EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000021352 (Gene tree)
Gene ID: -
Gene Symbol: prpf38a
Alias: -
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 6455 bases
Position: chrKN464245.1:25279-31733
Accession: ZDB-GENE-040801-225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000026468	PRP38	PF03371.15	6.5e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000028188	-	870	-	ENSPMGP00000026468	289 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000021352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000021352's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000021352	prpf38a	99	78.641	ENSG00000134748	PRPF38A	70	89.401	Homo_sapiens
ENSPMGG00000021352	prpf38a	76	91.403	ENSAPOG00000011652	prpf38a	70	91.705	Acanthochromis_polyacanthus
ENSPMGG00000021352	prpf38a	99	78.641	ENSAMEG00000009319	PRPF38A	70	89.401	Ailuropoda_melanoleuca
ENSPMGG00000021352	prpf38a	76	91.324	ENSACIG00000012292	prpf38a	92	82.796	Amphilophus_citrinellus
ENSPMGG00000021352	prpf38a	76	91.403	ENSAOCG00000018004	prpf38a	70	91.705	Amphiprion_ocellaris
ENSPMGG00000021352	prpf38a	76	91.403	ENSAPEG00000021414	prpf38a	70	91.705	Amphiprion_percula
ENSPMGG00000021352	prpf38a	77	76.639	ENSAPLG00000005827	PRPF38A	76	78.836	Anas_platyrhynchos
ENSPMGG00000021352	prpf38a	99	76.699	ENSACAG00000008249	PRPF38A	81	78.346	Anolis_carolinensis
ENSPMGG00000021352	prpf38a	99	59.539	ENSANAG00000029204	-	68	56.818	Aotus_nancymaae
ENSPMGG00000021352	prpf38a	99	78.641	ENSANAG00000027839	PRPF38A	70	89.401	Aotus_nancymaae
ENSPMGG00000021352	prpf38a	76	90.498	ENSACLG00000021595	prpf38a	72	90.783	Astatotilapia_calliptera
ENSPMGG00000021352	prpf38a	78	90.708	ENSAMXG00000029274	prpf38a	78	83.197	Astyanax_mexicanus
ENSPMGG00000021352	prpf38a	99	78.641	ENSBTAG00000002720	PRPF38A	73	89.401	Bos_taurus
ENSPMGG00000021352	prpf38a	67	62.051	WBGene00008380	prp-38	59	63.830	Caenorhabditis_elegans
ENSPMGG00000021352	prpf38a	99	78.641	ENSCJAG00000021594	PRPF38A	73	89.401	Callithrix_jacchus
ENSPMGG00000021352	prpf38a	99	78.641	ENSCAFG00000003740	PRPF38A	70	89.401	Canis_familiaris
ENSPMGG00000021352	prpf38a	99	78.641	ENSCAFG00020010939	PRPF38A	70	89.401	Canis_lupus_dingo
ENSPMGG00000021352	prpf38a	99	78.641	ENSCHIG00000024730	PRPF38A	70	89.401	Capra_hircus
ENSPMGG00000021352	prpf38a	99	78.641	ENSTSYG00000009868	-	70	89.401	Carlito_syrichta
ENSPMGG00000021352	prpf38a	65	85.106	ENSTSYG00000031994	-	62	86.207	Carlito_syrichta
ENSPMGG00000021352	prpf38a	99	79.153	ENSCPOG00000005079	PRPF38A	70	89.401	Cavia_porcellus
ENSPMGG00000021352	prpf38a	79	88.312	ENSCCAG00000026502	PRPF38A	70	89.401	Cebus_capucinus
ENSPMGG00000021352	prpf38a	93	53.659	ENSCATG00000044190	-	81	54.435	Cercocebus_atys
