EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPMGG00000022027 (Gene tree)
Gene ID
-
Gene Symbol
pabpn1
Alias
-
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Periophthalmus_magnuspinnatus
Status
putative
Strand
Plus strand
Length
14498 bases
Position
chrKN461323.1:72735-87232
Accession
ZDB-GENE-040426-2401
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMGP00000027287RRM_1PF00076.222.9e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMGT00000029071-819-ENSPMGP00000027287272 (aa)--
Gene Model
Click here to download ENSPMGG00000022027's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000022027's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMGG00000022027pabpn18071.493ENSG00000258643BCL2L2-PABPN16671.493Homo_sapiens
ENSPMGG00000022027pabpn16981.959ENSG00000100836PABPN19281.410Homo_sapiens
ENSPMGG00000022027pabpn110092.958ENSAPOG00000016425pabpn19598.182Acanthochromis_polyacanthus
ENSPMGG00000022027pabpn16483.708ENSAMEG00000007048BCL2L2-PABPN19483.708Ailuropoda_melanoleuca
ENSPMGG00000022027pabpn110090.909ENSACIG00000021744pabpn19398.171Amphilophus_citrinellus
ENSPMGG00000022027pabpn18198.182ENSAOCG00000015805pabpn19598.182Amphiprion_ocellaris
ENSPMGG00000022027pabpn18198.182ENSAPEG00000009623pabpn19598.182Amphiprion_percula
ENSPMGG00000022027pabpn18198.636ENSATEG00000020531pabpn19598.636Anabas_testudineus
ENSPMGG00000022027pabpn16186.047ENSACAG00000006185-7672.444Anolis_carolinensis
ENSPMGG00000022027pabpn16882.979ENSANAG00000024513-8074.783Aotus_nancymaae
ENSPMGG00000022027pabpn110090.592ENSACLG00000016374pabpn110090.592Astatotilapia_calliptera
ENSPMGG00000022027pabpn110085.409ENSAMXG00000000452pabpn19597.285Astyanax_mexicanus
ENSPMGG00000022027pabpn16383.908ENSBTAG00000050594-7482.258Bos_taurus
ENSPMGG00000022027pabpn16583.333ENSBTAG00000053753-6783.333Bos_taurus
ENSPMGG00000022027pabpn16882.979ENSBTAG00000006884PABPN18469.048Bos_taurus
ENSPMGG00000022027pabpn15358.904WBGene00003904pabp-28655.000Caenorhabditis_elegans
ENSPMGG00000022027pabpn18075.113ENSCJAG00000007960-7975.566Callithrix_jacchus
ENSPMGG00000022027pabpn15679.487ENSCJAG00000004407-7879.487Callithrix_jacchus
ENSPMGG00000022027pabpn16981.959ENSCAFG00000011482PABPN18269.841Canis_familiaris
ENSPMGG00000022027pabpn16981.959ENSCAFG00020007298-8269.444Canis_lupus_dingo
ENSPMGG00000022027pabpn16981.959ENSCAFG00020006651-8269.444Canis_lupus_dingo
ENSPMGG00000022027pabpn16981.959ENSCHIG00000012184PABPN18269.444Capra_hircus
ENSPMGG00000022027pabpn18071.493ENSTSYG00000033996BCL2L2-PABPN18781.410Carlito_syrichta
ENSPMGG00000022027pabpn15181.295ENSCAPG00000009461-9981.295Cavia_aperea
ENSPMGG00000022027pabpn16981.443ENSCPOG00000025574PABPN18268.651Cavia_porcellus
ENSPMGG00000022027pabpn18075.113ENSCCAG00000033954BCL2L2-PABPN17975.566Cebus_capucinus
ENSPMGG00000022027pabpn18075.113ENSCATG00000038536BCL2L2-PABPN17975.566Cercocebus_atys
ENSPMGG00000022027pabpn15181.295ENSCLAG00000012423PABPN18553.091Chinchilla_lanigera
