus_citrinellus
ENSPMGG00000021344	lsm12b	100	98.469	ENSAOCG00000021847	lsm12b	88	98.469	Amphiprion_ocellaris
ENSPMGG00000021344	lsm12b	100	98.469	ENSAPEG00000002252	lsm12b	100	98.469	Amphiprion_percula
ENSPMGG00000021344	lsm12b	100	97.959	ENSATEG00000005705	lsm12b	100	97.959	Anabas_testudineus
ENSPMGG00000021344	lsm12b	100	83.673	ENSACAG00000004618	LSM12	100	83.673	Anolis_carolinensis
ENSPMGG00000021344	lsm12b	100	84.694	ENSANAG00000029011	LSM12	100	84.694	Aotus_nancymaae
ENSPMGG00000021344	lsm12b	100	96.939	ENSACLG00000026332	lsm12b	100	96.939	Astatotilapia_calliptera
ENSPMGG00000021344	lsm12b	100	92.857	ENSAMXG00000032952	lsm12b	100	92.857	Astyanax_mexicanus
ENSPMGG00000021344	lsm12b	100	84.694	ENSAMXG00000036117	lsm12a	91	84.694	Astyanax_mexicanus
ENSPMGG00000021344	lsm12b	100	84.694	ENSBTAG00000016252	LSM12	100	84.694	Bos_taurus
ENSPMGG00000021344	lsm12b	100	84.694	ENSCJAG00000048480	LSM12	100	84.694	Callithrix_jacchus
ENSPMGG00000021344	lsm12b	100	84.694	ENSCAFG00000014379	LSM12	92	84.694	Canis_familiaris
ENSPMGG00000021344	lsm12b	100	84.694	ENSCAFG00020012173	LSM12	100	84.694	Canis_lupus_dingo
ENSPMGG00000021344	lsm12b	100	84.694	ENSCHIG00000018175	LSM12	100	84.694	Capra_hircus
ENSPMGG00000021344	lsm12b	100	84.694	ENSTSYG00000036361	LSM12	100	84.694	Carlito_syrichta
ENSPMGG00000021344	lsm12b	83	81.481	ENSCAPG00000009647	LSM12	89	81.481	Cavia_aperea
ENSPMGG00000021344	lsm12b	100	84.184	ENSCPOG00000012860	LSM12	100	84.184	Cavia_porcellus
ENSPMGG00000021344	lsm12b	100	84.694	ENSCCAG00000032905	LSM12	100	84.694	Cebus_capucinus
ENSPMGG00000021344	lsm12b	100	84.694	ENSCATG00000030577	-	100	84.694	Cercocebus_atys
ENSPMGG00000021344	lsm12b	100	84.694	ENSCLAG00000015759	LSM12	100	84.694	Chinchilla_lanigera
ENSPMGG00000021344	lsm12b	100	85.204	ENSCSAG00000003486	LSM12	100	85.204	Chlorocebus_sabaeus
ENSPMGG00000021344	lsm12b	56	85.321	ENSCHOG00000001198	LSM12	100	85.321	Choloepus_hoffmanni
ENSPMGG00000021344	lsm12b	100	85.204	ENSCPBG00000027105	LSM12	100	85.204	Chrysemys_picta_bellii
ENSPMGG00000021344	lsm12b	100	84.694	ENSCANG00000043328	LSM12	100	84.694	Colobus_angolensis_palliatus
ENSPMGG00000021344	lsm12b	100	84.694	ENSCGRG00001002094	Lsm12	100	84.694	Cricetulus_griseus_chok1gshd
ENSPMGG00000021344	lsm12b	89	77.011	ENSCGRG00000004316	Lsm12	98	77.011	Cricetulus_griseus_crigri
ENSPMGG00000021344	lsm12b	100	97.959	ENSCSEG00000008434	lsm12b	100	97.959	Cynoglossus_semilaevis
ENSPMGG00000021344	lsm12b	100	96.429	ENSCVAG00000008755	lsm12b	100	96.429	Cyprinodon_variegatus
ENSPMGG00000021344	lsm12b	100	85.714	ENSDARG00000028848	lsm12a	100	85.714	Danio_rerio
ENSPMGG00000021344	lsm12b	100	94.388	ENSDARG00000109510	lsm12b	100	94.388	Danio_rerio
ENSPMGG00000021344	lsm12b	100	84.694	ENSDNOG00000002418	LSM12	91	84.694	Dasypus_novemcinctus
