EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000021833 (Gene tree)
Gene ID: -
Gene Symbol: smg7
Alias: -
Full Name: SMG7 nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 18459 bases
Position: chrKN467822.1:1064-19522
Accession: ZDB-GENE-030131-9122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000027046	EST1_DNA_bind	PF10373.9	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000028814	-	2199	-	ENSPMGP00000027046	732 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000021833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000021833's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000021833	smg7	79	70.796	ENSG00000116698	SMG7	59	57.000	Homo_sapiens
ENSPMGG00000021833	smg7	89	58.000	ENSAMEG00000002357	SMG7	59	57.500	Ailuropoda_melanoleuca
ENSPMGG00000021833	smg7	51	58.354	ENSACIG00000015152	smg7	72	50.500	Amphilophus_citrinellus
ENSPMGG00000021833	smg7	97	49.941	ENSAOCG00000013538	smg7	66	61.692	Amphiprion_ocellaris
ENSPMGG00000021833	smg7	97	49.822	ENSAPEG00000007851	smg7	66	61.692	Amphiprion_percula
ENSPMGG00000021833	smg7	97	49.643	ENSATEG00000006931	smg7	72	48.894	Anabas_testudineus
ENSPMGG00000021833	smg7	98	43.214	ENSAPLG00000015811	SMG7	71	42.193	Anas_platyrhynchos
ENSPMGG00000021833	smg7	92	51.152	ENSACAG00000014989	SMG7	59	52.074	Anolis_carolinensis
ENSPMGG00000021833	smg7	79	70.796	ENSANAG00000028114	SMG7	57	58.163	Aotus_nancymaae
ENSPMGG00000021833	smg7	97	50.300	ENSACLG00000022079	smg7	66	57.000	Astatotilapia_calliptera
ENSPMGG00000021833	smg7	93	53.846	ENSAMXG00000020809	smg7	71	46.523	Astyanax_mexicanus
ENSPMGG00000021833	smg7	89	54.000	ENSBTAG00000008003	SMG7	71	43.298	Bos_taurus
ENSPMGG00000021833	smg7	79	71.681	ENSCJAG00000005135	SMG7	57	59.896	Callithrix_jacchus
ENSPMGG00000021833	smg7	89	57.653	ENSCAFG00000013276	SMG7	54	57.653	Canis_familiaris
ENSPMGG00000021833	smg7	89	57.653	ENSCAFG00020015475	SMG7	57	57.653	Canis_lupus_dingo
ENSPMGG00000021833	smg7	89	54.500	ENSCHIG00000018192	SMG7	55	58.673	Capra_hircus
ENSPMGG00000021833	smg7	81	70.796	ENSTSYG00000002667	SMG7	59	57.000	Carlito_syrichta
ENSPMGG00000021833	smg7	89	58.000	ENSCPOG00000008906	SMG7	54	57.500	Cavia_porcellus
ENSPMGG00000021833	smg7	89	57.500	ENSCCAG00000028596	SMG7	59	58.163	Cebus_capucinus
ENSPMGG00000021833	smg7	89	57.500	ENSCATG00000011063	SMG7	59	57.000	Cercocebus_atys
ENSPMGG00000021833	smg7	89	57.653	ENSCLAG00000010751	SMG7	71	43.349	Chinchilla_lanigera
ENSPMGG00000021833	smg7	89	57.500	ENSCSAG00000012654	SMG7	54	57.000	Chlorocebus_sabaeus
ENSPMGG00000021833	smg7	89	55.838	ENSCPBG00000015724	SMG7	71	43.198	Chrysemys_picta_bellii
ENSPMGG00000021833	smg7	89	57.000	ENSCANG00000015680	SMG7	59	57.653	Colobus_angolensis_palliatus