ENSPMGG00000022027pabpn16980.412ENSCSAG00000016036PABPN18268.254Chlorocebus_sabaeus
ENSPMGG00000022027pabpn17271.717ENSCHOG00000004798BCL2L2-PABPN18769.712Choloepus_hoffmanni
ENSPMGG00000022027pabpn15683.974ENSCPBG00000026060-8783.974Chrysemys_picta_bellii
ENSPMGG00000022027pabpn16859.709ENSCING00000012468-8464.500Ciona_intestinalis
ENSPMGG00000022027pabpn15661.272ENSCSAVG00000002001-8765.385Ciona_savignyi
ENSPMGG00000022027pabpn18071.493ENSCANG00000009750BCL2L2-PABPN18781.410Colobus_angolensis_palliatus
ENSPMGG00000022027pabpn16771.277ENSCANG00000030980-8364.035Colobus_angolensis_palliatus
ENSPMGG00000022027pabpn16981.443ENSCGRG00001019696Pabpn18780.769Cricetulus_griseus_chok1gshd
ENSPMGG00000022027pabpn15390.476ENSCGRG00000011102Pabpn19190.476Cricetulus_griseus_crigri
ENSPMGG00000022027pabpn18692.975ENSCSEG00000008774pabpn19795.045Cynoglossus_semilaevis
ENSPMGG00000022027pabpn110086.395ENSCVAG00000003152pabpn19595.946Cyprinodon_variegatus
ENSPMGG00000022027pabpn16256.805ENSDARG00000087996pabpn1l8659.864Danio_rerio
ENSPMGG00000022027pabpn110092.254ENSDARG00000045373pabpn110097.727Danio_rerio
ENSPMGG00000022027pabpn16981.959ENSDNOG00000023682PABPN18269.444Dasypus_novemcinctus
ENSPMGG00000022027pabpn16981.443ENSDORG00000028966-8269.048Dipodomys_ordii
ENSPMGG00000022027pabpn17858.559FBgn0005648Pabp29758.559Drosophila_melanogaster
ENSPMGG00000022027pabpn18071.111ENSEBUG00000002322pabpn19671.111Eptatretus_burgeri
ENSPMGG00000022027pabpn16981.959ENSEASG00005011716PABPN18269.444Equus_asinus_asinus
ENSPMGG00000022027pabpn16982.051ENSECAG00000011652PABPN18569.565Equus_caballus
ENSPMGG00000022027pabpn17178.000ENSEEUG00000012973-6977.833Erinaceus_europaeus
ENSPMGG00000022027pabpn17893.088ENSELUG00000022654pabpn19593.333Esox_lucius
ENSPMGG00000022027pabpn16981.959ENSFCAG00000031922PABPN18269.444Felis_catus
ENSPMGG00000022027pabpn15680.769ENSFDAG00000018381BCL2L2-PABPN18780.769Fukomys_damarensis
ENSPMGG00000022027pabpn18195.909ENSFHEG00000007215pabpn19595.909Fundulus_heteroclitus
ENSPMGG00000022027pabpn110088.070ENSGMOG00000003922pabpn110090.877Gadus_morhua
ENSPMGG00000022027pabpn16483.146ENSGALG00000052930-5882.412Gallus_gallus
ENSPMGG00000022027pabpn18197.297ENSGAFG00000017099pabpn19597.297Gambusia_affinis
ENSPMGG00000022027pabpn110092.254ENSGACG00000002167pabpn110092.254Gasterosteus_aculeatus
ENSPMGG00000022027pabpn17268.182ENSGGOG00000039675-8764.348Gorilla_gorilla
ENSPMGG00000022027pabpn18075.113ENSGGOG00000022683-7975.566Gorilla_gorilla
ENSPMGG00000022027pabpn17565.315ENSGGOG00000025919-9067.883Gorilla_gorilla
ENSPMGG00000022027pabpn18197.727ENSHBUG00000019523pabpn19597.727Haplochromis_burtoni
ENSPMGG00000022027pabpn16981.443ENSHGLG00000002927-9290.476Heterocephalus_glaber_female
ENSPMGG00000022027pabpn15663.399ENSHGLG00000009842-8763.399Heterocephalus_glaber_female
ENSPMGG00000022027pabpn16774.468ENSHGLG00000018588-7074.468Heterocephalus_glaber_female
ENSPMGG00000022027pabpn16774.468ENSHGLG00100015565-8765.502Heterocephalus_glaber_male