ENSPMGG00000021344	lsm12b	100	84.694	ENSDORG00000016381	Lsm12	100	84.694	Dipodomys_ordii
ENSPMGG00000021344	lsm12b	83	33.735	FBgn0030364	Lsm12	76	33.735	Drosophila_melanogaster
ENSPMGG00000021344	lsm12b	73	32.911	FBgn0036057	CG14164	83	32.911	Drosophila_melanogaster
ENSPMGG00000021344	lsm12b	100	84.184	ENSETEG00000008374	LSM12	100	84.184	Echinops_telfairi
ENSPMGG00000021344	lsm12b	88	75.145	ENSETEG00000011012	-	99	75.145	Echinops_telfairi
ENSPMGG00000021344	lsm12b	85	67.066	ENSEBUG00000016299	lsm12a	92	67.066	Eptatretus_burgeri
ENSPMGG00000021344	lsm12b	100	84.694	ENSEASG00005010155	LSM12	100	84.694	Equus_asinus_asinus
ENSPMGG00000021344	lsm12b	100	84.694	ENSECAG00000009071	LSM12	100	84.694	Equus_caballus
ENSPMGG00000021344	lsm12b	78	84.967	ENSEEUG00000002419	-	100	84.967	Erinaceus_europaeus
ENSPMGG00000021344	lsm12b	100	91.327	ENSELUG00000000256	-	100	91.327	Esox_lucius
ENSPMGG00000021344	lsm12b	100	94.388	ENSELUG00000015538	lsm12b	100	89.796	Esox_lucius
ENSPMGG00000021344	lsm12b	100	84.694	ENSFCAG00000037021	LSM12	100	84.694	Felis_catus
ENSPMGG00000021344	lsm12b	80	81.410	ENSFDAG00000008954	LSM12	91	81.410	Fukomys_damarensis
ENSPMGG00000021344	lsm12b	100	96.429	ENSFHEG00000019913	lsm12b	100	96.429	Fundulus_heteroclitus
ENSPMGG00000021344	lsm12b	81	97.468	ENSGMOG00000015449	lsm12b	100	97.468	Gadus_morhua
ENSPMGG00000021344	lsm12b	78	85.621	ENSGALG00000039803	LSM12	100	85.621	Gallus_gallus
ENSPMGG00000021344	lsm12b	100	96.429	ENSGAFG00000011829	lsm12b	100	96.429	Gambusia_affinis
ENSPMGG00000021344	lsm12b	81	98.101	ENSGACG00000003428	lsm12b	100	98.101	Gasterosteus_aculeatus
ENSPMGG00000021344	lsm12b	100	84.184	ENSGAGG00000021965	LSM12	100	84.184	Gopherus_agassizii
ENSPMGG00000021344	lsm12b	100	84.694	ENSGGOG00000010589	-	100	84.694	Gorilla_gorilla
ENSPMGG00000021344	lsm12b	85	97.006	ENSHBUG00000007667	lsm12b	74	97.006	Haplochromis_burtoni
ENSPMGG00000021344	lsm12b	100	84.694	ENSHGLG00000011411	LSM12	100	84.694	Heterocephalus_glaber_female
ENSPMGG00000021344	lsm12b	79	84.416	ENSHGLG00100000241	LSM12	82	84.416	Heterocephalus_glaber_male
ENSPMGG00000021344	lsm12b	100	94.388	ENSHCOG00000002094	lsm12b	100	94.388	Hippocampus_comes
ENSPMGG00000021344	lsm12b	100	93.878	ENSIPUG00000014800	lsm12	100	93.878	Ictalurus_punctatus
ENSPMGG00000021344	lsm12b	99	84.536	ENSIPUG00000008936	lsm12a	99	84.536	Ictalurus_punctatus
ENSPMGG00000021344	lsm12b	100	84.694	ENSSTOG00000007403	LSM12	100	84.694	Ictidomys_tridecemlineatus
ENSPMGG00000021344	lsm12b	96	75.263	ENSJJAG00000011793	-	100	75.263	Jaculus_jaculus
ENSPMGG00000021344	lsm12b	80	72.956	ENSJJAG00000014652	-	95	72.956	Jaculus_jaculus
ENSPMGG00000021344	lsm12b	100	83.673	ENSJJAG00000004364	-	100	84.545	Jaculus_jaculus