ENSPMGG00000021833	smg7	89	54.000	ENSCGRG00001013705	Smg7	71	42.553	Cricetulus_griseus_chok1gshd
ENSPMGG00000021833	smg7	89	54.000	ENSCGRG00000018401	Smg7	72	42.553	Cricetulus_griseus_crigri
ENSPMGG00000021833	smg7	97	50.183	ENSCVAG00000011842	smg7	72	50.061	Cyprinodon_variegatus
ENSPMGG00000021833	smg7	94	53.363	ENSDARG00000060767	smg7	64	54.054	Danio_rerio
ENSPMGG00000021833	smg7	88	57.000	ENSDORG00000007331	Smg7	55	56.500	Dipodomys_ordii
ENSPMGG00000021833	smg7	89	56.500	ENSEASG00005006524	SMG7	55	56.000	Equus_asinus_asinus
ENSPMGG00000021833	smg7	89	57.000	ENSECAG00000004313	SMG7	57	56.500	Equus_caballus
ENSPMGG00000021833	smg7	96	44.823	ENSELUG00000010293	smg7	51	65.854	Esox_lucius
ENSPMGG00000021833	smg7	79	71.681	ENSFCAG00000010900	SMG7	73	41.787	Felis_catus
ENSPMGG00000021833	smg7	91	52.736	ENSFALG00000003047	SMG7	57	55.051	Ficedula_albicollis
ENSPMGG00000021833	smg7	89	57.500	ENSFDAG00000012121	SMG7	55	57.653	Fukomys_damarensis
ENSPMGG00000021833	smg7	97	48.144	ENSFHEG00000011073	smg7	71	48.492	Fundulus_heteroclitus
ENSPMGG00000021833	smg7	98	42.536	ENSGALG00000004667	SMG7	71	41.893	Gallus_gallus
ENSPMGG00000021833	smg7	97	48.561	ENSGAFG00000019000	smg7	71	48.441	Gambusia_affinis
ENSPMGG00000021833	smg7	86	51.857	ENSGACG00000001634	smg7	63	57.714	Gasterosteus_aculeatus
ENSPMGG00000021833	smg7	89	57.500	ENSGGOG00000002342	SMG7	59	57.000	Gorilla_gorilla
ENSPMGG00000021833	smg7	86	70.536	ENSHBUG00000003726	smg7	62	62.406	Haplochromis_burtoni
ENSPMGG00000021833	smg7	89	57.000	ENSHGLG00000009353	SMG7	71	43.602	Heterocephalus_glaber_female
ENSPMGG00000021833	smg7	89	57.000	ENSHGLG00100009637	-	71	43.483	Heterocephalus_glaber_male
ENSPMGG00000021833	smg7	89	45.729	ENSHGLG00100004878	-	54	47.692	Heterocephalus_glaber_male
ENSPMGG00000021833	smg7	92	56.373	ENSIPUG00000016997	smg7	62	57.843	Ictalurus_punctatus
ENSPMGG00000021833	smg7	89	58.000	ENSSTOG00000000401	SMG7	55	58.673	Ictidomys_tridecemlineatus
ENSPMGG00000021833	smg7	89	54.500	ENSJJAG00000012351	Smg7	54	56.500	Jaculus_jaculus
ENSPMGG00000021833	smg7	97	49.082	ENSKMAG00000004900	smg7	74	49.574	Kryptolebias_marmoratus
ENSPMGG00000021833	smg7	97	51.640	ENSLBEG00000002983	smg7	71	51.762	Labrus_bergylta
ENSPMGG00000021833	smg7	88	51.980	ENSLACG00000000972	SMG7	55	53.960	Latimeria_chalumnae
ENSPMGG00000021833	smg7	92	54.930	ENSLOCG00000002010	smg7	59	51.948	Lepisosteus_oculatus
ENSPMGG00000021833	smg7	89	56.500	ENSLAFG00000008186	SMG7	55	56.000	Loxodonta_africana
ENSPMGG00000021833	smg7	89	57.500	ENSMFAG00000031653	SMG7	59	57.000	Macaca_fascicularis
ENSPMGG00000021833	smg7	79	70.796	ENSMMUG00000018458	SMG7	71	43.632	Macaca_mulatta
ENSPMGG00000021833	smg7	89	57.500	ENSMNEG00000034798	SMG7	59	57.000	Macaca_nemestrina