ENSPMGG00000022027pabpn18071.041ENSHGLG00100006673-9290.476Heterocephalus_glaber_male
ENSPMGG00000022027pabpn18197.273ENSHCOG00000004655pabpn19597.273Hippocampus_comes
ENSPMGG00000022027pabpn18198.636ENSIPUG00000008085PABPN19598.636Ictalurus_punctatus
ENSPMGG00000022027pabpn17889.623ENSIPUG00000000180-9986.580Ictalurus_punctatus
ENSPMGG00000022027pabpn15681.410ENSSTOG00000029847BCL2L2-PABPN18781.410Ictidomys_tridecemlineatus
ENSPMGG00000022027pabpn15681.410ENSJJAG00000023507Gm205218781.410Jaculus_jaculus
ENSPMGG00000022027pabpn110091.930ENSKMAG00000018748pabpn110091.930Kryptolebias_marmoratus
ENSPMGG00000022027pabpn110093.662ENSLBEG00000027266pabpn110093.662Labrus_bergylta
ENSPMGG00000022027pabpn16488.202ENSLACG00000000646pabpn19476.818Latimeria_chalumnae
ENSPMGG00000022027pabpn110087.368ENSLOCG00000000796pabpn110087.719Lepisosteus_oculatus
ENSPMGG00000022027pabpn16867.539ENSLOCG00000004694pabpn1l9366.337Lepisosteus_oculatus
ENSPMGG00000022027pabpn15182.014ENSLAFG00000031227-9182.014Loxodonta_africana
ENSPMGG00000022027pabpn18071.493ENSMFAG00000032183BCL2L2-PABPN18781.410Macaca_fascicularis
ENSPMGG00000022027pabpn18071.493ENSMMUG00000014747BCL2L2-PABPN19281.481Macaca_mulatta
ENSPMGG00000022027pabpn16867.553ENSMMUG00000048382-6567.172Macaca_mulatta
ENSPMGG00000022027pabpn18075.113ENSMNEG00000045065BCL2L2-PABPN17975.566Macaca_nemestrina
ENSPMGG00000022027pabpn16367.429ENSMNEG00000035750-9073.077Macaca_nemestrina
ENSPMGG00000022027pabpn15666.242ENSMLEG00000034623-9271.970Mandrillus_leucophaeus
ENSPMGG00000022027pabpn18071.493ENSMLEG00000043862BCL2L2-PABPN18781.410Mandrillus_leucophaeus
ENSPMGG00000022027pabpn110092.908ENSMAMG00000007979pabpn110092.908Mastacembelus_armatus
ENSPMGG00000022027pabpn110092.254ENSMZEG00005011904pabpn110092.254Maylandia_zebra
ENSPMGG00000022027pabpn18071.493ENSMAUG00000007383Gm205218369.600Mesocricetus_auratus
ENSPMGG00000022027pabpn18075.566ENSMICG00000010002BCL2L2-PABPN17976.339Microcebus_murinus
ENSPMGG00000022027pabpn18071.041ENSMOCG00000018557Gm205219090.476Microtus_ochrogaster
ENSPMGG00000022027pabpn110092.606ENSMMOG00000005405pabpn19598.182Mola_mola
ENSPMGG00000022027pabpn16979.275ENSMODG00000004535-8269.048Monodelphis_domestica
ENSPMGG00000022027pabpn110092.606ENSMALG00000019612pabpn110092.606Monopterus_albus
ENSPMGG00000022027pabpn16980.412MGP_CAROLIEiJ_G0019277Pabpn19982.209Mus_caroli
ENSPMGG00000022027pabpn18070.588MGP_CAROLIEiJ_G0019276Gm205216670.588Mus_caroli
ENSPMGG00000022027pabpn18071.041ENSMUSG00000092232Gm205216671.041Mus_musculus
ENSPMGG00000022027pabpn16980.928ENSMUSG00000022194Pabpn19982.209Mus_musculus
ENSPMGG00000022027pabpn18071.041MGP_PahariEiJ_G0030294Gm205216671.041Mus_pahari
ENSPMGG00000022027pabpn16980.928MGP_PahariEiJ_G0030295Pabpn110092.857Mus_pahari
ENSPMGG00000022027pabpn16980.928MGP_SPRETEiJ_G0020166Pabpn19982.209Mus_spretus
ENSPMGG00000022027pabpn18071.041MGP_SPRETEiJ_G0020165Gm205216671.041Mus_spretus
ENSPMGG00000022027pabpn15681.410ENSMPUG00000006775-9281.410Mustela_putorius_furo