ENSPMGG00000021352	prpf38a	99	78.641	ENSCATG00000032296	PRPF38A	70	89.401	Cercocebus_atys
ENSPMGG00000021352	prpf38a	99	78.641	ENSCLAG00000005816	PRPF38A	70	89.401	Chinchilla_lanigera
ENSPMGG00000021352	prpf38a	99	77.994	ENSCPBG00000014791	PRPF38A	81	81.890	Chrysemys_picta_bellii
ENSPMGG00000021352	prpf38a	79	65.368	ENSCSAVG00000009580	-	71	68.664	Ciona_savignyi
ENSPMGG00000021352	prpf38a	79	88.312	ENSCANG00000032608	PRPF38A	87	79.693	Colobus_angolensis_palliatus
ENSPMGG00000021352	prpf38a	99	78.641	ENSCGRG00001018502	-	70	89.401	Cricetulus_griseus_chok1gshd
ENSPMGG00000021352	prpf38a	84	71.875	ENSCGRG00001002557	-	73	76.852	Cricetulus_griseus_chok1gshd
ENSPMGG00000021352	prpf38a	99	78.641	ENSCGRG00000014868	Prpf38a	70	89.401	Cricetulus_griseus_crigri
ENSPMGG00000021352	prpf38a	76	91.324	ENSCSEG00000001269	prpf38a	97	83.154	Cynoglossus_semilaevis
ENSPMGG00000021352	prpf38a	78	90.708	ENSDARG00000039213	prpf38a	78	83.197	Danio_rerio
ENSPMGG00000021352	prpf38a	99	78.641	ENSDNOG00000042326	PRPF38A	85	79.693	Dasypus_novemcinctus
ENSPMGG00000021352	prpf38a	99	67.208	ENSDORG00000023857	-	65	73.148	Dipodomys_ordii
ENSPMGG00000021352	prpf38a	91	71.698	ENSDORG00000023691	-	75	81.106	Dipodomys_ordii
ENSPMGG00000021352	prpf38a	91	71.698	ENSDORG00000025371	-	75	81.106	Dipodomys_ordii
ENSPMGG00000021352	prpf38a	69	73.134	FBgn0050342	Prp38	57	75.000	Drosophila_melanogaster
ENSPMGG00000021352	prpf38a	81	79.916	ENSEBUG00000012588	prpf38a	85	71.698	Eptatretus_burgeri
ENSPMGG00000021352	prpf38a	99	78.641	ENSEASG00005014427	PRPF38A	70	89.401	Equus_asinus_asinus
ENSPMGG00000021352	prpf38a	99	78.641	ENSECAG00000022628	PRPF38A	70	89.401	Equus_caballus
ENSPMGG00000021352	prpf38a	78	88.938	ENSELUG00000021094	prpf38a	83	84.836	Esox_lucius
ENSPMGG00000021352	prpf38a	99	78.641	ENSFCAG00000002518	PRPF38A	70	89.401	Felis_catus
ENSPMGG00000021352	prpf38a	99	74.419	ENSFALG00000003612	-	72	83.410	Ficedula_albicollis
ENSPMGG00000021352	prpf38a	85	75.564	ENSFALG00000005598	-	78	79.621	Ficedula_albicollis
ENSPMGG00000021352	prpf38a	99	78.758	ENSFDAG00000011287	PRPF38A	70	89.401	Fukomys_damarensis
ENSPMGG00000021352	prpf38a	78	92.920	ENSFHEG00000014317	prpf38a	97	82.105	Fundulus_heteroclitus
ENSPMGG00000021352	prpf38a	57	94.578	ENSGMOG00000011384	prpf38a	54	94.578	Gadus_morhua
ENSPMGG00000021352	prpf38a	99	78.964	ENSGALG00000010627	PRPF38A	81	83.071	Gallus_gallus
ENSPMGG00000021352	prpf38a	78	93.363	ENSGAFG00000012422	prpf38a	58	93.363	Gambusia_affinis
ENSPMGG00000021352	prpf38a	99	78.317	ENSGAGG00000020547	PRPF38A	81	82.283	Gopherus_agassizii
ENSPMGG00000021352	prpf38a	99	78.641	ENSGGOG00000003940	PRPF38A	70	89.401	Gorilla_gorilla
ENSPMGG00000021352	prpf38a	65	93.651	ENSHBUG00000020572	prpf38a	80	93.617	Haplochromis_burtoni