ENSPMGG00000021833	smg7	89	57.500	ENSMLEG00000037170	SMG7	59	57.000	Mandrillus_leucophaeus
ENSPMGG00000021833	smg7	79	68.966	ENSMAMG00000018733	smg7	53	68.966	Mastacembelus_armatus
ENSPMGG00000021833	smg7	97	50.719	ENSMZEG00005015247	smg7	66	57.000	Maylandia_zebra
ENSPMGG00000021833	smg7	95	42.387	ENSMGAG00000001561	SMG7	70	41.484	Meleagris_gallopavo
ENSPMGG00000021833	smg7	89	53.500	ENSMAUG00000019484	Smg7	71	42.249	Mesocricetus_auratus
ENSPMGG00000021833	smg7	89	57.500	ENSMICG00000007145	SMG7	71	43.452	Microcebus_murinus
ENSPMGG00000021833	smg7	91	55.000	ENSMOCG00000020748	Smg7	71	42.385	Microtus_ochrogaster
ENSPMGG00000021833	smg7	97	49.697	ENSMMOG00000001524	smg7	71	49.818	Mola_mola
ENSPMGG00000021833	smg7	86	43.600	ENSMODG00000007139	SMG7	68	43.391	Monodelphis_domestica
ENSPMGG00000021833	smg7	96	58.416	ENSMALG00000000061	smg7	62	60.396	Monopterus_albus
ENSPMGG00000021833	smg7	89	54.000	MGP_CAROLIEiJ_G0014704	Smg7	71	42.604	Mus_caroli
ENSPMGG00000021833	smg7	89	54.000	ENSMUSG00000042772	Smg7	71	42.739	Mus_musculus
ENSPMGG00000021833	smg7	89	54.000	MGP_PahariEiJ_G0027940	Smg7	71	42.705	Mus_pahari
ENSPMGG00000021833	smg7	89	54.000	MGP_SPRETEiJ_G0015511	Smg7	71	42.739	Mus_spretus
ENSPMGG00000021833	smg7	89	57.000	ENSMPUG00000011732	SMG7	54	57.653	Mustela_putorius_furo
ENSPMGG00000021833	smg7	91	56.000	ENSMLUG00000015417	SMG7	55	55.612	Myotis_lucifugus
ENSPMGG00000021833	smg7	89	55.500	ENSNGAG00000009836	Smg7	71	43.262	Nannospalax_galili
ENSPMGG00000021833	smg7	97	49.517	ENSNBRG00000024343	smg7	74	49.396	Neolamprologus_brichardi
ENSPMGG00000021833	smg7	89	57.500	ENSNLEG00000018018	SMG7	59	57.000	Nomascus_leucogenys
ENSPMGG00000021833	smg7	89	58.163	ENSODEG00000010390	SMG7	71	43.365	Octodon_degus
ENSPMGG00000021833	smg7	97	49.821	ENSONIG00000000277	smg7	71	49.761	Oreochromis_niloticus
ENSPMGG00000021833	smg7	89	55.446	ENSOANG00000000994	SMG7	55	54.822	Ornithorhynchus_anatinus
ENSPMGG00000021833	smg7	91	52.041	ENSOCUG00000005887	SMG7	51	53.061	Oryctolagus_cuniculus
ENSPMGG00000021833	smg7	98	50.811	ENSORLG00000007314	smg7	70	50.744	Oryzias_latipes
ENSPMGG00000021833	smg7	98	50.936	ENSORLG00020015779	smg7	71	50.993	Oryzias_latipes_hni
ENSPMGG00000021833	smg7	98	50.687	ENSORLG00015012289	smg7	71	50.620	Oryzias_latipes_hsok
ENSPMGG00000021833	smg7	98	44.249	ENSOMEG00000002328	smg7	61	58.706	Oryzias_melastigma
ENSPMGG00000021833	smg7	89	54.000	ENSOARG00000001352	SMG7	54	58.163	Ovis_aries
ENSPMGG00000021833	smg7	89	57.500	ENSPPAG00000031619	SMG7	59	57.000	Pan_paniscus
ENSPMGG00000021833	smg7	81	71.681	ENSPPRG00000011222	SMG7	71	43.535	Panthera_pardus
ENSPMGG00000021833	smg7	81	71.681	ENSPTIG00000007242	SMG7	59	57.000	Panthera_tigris_altaica