ENSPMGG00000022027pabpn16482.584ENSMLUG00000003800-9482.584Myotis_lucifugus
ENSPMGG00000022027pabpn16780.645ENSMLUG00000028677-8072.321Myotis_lucifugus
ENSPMGG00000022027pabpn16779.679ENSMLUG00000012452-6578.788Myotis_lucifugus
ENSPMGG00000022027pabpn18071.946ENSNGAG00000019529Gm205216671.946Nannospalax_galili
ENSPMGG00000022027pabpn110092.606ENSNBRG00000023955pabpn110092.606Neolamprologus_brichardi
ENSPMGG00000022027pabpn18071.493ENSNLEG00000015007-7081.726Nomascus_leucogenys
ENSPMGG00000022027pabpn16670.053ENSNLEG00000030598-7770.000Nomascus_leucogenys
ENSPMGG00000022027pabpn18071.041ENSODEG00000002083BCL2L2-PABPN18268.651Octodon_degus
ENSPMGG00000022027pabpn16973.298ENSODEG00000003739-8364.050Octodon_degus
ENSPMGG00000022027pabpn15873.620ENSODEG00000011555-8172.368Octodon_degus
ENSPMGG00000022027pabpn110092.606ENSONIG00000008112pabpn110092.606Oreochromis_niloticus
ENSPMGG00000022027pabpn16981.443ENSOCUG00000016174PABPN19069.323Oryctolagus_cuniculus
ENSPMGG00000022027pabpn110092.606ENSORLG00000027900pabpn110092.606Oryzias_latipes
ENSPMGG00000022027pabpn110090.068ENSORLG00020004681pabpn110090.068Oryzias_latipes_hni
ENSPMGG00000022027pabpn110090.068ENSORLG00015000018pabpn19598.182Oryzias_latipes_hsok
ENSPMGG00000022027pabpn110093.310ENSOMEG00000016618pabpn110093.310Oryzias_melastigma
ENSPMGG00000022027pabpn16981.959ENSOGAG00000008710PABPN18269.444Otolemur_garnettii
ENSPMGG00000022027pabpn18071.493ENSOARG00000019336BCL2L2-PABPN16171.493Ovis_aries
ENSPMGG00000022027pabpn18071.493ENSPPAG00000028984BCL2L2-PABPN19281.410Pan_paniscus
ENSPMGG00000022027pabpn15766.026ENSPPAG00000039421-8766.026Pan_paniscus
ENSPMGG00000022027pabpn16981.959ENSPPRG00000010567PABPN18269.444Panthera_pardus
ENSPMGG00000022027pabpn15681.410ENSPTIG00000001063BCL2L2-PABPN18781.410Panthera_tigris_altaica
ENSPMGG00000022027pabpn18262.054ENSPTRG00000047273-8959.504Pan_troglodytes
ENSPMGG00000022027pabpn18075.113ENSPTRG00000006167BCL2L27975.566Pan_troglodytes
ENSPMGG00000022027pabpn16868.085ENSPANG00000023326-9073.846Papio_anubis
ENSPMGG00000022027pabpn18075.113ENSPANG00000021100BCL2L2-PABPN17975.566Papio_anubis
ENSPMGG00000022027pabpn110090.493ENSPKIG00000008144-10090.493Paramormyrops_kingsleyae
ENSPMGG00000022027pabpn110084.859ENSPKIG00000018052pabpn19892.208Paramormyrops_kingsleyae
ENSPMGG00000022027pabpn16070.122ENSPKIG00000008340pabpn1l8667.598Paramormyrops_kingsleyae
ENSPMGG00000022027pabpn18071.493ENSPEMG00000008332Gm205218990.476Peromyscus_maniculatus_bairdii
ENSPMGG00000022027pabpn16774.731ENSPMAG00000006212pabpn19468.376Petromyzon_marinus
ENSPMGG00000022027pabpn16979.275ENSPCIG00000027751-8269.048Phascolarctos_cinereus
ENSPMGG00000022027pabpn110089.116ENSPFOG00000010351pabpn19496.847Poecilia_formosa
ENSPMGG00000022027pabpn110091.608ENSPLAG00000022696pabpn110091.608Poecilia_latipinna
ENSPMGG00000022027pabpn18196.847ENSPMEG00000020856pabpn19596.847Poecilia_mexicana
ENSPMGG00000022027pabpn110090.909ENSPREG00000011278pabpn19597.297Poecilia_reticulata