ENSPMGG00000021344	lsm12b	85	96.407	ENSKMAG00000007704	lsm12b	56	96.407	Kryptolebias_marmoratus
ENSPMGG00000021344	lsm12b	100	97.959	ENSLBEG00000027999	lsm12b	100	97.959	Labrus_bergylta
ENSPMGG00000021344	lsm12b	100	88.265	ENSLACG00000015981	LSM12	100	88.265	Latimeria_chalumnae
ENSPMGG00000021344	lsm12b	100	91.837	ENSLOCG00000013079	lsm12b	99	91.837	Lepisosteus_oculatus
ENSPMGG00000021344	lsm12b	100	84.694	ENSLAFG00000005202	LSM12	100	84.694	Loxodonta_africana
ENSPMGG00000021344	lsm12b	100	84.694	ENSMFAG00000031376	LSM12	100	84.694	Macaca_fascicularis
ENSPMGG00000021344	lsm12b	100	84.694	ENSMMUG00000006804	LSM12	100	84.694	Macaca_mulatta
ENSPMGG00000021344	lsm12b	65	73.563	ENSMMUG00000042106	-	100	73.563	Macaca_mulatta
ENSPMGG00000021344	lsm12b	100	84.694	ENSMNEG00000030594	-	100	84.694	Macaca_nemestrina
ENSPMGG00000021344	lsm12b	100	84.694	ENSMLEG00000039934	LSM12	100	84.694	Mandrillus_leucophaeus
ENSPMGG00000021344	lsm12b	100	97.959	ENSMAMG00000004279	lsm12b	100	97.959	Mastacembelus_armatus
ENSPMGG00000021344	lsm12b	100	96.939	ENSMZEG00005005754	lsm12b	100	96.939	Maylandia_zebra
ENSPMGG00000021344	lsm12b	100	85.204	ENSMICG00000037219	LSM12	100	85.204	Microcebus_murinus
ENSPMGG00000021344	lsm12b	100	84.694	ENSMOCG00000019878	-	100	84.694	Microtus_ochrogaster
ENSPMGG00000021344	lsm12b	100	71.939	ENSMOCG00000017015	-	86	71.939	Microtus_ochrogaster
ENSPMGG00000021344	lsm12b	100	97.959	ENSMMOG00000020848	lsm12b	100	97.959	Mola_mola
ENSPMGG00000021344	lsm12b	100	97.959	ENSMALG00000007578	lsm12b	100	97.959	Monopterus_albus
ENSPMGG00000021344	lsm12b	100	84.184	MGP_CAROLIEiJ_G0017241	Lsm12	100	84.184	Mus_caroli
ENSPMGG00000021344	lsm12b	100	84.694	ENSMUSG00000020922	Lsm12	100	84.694	Mus_musculus
ENSPMGG00000021344	lsm12b	100	77.934	MGP_PahariEiJ_G0018371	Lsm12	100	77.934	Mus_pahari
ENSPMGG00000021344	lsm12b	100	84.184	MGP_SPRETEiJ_G0018084	Lsm12	100	84.184	Mus_spretus
ENSPMGG00000021344	lsm12b	100	85.204	ENSMLUG00000006391	LSM12	100	85.204	Myotis_lucifugus
ENSPMGG00000021344	lsm12b	100	59.113	ENSNGAG00000015429	-	100	59.113	Nannospalax_galili
ENSPMGG00000021344	lsm12b	100	84.694	ENSNGAG00000001870	Lsm12	100	84.694	Nannospalax_galili
ENSPMGG00000021344	lsm12b	100	96.939	ENSNBRG00000006266	lsm12b	100	96.939	Neolamprologus_brichardi
ENSPMGG00000021344	lsm12b	100	84.694	ENSNLEG00000005580	-	100	84.694	Nomascus_leucogenys
ENSPMGG00000021344	lsm12b	85	84.940	ENSMEUG00000007501	-	100	84.940	Notamacropus_eugenii
ENSPMGG00000021344	lsm12b	100	84.694	ENSOPRG00000008552	LSM12	100	84.694	Ochotona_princeps
ENSPMGG00000021344	lsm12b	99	84.021	ENSODEG00000017998	-	99	84.021	Octodon_degus
ENSPMGG00000021344	lsm12b	100	76.531	ENSODEG00000007886	-	74	76.531	Octodon_degus