ENSPMGG00000021833	smg7	79	70.796	ENSPTRG00000001764	SMG7	59	57.000	Pan_troglodytes
ENSPMGG00000021833	smg7	79	70.796	ENSPANG00000004520	SMG7	71	43.632	Papio_anubis
ENSPMGG00000021833	smg7	93	55.300	ENSPKIG00000007242	smg7	70	47.494	Paramormyrops_kingsleyae
ENSPMGG00000021833	smg7	89	57.513	ENSPSIG00000012201	SMG7	72	43.149	Pelodiscus_sinensis
ENSPMGG00000021833	smg7	89	54.000	ENSPEMG00000011315	Smg7	71	41.469	Peromyscus_maniculatus_bairdii
ENSPMGG00000021833	smg7	89	56.219	ENSPCIG00000003786	SMG7	71	43.223	Phascolarctos_cinereus
ENSPMGG00000021833	smg7	92	57.143	ENSPFOG00000019219	smg7	62	58.081	Poecilia_formosa
ENSPMGG00000021833	smg7	97	48.568	ENSPLAG00000001446	smg7	71	48.333	Poecilia_latipinna
ENSPMGG00000021833	smg7	87	49.934	ENSPMEG00000005218	smg7	68	48.768	Poecilia_mexicana
ENSPMGG00000021833	smg7	74	69.388	ENSPREG00000019039	smg7	52	69.388	Poecilia_reticulata
ENSPMGG00000021833	smg7	98	43.986	ENSPPYG00000000427	SMG7	71	43.632	Pongo_abelii
ENSPMGG00000021833	smg7	79	70.796	ENSPCOG00000011996	SMG7	55	57.000	Propithecus_coquereli
ENSPMGG00000021833	smg7	97	50.964	ENSPNYG00000007643	smg7	66	57.000	Pundamilia_nyererei
ENSPMGG00000021833	smg7	76	56.296	ENSPNAG00000011374	smg7	70	49.132	Pygocentrus_nattereri
ENSPMGG00000021833	smg7	89	54.271	ENSRNOG00000027962	Smg7	58	56.281	Rattus_norvegicus
ENSPMGG00000021833	smg7	89	57.000	ENSRBIG00000036316	SMG7	59	57.653	Rhinopithecus_bieti
ENSPMGG00000021833	smg7	89	57.000	ENSRROG00000035719	SMG7	59	57.653	Rhinopithecus_roxellana
ENSPMGG00000021833	smg7	89	56.633	ENSSBOG00000023454	SMG7	59	56.633	Saimiri_boliviensis_boliviensis
ENSPMGG00000021833	smg7	98	43.026	ENSSHAG00000013147	SMG7	71	42.503	Sarcophilus_harrisii
ENSPMGG00000021833	smg7	90	54.822	ENSSFOG00015017252	smg7	71	45.786	Scleropages_formosus
ENSPMGG00000021833	smg7	97	51.059	ENSSMAG00000006067	smg7	73	50.864	Scophthalmus_maximus
ENSPMGG00000021833	smg7	51	59.277	ENSSDUG00000017543	smg7	71	51.874	Seriola_dumerili
ENSPMGG00000021833	smg7	97	50.365	ENSSPAG00000008733	smg7	71	50.121	Stegastes_partitus
ENSPMGG00000021833	smg7	89	57.000	ENSSSCG00000015558	SMG7	55	57.653	Sus_scrofa
ENSPMGG00000021833	smg7	98	42.212	ENSTGUG00000003928	SMG7	72	41.955	Taeniopygia_guttata
ENSPMGG00000021833	smg7	97	53.810	ENSTNIG00000002802	smg7	55	55.024	Tetraodon_nigroviridis
ENSPMGG00000021833	smg7	98	41.617	ENSUAMG00000017473	SMG7	73	41.044	Ursus_americanus
ENSPMGG00000021833	smg7	89	57.500	ENSUMAG00000016389	SMG7	73	41.044	Ursus_maritimus
ENSPMGG00000021833	smg7	79	70.796	ENSVVUG00000008976	SMG7	55	57.653	Vulpes_vulpes
ENSPMGG00000021833	smg7	98	40.309	ENSXETG00000012528	smg7	72	39.405	Xenopus_tropicalis
ENSPMGG00000021833	smg7	97	48.086	ENSXMAG00000007123	smg7	71	48.091	Xiphophorus_maculatus