ENSPMGG00000022027pabpn16981.959ENSPPYG00000005663PABPN18969.444Pongo_abelii
ENSPMGG00000022027pabpn16769.271ENSPCAG00000005902PABPN18459.600Procavia_capensis
ENSPMGG00000022027pabpn18075.566ENSPCOG00000028047BCL2L2-PABPN17976.339Propithecus_coquereli
ENSPMGG00000022027pabpn17080.203ENSPVAG00000005270PABPN18268.526Pteropus_vampyrus
ENSPMGG00000022027pabpn18197.727ENSPNYG00000013182pabpn19597.727Pundamilia_nyererei
ENSPMGG00000022027pabpn15868.987ENSPNAG00000021666pabpn1l9565.128Pygocentrus_nattereri
ENSPMGG00000022027pabpn110090.877ENSPNAG00000023526pabpn19597.273Pygocentrus_nattereri
ENSPMGG00000022027pabpn16981.443ENSRNOG00000042195Pabpn18169.600Rattus_norvegicus
ENSPMGG00000022027pabpn16774.332ENSRBIG00000042811-8770.244Rhinopithecus_bieti
ENSPMGG00000022027pabpn18071.493ENSRBIG00000040762BCL2L2-PABPN16871.493Rhinopithecus_bieti
ENSPMGG00000022027pabpn17271.000ENSRBIG00000039547-7866.038Rhinopithecus_bieti
ENSPMGG00000022027pabpn16967.164ENSRROG00000036409-6963.063Rhinopithecus_roxellana
ENSPMGG00000022027pabpn18071.493ENSRROG00000045535BCL2L2-PABPN18781.410Rhinopithecus_roxellana
ENSPMGG00000022027pabpn17666.038ENSRROG00000040409-7866.038Rhinopithecus_roxellana
ENSPMGG00000022027pabpn18067.521ENSSBOG00000026930BCL2L2-PABPN19281.410Saimiri_boliviensis_boliviensis
ENSPMGG00000022027pabpn16480.791ENSSHAG00000014841-8183.146Sarcophilus_harrisii
ENSPMGG00000022027pabpn18061.062ENSSHAG00000007707-9461.062Sarcophilus_harrisii
ENSPMGG00000022027pabpn110084.561ENSSFOG00015012565pabpn110084.561Scleropages_formosus
ENSPMGG00000022027pabpn18196.818ENSSFOG00015014718pabpn19596.818Scleropages_formosus
ENSPMGG00000022027pabpn16765.027ENSSFOG00015015833pabpn1l8466.120Scleropages_formosus
ENSPMGG00000022027pabpn110092.606ENSSMAG00000020157pabpn19598.182Scophthalmus_maximus
ENSPMGG00000022027pabpn110092.958ENSSDUG00000020582pabpn110092.958Seriola_dumerili
ENSPMGG00000022027pabpn18198.636ENSSLDG00000007118pabpn19598.636Seriola_lalandi_dorsalis
ENSPMGG00000022027pabpn15385.616ENSSPUG00000018308-8783.974Sphenodon_punctatus
ENSPMGG00000022027pabpn110091.930ENSSPAG00000021658pabpn110091.930Stegastes_partitus
ENSPMGG00000022027pabpn17166.154ENSSSCG00000034805-7562.234Sus_scrofa
ENSPMGG00000022027pabpn18071.493ENSSSCG00000002023PABPN18269.444Sus_scrofa
ENSPMGG00000022027pabpn110092.254ENSTRUG00000023664pabpn110092.254Takifugu_rubripes
ENSPMGG00000022027pabpn17497.015ENSTNIG00000005369pabpn19397.015Tetraodon_nigroviridis
ENSPMGG00000022027pabpn16981.959ENSUAMG00000024460PABPN16481.726Ursus_americanus
ENSPMGG00000022027pabpn18071.493ENSUMAG00000014288BCL2L2-PABPN16671.493Ursus_maritimus
ENSPMGG00000022027pabpn18071.493ENSVVUG00000019912BCL2L2-PABPN17182.418Vulpes_vulpes
ENSPMGG00000022027pabpn16786.413ENSXETG00000014597pabpn16982.843Xenopus_tropicalis
ENSPMGG00000022027pabpn15984.663ENSXCOG00000005158pabpn19184.663Xiphophorus_couchianus
ENSPMGG00000022027pabpn110089.796ENSXMAG00000006196pabpn19597.748Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us