ENSPMGG00000021344	lsm12b	100	96.939	ENSONIG00000007933	lsm12b	100	96.939	Oreochromis_niloticus
ENSPMGG00000021344	lsm12b	100	82.915	ENSOCUG00000008566	-	100	82.915	Oryctolagus_cuniculus
ENSPMGG00000021344	lsm12b	99	78.974	ENSOCUG00000027889	-	100	78.974	Oryctolagus_cuniculus
ENSPMGG00000021344	lsm12b	99	78.462	ENSOCUG00000024823	-	100	78.462	Oryctolagus_cuniculus
ENSPMGG00000021344	lsm12b	99	79.487	ENSOCUG00000021254	-	100	79.487	Oryctolagus_cuniculus
ENSPMGG00000021344	lsm12b	100	97.449	ENSORLG00000011310	lsm12b	100	97.449	Oryzias_latipes
ENSPMGG00000021344	lsm12b	100	97.449	ENSORLG00020002060	lsm12b	92	97.449	Oryzias_latipes_hni
ENSPMGG00000021344	lsm12b	100	97.449	ENSORLG00015001647	lsm12b	92	97.449	Oryzias_latipes_hsok
ENSPMGG00000021344	lsm12b	100	98.469	ENSOMEG00000006184	lsm12b	92	98.469	Oryzias_melastigma
ENSPMGG00000021344	lsm12b	100	85.204	ENSOGAG00000010489	LSM12	100	85.204	Otolemur_garnettii
ENSPMGG00000021344	lsm12b	100	81.683	ENSOARG00000006589	LSM12	100	81.683	Ovis_aries
ENSPMGG00000021344	lsm12b	100	75.510	ENSPPAG00000034974	-	100	75.510	Pan_paniscus
ENSPMGG00000021344	lsm12b	100	84.694	ENSPPRG00000023420	LSM12	100	84.694	Panthera_pardus
ENSPMGG00000021344	lsm12b	72	83.636	ENSPTIG00000014850	-	100	83.636	Panthera_tigris_altaica
ENSPMGG00000021344	lsm12b	78	84.967	ENSPTIG00000012704	-	82	84.967	Panthera_tigris_altaica
ENSPMGG00000021344	lsm12b	100	84.694	ENSPTRG00000009261	LSM12	100	84.694	Pan_troglodytes
ENSPMGG00000021344	lsm12b	100	84.694	ENSPANG00000021315	-	100	84.694	Papio_anubis
ENSPMGG00000021344	lsm12b	100	83.163	ENSPKIG00000017932	-	100	83.163	Paramormyrops_kingsleyae
ENSPMGG00000021344	lsm12b	100	92.857	ENSPKIG00000021058	lsm12b	100	92.857	Paramormyrops_kingsleyae
ENSPMGG00000021344	lsm12b	100	84.694	ENSPEMG00000012199	Lsm12	100	84.694	Peromyscus_maniculatus_bairdii
ENSPMGG00000021344	lsm12b	89	67.429	ENSPMAG00000005461	lsm12a	99	67.429	Petromyzon_marinus
ENSPMGG00000021344	lsm12b	100	84.694	ENSPCIG00000020244	LSM12	100	84.694	Phascolarctos_cinereus
ENSPMGG00000021344	lsm12b	100	95.408	ENSPFOG00000015930	lsm12b	100	95.408	Poecilia_formosa
ENSPMGG00000021344	lsm12b	100	95.408	ENSPLAG00000021089	lsm12b	100	95.408	Poecilia_latipinna
ENSPMGG00000021344	lsm12b	100	95.408	ENSPMEG00000012961	lsm12b	100	95.408	Poecilia_mexicana
ENSPMGG00000021344	lsm12b	87	96.491	ENSPREG00000010236	lsm12b	95	96.491	Poecilia_reticulata
ENSPMGG00000021344	lsm12b	100	84.694	ENSPPYG00000008344	LSM12	100	84.694	Pongo_abelii
ENSPMGG00000021344	lsm12b	81	85.535	ENSPCAG00000008790	LSM12	100	85.535	Procavia_capensis
ENSPMGG00000021344	lsm12b	100	84.694	ENSPCOG00000027951	LSM12	100	84.694	Propithecus_coquereli
ENSPMGG00000021344	lsm12b	100	85.204	ENSPVAG00000013706	LSM12	100	85.204	Pteropus_vampyrus