ENSPMGG00000021352	prpf38a	99	74.419	ENSHGLG00000007918	-	70	77.419	Heterocephalus_glaber_female
ENSPMGG00000021352	prpf38a	99	78.641	ENSHGLG00000000475	PRPF38A	70	89.401	Heterocephalus_glaber_female
ENSPMGG00000021352	prpf38a	99	78.641	ENSHGLG00100008935	PRPF38A	70	89.401	Heterocephalus_glaber_male
ENSPMGG00000021352	prpf38a	99	74.419	ENSHGLG00100003928	-	70	77.419	Heterocephalus_glaber_male
ENSPMGG00000021352	prpf38a	62	93.407	ENSHCOG00000020781	prpf38a	59	93.617	Hippocampus_comes
ENSPMGG00000021352	prpf38a	79	88.793	ENSIPUG00000005757	prpf38a	64	93.085	Ictalurus_punctatus
ENSPMGG00000021352	prpf38a	99	78.641	ENSSTOG00000015610	PRPF38A	70	89.401	Ictidomys_tridecemlineatus
ENSPMGG00000021352	prpf38a	99	77.994	ENSJJAG00000015811	Prpf38a	81	81.890	Jaculus_jaculus
ENSPMGG00000021352	prpf38a	78	92.920	ENSKMAG00000006588	prpf38a	99	74.183	Kryptolebias_marmoratus
ENSPMGG00000021352	prpf38a	77	88.000	ENSLACG00000011495	PRPF38A	81	81.890	Latimeria_chalumnae
ENSPMGG00000021352	prpf38a	76	87.387	ENSLOCG00000006262	prpf38a	84	79.231	Lepisosteus_oculatus
ENSPMGG00000021352	prpf38a	99	78.641	ENSLAFG00000025862	PRPF38A	70	89.401	Loxodonta_africana
ENSPMGG00000021352	prpf38a	99	78.641	ENSMFAG00000039449	PRPF38A	73	89.401	Macaca_fascicularis
ENSPMGG00000021352	prpf38a	85	75.564	ENSMMUG00000014333	PRPF38A	63	87.356	Macaca_mulatta
ENSPMGG00000021352	prpf38a	99	78.641	ENSMNEG00000031221	PRPF38A	70	89.401	Macaca_nemestrina
ENSPMGG00000021352	prpf38a	93	53.310	ENSMNEG00000040242	-	81	54.839	Macaca_nemestrina
ENSPMGG00000021352	prpf38a	99	78.641	ENSMLEG00000041105	PRPF38A	70	89.401	Mandrillus_leucophaeus
ENSPMGG00000021352	prpf38a	76	90.950	ENSMAMG00000015431	prpf38a	73	91.244	Mastacembelus_armatus
ENSPMGG00000021352	prpf38a	79	88.745	ENSMGAG00000011176	PRPF38A	87	80.077	Meleagris_gallopavo
ENSPMGG00000021352	prpf38a	90	80.916	ENSMAUG00000018029	-	82	84.793	Mesocricetus_auratus
ENSPMGG00000021352	prpf38a	99	78.641	ENSMICG00000014193	PRPF38A	70	89.401	Microcebus_murinus
ENSPMGG00000021352	prpf38a	99	78.641	ENSMOCG00000013080	Prpf38a	70	89.401	Microtus_ochrogaster
ENSPMGG00000021352	prpf38a	78	89.823	ENSMMOG00000016972	prpf38a	76	90.323	Mola_mola
ENSPMGG00000021352	prpf38a	99	77.097	ENSMODG00000000644	PRPF38A	81	80.784	Monodelphis_domestica
ENSPMGG00000021352	prpf38a	99	78.317	MGP_CAROLIEiJ_G0026269	Prpf38a	70	88.940	Mus_caroli
ENSPMGG00000021352	prpf38a	99	78.317	ENSMUSG00000063800	Prpf38a	70	88.940	Mus_musculus
ENSPMGG00000021352	prpf38a	99	78.317	MGP_PahariEiJ_G0028602	Prpf38a	70	88.940	Mus_pahari
ENSPMGG00000021352	prpf38a	79	87.879	MGP_SPRETEiJ_G0027238	Prpf38a	93	91.489	Mus_spretus
ENSPMGG00000021352	prpf38a	99	78.641	ENSMPUG00000006896	PRPF38A	70	89.401	Mustela_putorius_furo
