EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000021646 (Gene tree)
Gene ID: -
Gene Symbol: srsf5b (1 of many)
Alias: -
Full Name: serine/arginine-rich splicing factor 5b
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 2173 bases
Position: chrKN461785.1:36478-38650
Accession: ZDB-GENE-040718-354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000026819	RRM_1	PF00076.22	4.3e-18	1	1
ENSPMGP00000026821	RRM_1	PF00076.22	6.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000028570	-	426	-	ENSPMGP00000026821	141 (aa)	-	-
ENSPMGT00000028568	-	450	-	ENSPMGP00000026819	149 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000021646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000021646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000021646	srsf5b	86	81.250	ENSG00000100650	SRSF5	100	79.231	Homo_sapiens
ENSPMGG00000021646	srsf5b	94	95.522	ENSACIG00000010742	srsf5b	84	95.522	Amphilophus_citrinellus
ENSPMGG00000021646	srsf5b	87	79.231	ENSANAG00000027977	-	91	77.863	Aotus_nancymaae
ENSPMGG00000021646	srsf5b	87	78.295	ENSANAG00000037529	-	98	75.758	Aotus_nancymaae
ENSPMGG00000021646	srsf5b	91	94.531	ENSAMXG00000011932	srsf5b	84	95.276	Astyanax_mexicanus
ENSPMGG00000021646	srsf5b	87	79.231	ENSCJAG00000014884	SRSF5	91	77.863	Callithrix_jacchus
ENSPMGG00000021646	srsf5b	87	80.000	ENSTSYG00000007786	SRSF5	95	75.362	Carlito_syrichta
ENSPMGG00000021646	srsf5b	87	79.231	ENSCCAG00000029002	SRSF5	91	77.863	Cebus_capucinus
ENSPMGG00000021646	srsf5b	87	79.231	ENSCATG00000045051	SRSF5	91	77.863	Cercocebus_atys
ENSPMGG00000021646	srsf5b	87	79.231	ENSCANG00000030560	SRSF5	91	77.863	Colobus_angolensis_palliatus
ENSPMGG00000021646	srsf5b	100	89.362	ENSDARG00000027734	srsf5b	92	93.893	Danio_rerio
ENSPMGG00000021646	srsf5b	91	60.465	ENSEBUG00000006229	srsf5b	55	47.170	Eptatretus_burgeri
ENSPMGG00000021646	srsf5b	87	80.000	ENSECAG00000026873	SRSF5	95	75.362	Equus_caballus
ENSPMGG00000021646	srsf5b	91	89.552	ENSELUG00000019852	srsf5b	89	80.667	Esox_lucius
ENSPMGG00000021646	srsf5b	87	80.000	ENSFCAG00000008848	SRSF5	95	75.362	Felis_catus
ENSPMGG00000021646	srsf5b	91	86.131	ENSGMOG00000000595	srsf5b	60	86.131	Gadus_morhua
ENSPMGG00000021646	srsf5b	94	72.932	ENSGALG00000009421	SRSF5	95	71.739	Gallus_gallus
ENSPMGG00000021646	srsf5b	98	81.507	ENSGACG00000007834	srsf5b	89	83.099	Gasterosteus_aculeatus
ENSPMGG00000021646	srsf5b	87	79.231	ENSGGOG00000016462	SRSF5	91	77.863	Gorilla_gorilla
ENSPMGG00000021646	srsf5b	91	95.312	ENSHBUG00000012462	srsf5b	93	95.312	Haplochromis_burtoni
ENSPMGG00000021646	srsf5b	95	93.284	ENSKMAG00000020486	srsf5b	86	95.385	Kryptolebias_marmoratus
ENSPMGG00000021646	srsf5b	87	79.231	ENSMFAG00000002393	SRSF5	91	77.863	Macaca_fascicularis
ENSPMGG00000021646	srsf5b	87	79.231	ENSMNEG00000030872	SRSF5	91	77.863	Macaca_nemestrina
ENSPMGG00000021646	srsf5b	87	79.231	ENSMLEG00000030017	SRSF5	91	77.863	Mandrillus_leucophaeus
ENSPMGG00000021646	srsf5b	52	91.781	ENSMICG00000046738	-	71	91.667	Microcebus_murinus
ENSPMGG00000021646	srsf5b	87	80.000	ENSMICG00000037432	-	95	75.362	Microcebus_murinus
ENSPMGG00000021646	srsf5b	93	95.455	ENSMMOG00000000137	srsf5b	96	79.851	Mola_mola
ENSPMGG00000021646	srsf5b	91	96.154	ENSMALG00000021875	srsf5b	88	91.852	Monopterus_albus
ENSPMGG00000021646	srsf5b	85	81.102	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSPMGG00000021646	srsf5b	87	79.231	ENSNLEG00000001615	SRSF5	91	77.863	Nomascus_leucogenys
ENSPMGG00000021646	srsf5b	87	79.231	ENSPPAG00000029921	SRSF5	91	77.863	Pan_paniscus
ENSPMGG00000021646	srsf5b	87	80.000	ENSPPRG00000012903	SRSF5	95	75.362	Panthera_pardus
ENSPMGG00000021646	srsf5b	87	80.000	ENSPTIG00000018589	SRSF5	95	75.362	Panthera_tigris_altaica
ENSPMGG00000021646	srsf5b	87	79.231	ENSPTRG00000006488	SRSF5	91	77.863	Pan_troglodytes
ENSPMGG00000021646	srsf5b	87	79.231	ENSPANG00000021091	SRSF5	91	77.863	Papio_anubis
ENSPMGG00000021646	srsf5b	91	57.664	ENSPMAG00000007790	srsf5b	52	47.205	Petromyzon_marinus
ENSPMGG00000021646	srsf5b	95	91.791	ENSPMEG00000012751	srsf5b	88	91.791	Poecilia_mexicana
ENSPMGG00000021646	srsf5b	85	80.315	ENSPCAG00000004405	SRSF5	84	78.906	Procavia_capensis
ENSPMGG00000021646	srsf5b	87	80.000	ENSPCOG00000014442	SRSF5	95	75.362	Propithecus_coquereli
ENSPMGG00000021646	srsf5b	93	95.420	ENSPNYG00000002669	srsf5b	96	95.420	Pundamilia_nyererei
ENSPMGG00000021646	srsf5b	91	93.750	ENSPNAG00000011262	srsf5b	84	94.488	Pygocentrus_nattereri
ENSPMGG00000021646	srsf5b	87	79.231	ENSRBIG00000013003	SRSF5	91	77.863	Rhinopithecus_bieti
ENSPMGG00000021646	srsf5b	87	79.231	ENSRROG00000043407	SRSF5	91	77.863	Rhinopithecus_roxellana
ENSPMGG00000021646	srsf5b	87	79.231	ENSSBOG00000030784	SRSF5	91	77.863	Saimiri_boliviensis_boliviensis
ENSPMGG00000021646	srsf5b	95	92.537	ENSSLDG00000023255	srsf5b	88	92.537	Seriola_lalandi_dorsalis
ENSPMGG00000021646	srsf5b	94	77.372	ENSSPUG00000002464	SRSF5	95	71.127	Sphenodon_punctatus
ENSPMGG00000021646	srsf5b	91	95.385	ENSXMAG00000026416	srsf5b	88	91.111	Xiphophorus_maculatus