ENSPMGG00000021344	lsm12b	100	96.939	ENSPNYG00000003386	lsm12b	100	96.939	Pundamilia_nyererei
ENSPMGG00000021344	lsm12b	100	84.694	ENSPNAG00000018435	lsm12a	100	84.694	Pygocentrus_nattereri
ENSPMGG00000021344	lsm12b	100	93.367	ENSPNAG00000004186	lsm12b	100	93.367	Pygocentrus_nattereri
ENSPMGG00000021344	lsm12b	100	84.694	ENSRNOG00000020894	Lsm12	100	84.694	Rattus_norvegicus
ENSPMGG00000021344	lsm12b	100	84.694	ENSRBIG00000027910	LSM12	100	84.694	Rhinopithecus_bieti
ENSPMGG00000021344	lsm12b	97	52.880	ENSRROG00000000537	-	97	52.880	Rhinopithecus_roxellana
ENSPMGG00000021344	lsm12b	100	84.694	ENSRROG00000045530	-	100	84.694	Rhinopithecus_roxellana
ENSPMGG00000021344	lsm12b	100	84.694	ENSSBOG00000025310	LSM12	100	84.694	Saimiri_boliviensis_boliviensis
ENSPMGG00000021344	lsm12b	81	83.544	ENSSHAG00000014914	LSM12	100	83.544	Sarcophilus_harrisii
ENSPMGG00000021344	lsm12b	100	93.367	ENSSFOG00015020392	lsm12a	100	93.367	Scleropages_formosus
ENSPMGG00000021344	lsm12b	100	93.878	ENSSFOG00015009612	lsm12	100	93.878	Scleropages_formosus
ENSPMGG00000021344	lsm12b	100	97.959	ENSSMAG00000008089	lsm12b	100	97.959	Scophthalmus_maximus
ENSPMGG00000021344	lsm12b	100	98.469	ENSSDUG00000012711	lsm12b	100	98.469	Seriola_dumerili
ENSPMGG00000021344	lsm12b	100	98.469	ENSSLDG00000007404	lsm12b	100	98.469	Seriola_lalandi_dorsalis
ENSPMGG00000021344	lsm12b	78	84.314	ENSSARG00000005537	LSM12	100	84.314	Sorex_araneus
ENSPMGG00000021344	lsm12b	100	85.204	ENSSPUG00000011984	LSM12	100	85.204	Sphenodon_punctatus
ENSPMGG00000021344	lsm12b	100	98.469	ENSSPAG00000017058	lsm12b	100	98.469	Stegastes_partitus
ENSPMGG00000021344	lsm12b	100	84.694	ENSSSCG00000032394	LSM12	100	84.694	Sus_scrofa
ENSPMGG00000021344	lsm12b	100	96.939	ENSTRUG00000007121	lsm12b	100	96.939	Takifugu_rubripes
ENSPMGG00000021344	lsm12b	100	95.918	ENSTNIG00000014436	lsm12b	100	95.918	Tetraodon_nigroviridis
ENSPMGG00000021344	lsm12b	100	82.143	ENSTBEG00000012392	-	100	82.143	Tupaia_belangeri
ENSPMGG00000021344	lsm12b	100	84.184	ENSTBEG00000012523	-	100	84.184	Tupaia_belangeri
ENSPMGG00000021344	lsm12b	100	84.694	ENSTTRG00000010433	LSM12	100	84.694	Tursiops_truncatus
ENSPMGG00000021344	lsm12b	100	84.694	ENSUAMG00000006313	LSM12	100	84.694	Ursus_americanus
ENSPMGG00000021344	lsm12b	81	82.278	ENSUMAG00000012987	LSM12	90	82.278	Ursus_maritimus
ENSPMGG00000021344	lsm12b	100	80.102	ENSVPAG00000011145	LSM12	100	80.102	Vicugna_pacos
ENSPMGG00000021344	lsm12b	100	84.694	ENSVVUG00000017581	LSM12	100	84.694	Vulpes_vulpes
ENSPMGG00000021344	lsm12b	82	61.250	ENSXETG00000003371	lsm12	77	61.250	Xenopus_tropicalis
ENSPMGG00000021344	lsm12b	100	96.429	ENSXCOG00000003994	lsm12b	100	96.429	Xiphophorus_couchianus
ENSPMGG00000021344	lsm12b	100	96.429	ENSXMAG00000020950	lsm12b	100	96.429	Xiphophorus_maculatus