ENSPMGG00000021352	prpf38a	99	79.934	ENSNGAG00000011884	Prpf38a	71	89.401	Nannospalax_galili
ENSPMGG00000021352	prpf38a	76	91.324	ENSNBRG00000004013	prpf38a	70	91.628	Neolamprologus_brichardi
ENSPMGG00000021352	prpf38a	93	53.448	ENSNLEG00000033398	-	59	53.241	Nomascus_leucogenys
ENSPMGG00000021352	prpf38a	91	77.273	ENSNLEG00000017999	PRPF38A	62	88.660	Nomascus_leucogenys
ENSPMGG00000021352	prpf38a	97	56.536	ENSNLEG00000012592	-	78	52.419	Nomascus_leucogenys
ENSPMGG00000021352	prpf38a	99	74.757	ENSMEUG00000003860	PRPF38A	81	75.984	Notamacropus_eugenii
ENSPMGG00000021352	prpf38a	78	88.596	ENSOPRG00000008985	PRPF38A	90	89.401	Ochotona_princeps
ENSPMGG00000021352	prpf38a	99	78.641	ENSODEG00000005869	PRPF38A	70	89.401	Octodon_degus
ENSPMGG00000021352	prpf38a	79	46.121	ENSOANG00000009541	-	81	44.314	Ornithorhynchus_anatinus
ENSPMGG00000021352	prpf38a	99	78.641	ENSOCUG00000000963	PRPF38A	70	89.401	Oryctolagus_cuniculus
ENSPMGG00000021352	prpf38a	96	85.374	ENSORLG00000013485	prpf38a	86	92.975	Oryzias_latipes
ENSPMGG00000021352	prpf38a	96	85.374	ENSORLG00020002130	prpf38a	86	92.975	Oryzias_latipes_hni
ENSPMGG00000021352	prpf38a	96	85.034	ENSORLG00015021393	prpf38a	83	88.525	Oryzias_latipes_hsok
ENSPMGG00000021352	prpf38a	96	85.714	ENSOMEG00000016333	prpf38a	73	93.805	Oryzias_melastigma
ENSPMGG00000021352	prpf38a	99	78.641	ENSOGAG00000005423	PRPF38A	70	89.401	Otolemur_garnettii
ENSPMGG00000021352	prpf38a	99	78.641	ENSOARG00000005373	PRPF38A	70	89.401	Ovis_aries
ENSPMGG00000021352	prpf38a	93	65.862	ENSPPAG00000033867	-	67	70.833	Pan_paniscus
ENSPMGG00000021352	prpf38a	99	78.641	ENSPPAG00000030905	PRPF38A	70	89.401	Pan_paniscus
ENSPMGG00000021352	prpf38a	99	78.641	ENSPPRG00000013268	PRPF38A	70	89.401	Panthera_pardus
ENSPMGG00000021352	prpf38a	99	78.641	ENSPTIG00000015419	PRPF38A	70	89.401	Panthera_tigris_altaica
ENSPMGG00000021352	prpf38a	99	78.641	ENSPTRG00000000739	PRPF38A	73	89.401	Pan_troglodytes
ENSPMGG00000021352	prpf38a	99	78.641	ENSPANG00000015483	PRPF38A	70	89.401	Papio_anubis
ENSPMGG00000021352	prpf38a	99	82.623	ENSPKIG00000011439	prpf38a	84	79.151	Paramormyrops_kingsleyae
ENSPMGG00000021352	prpf38a	99	77.670	ENSPSIG00000017487	PRPF38A	81	81.496	Pelodiscus_sinensis
ENSPMGG00000021352	prpf38a	99	78.641	ENSPEMG00000023277	-	70	89.401	Peromyscus_maniculatus_bairdii
ENSPMGG00000021352	prpf38a	99	75.000	ENSPEMG00000011212	-	87	70.073	Peromyscus_maniculatus_bairdii
ENSPMGG00000021352	prpf38a	99	76.774	ENSPCIG00000022369	-	81	80.392	Phascolarctos_cinereus
ENSPMGG00000021352	prpf38a	78	93.363	ENSPLAG00000010328	prpf38a	71	90.000	Poecilia_latipinna
ENSPMGG00000021352	prpf38a	78	93.363	ENSPMEG00000011804	prpf38a	99	74.172	Poecilia_mexicana
ENSPMGG00000021352	prpf38a	64	95.745	ENSPREG00000002835	prpf38a	58	95.745	Poecilia_reticulata
ENSPMGG00000021352	prpf38a	99	70.701	ENSPPYG00000001348	PRPF38A	70	77.928	Pongo_abelii
ENSPMGG00000021352	prpf38a	99	78.317	ENSPCAG00000013328	PRPF38A	70	88.940	Procavia_capensis
ENSPMGG00000021352	prpf38a	99	78.641	ENSPCOG00000016387	-	70	89.401	Propithecus_coquereli
ENSPMGG00000021352	prpf38a	99	65.333	ENSPCOG00000020709	-	72	74.654	Propithecus_coquereli
ENSPMGG00000021352	prpf38a	99	78.641	ENSPVAG00000009803	PRPF38A	70	89.401	Pteropus_vampyrus
ENSPMGG00000021352	prpf38a	78	89.381	ENSPNAG00000010399	prpf38a	78	81.967	Pygocentrus_nattereri
ENSPMGG00000021352	prpf38a	99	78.964	ENSRNOG00000009451	Prpf38a	70	89.862	Rattus_norvegicus
ENSPMGG00000021352	prpf38a	99	78.641	ENSRBIG00000036442	PRPF38A	87	79.693	Rhinopithecus_bieti
ENSPMGG00000021352	prpf38a	98	69.463	ENSRROG00000040003	-	70	72.685	Rhinopithecus_roxellana
ENSPMGG00000021352	prpf38a	99	78.641	ENSRROG00000032788	PRPF38A	70	89.401	Rhinopithecus_roxellana
ENSPMGG00000021352	prpf38a	99	78.641	ENSSBOG00000019515	PRPF38A	70	89.401	Saimiri_boliviensis_boliviensis
ENSPMGG00000021352	prpf38a	85	73.783	ENSSHAG00000006906	-	78	77.358	Sarcophilus_harrisii
ENSPMGG00000021352	prpf38a	82	73.333	ENSSHAG00000006029	-	72	76.959	Sarcophilus_harrisii
ENSPMGG00000021352	prpf38a	76	87.838	ENSSFOG00015013572	prpf38a	84	79.231	Scleropages_formosus
ENSPMGG00000021352	prpf38a	61	97.674	ENSSARG00000014458	PRPF38A	70	66.359	Sorex_araneus
ENSPMGG00000021352	prpf38a	99	77.346	ENSSPUG00000013259	PRPF38A	81	79.134	Sphenodon_punctatus
ENSPMGG00000021352	prpf38a	78	75.111	ENSSPAG00000010449	prpf38a	66	74.419	Stegastes_partitus
ENSPMGG00000021352	prpf38a	99	78.641	ENSSSCG00000028288	PRPF38A	70	89.401	Sus_scrofa
ENSPMGG00000021352	prpf38a	99	75.081	ENSTGUG00000008995	PRPF38A	81	78.346	Taeniopygia_guttata
ENSPMGG00000021352	prpf38a	76	89.593	ENSTRUG00000003374	prpf38a	67	89.862	Takifugu_rubripes
ENSPMGG00000021352	prpf38a	79	88.312	ENSTBEG00000000725	PRPF38A	70	89.401	Tupaia_belangeri
ENSPMGG00000021352	prpf38a	99	78.641	ENSTTRG00000016139	PRPF38A	70	89.401	Tursiops_truncatus
ENSPMGG00000021352	prpf38a	99	78.641	ENSUAMG00000000625	PRPF38A	70	89.401	Ursus_americanus
ENSPMGG00000021352	prpf38a	99	78.641	ENSUMAG00000022674	PRPF38A	70	89.401	Ursus_maritimus
ENSPMGG00000021352	prpf38a	79	87.879	ENSVPAG00000000907	PRPF38A	70	88.940	Vicugna_pacos
ENSPMGG00000021352	prpf38a	99	78.641	ENSVVUG00000004475	PRPF38A	70	89.401	Vulpes_vulpes
ENSPMGG00000021352	prpf38a	76	86.878	ENSXETG00000008060	prpf38a	82	78.988	Xenopus_tropicalis
ENSPMGG00000021352	prpf38a	76	93.213	ENSXCOG00000007393	prpf38a	72	93.548	Xiphophorus_couchianus